Basic Information

Insect: Elegia similella
Gene Symbol: -
Assembly: GCA_947532085.1
Location: OX383950.1:16134352-16141937[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.46 2.6e+02 2.6 1.6 5 38 210 244 208 245 0.92

2 19 0.69 3.9e+02 2.0 0.5 17 29 250 262 245 273 0.78

3 19 0.00013 0.076 13.9 1.3 16 41 277 299 267 301 0.86

4 19 0.016 9 7.2 0.9 17 41 306 327 298 329 0.77

5 19 0.068 38 5.2 2.5 17 41 334 355 329 356 0.80

6 19 0.26 1.5e+02 3.4 0.5 18 41 363 383 360 385 0.82

7 19 0.013 7.5 7.5 3.8 14 41 387 411 379 413 0.83

8 19 0.87 4.9e+02 1.7 7.0 3 41 405 439 403 443 0.75

9 19 0.12 69 4.4 1.7 13 41 442 467 439 472 0.77

10 19 0.0095 5.3 8.0 3.3 14 41 471 495 463 497 0.83

11 19 0.017 9.7 7.1 1.8 3 41 489 523 487 525 0.79

12 19 0.015 8.5 7.3 1.3 13 41 526 551 515 553 0.79

13 19 0.0036 2 9.3 0.7 17 41 558 579 552 581 0.89

14 19 0.028 16 6.5 2.4 17 41 586 607 580 609 0.76

15 19 0.03 17 6.4 1.9 14 41 611 635 601 637 0.82

16 19 0.0022 1.2 10.0 2.4 14 41 639 663 631 665 0.83

17 19 0.0016 0.92 10.4 1.2 17 41 670 691 664 693 0.84

18 19 0.22 1.3e+02 3.6 3.5 17 41 698 719 691 721 0.80

19 19 0.025 14 6.6 1.2 17 41 726 747 720 748 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.46	2.6e+02	2.6	1.6	5	38	210	244	208	245	0.92
2	19	0.69	3.9e+02	2.0	0.5	17	29	250	262	245	273	0.78
3	19	0.00013	0.076	13.9	1.3	16	41	277	299	267	301	0.86
4	19	0.016	9	7.2	0.9	17	41	306	327	298	329	0.77
5	19	0.068	38	5.2	2.5	17	41	334	355	329	356	0.80
6	19	0.26	1.5e+02	3.4	0.5	18	41	363	383	360	385	0.82
7	19	0.013	7.5	7.5	3.8	14	41	387	411	379	413	0.83
8	19	0.87	4.9e+02	1.7	7.0	3	41	405	439	403	443	0.75
9	19	0.12	69	4.4	1.7	13	41	442	467	439	472	0.77
10	19	0.0095	5.3	8.0	3.3	14	41	471	495	463	497	0.83
11	19	0.017	9.7	7.1	1.8	3	41	489	523	487	525	0.79
12	19	0.015	8.5	7.3	1.3	13	41	526	551	515	553	0.79
13	19	0.0036	2	9.3	0.7	17	41	558	579	552	581	0.89
14	19	0.028	16	6.5	2.4	17	41	586	607	580	609	0.76
15	19	0.03	17	6.4	1.9	14	41	611	635	601	637	0.82
16	19	0.0022	1.2	10.0	2.4	14	41	639	663	631	665	0.83
17	19	0.0016	0.92	10.4	1.2	17	41	670	691	664	693	0.84
18	19	0.22	1.3e+02	3.6	3.5	17	41	698	719	691	721	0.80
19	19	0.025	14	6.6	1.2	17	41	726	747	720	748	0.77

Sequence Information

Coding Sequence: ATGCATCAGAGTCCAGCATTTTGCCGTATCTGCCTCGCAGTGGACGCGCCCATATTCAACATTGACGACACTGCCCTGCAACTCGTGTACGAGAGGCTGACGGGGGCTTTTCTCGTTGAAGGGAACAGGCCCGTGGCGGCATGCTACATCTGCCGCGCTATGCTGTACAAGAGCCACAAGCTGATGGTGACTGCTACCAGGGCAGACCATGCGCTGACTGCTATGTTGGAGACGGCTGGCGAGATTACAGAAAAGTCGATATCCCTGATTGACCGCGAGGCCATTGGCTTGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCCGCCCGCCAGGGTCGCGGTCAAAACCGAGCCGGAGTCACAGGATGCTTTTGACACTGCGACAGACAATGAGGGTCCAGCAGGCGTTCCCGCGGCTGACGTGGACGAGACACGGGACTCCGATGAAGACGCGGGGGCGCGGGGCGGGGGACACTACGCGGACGGCGTTCCCGCGGCTGACGTGGACGAGACACGGGACTCCGATGAAGACGCGGGGGCGCGGGGCGGGGGACACTACGCGGACGATGGCGCAGCAGAGGGCCAACAGCCTGTGGCAGGAAGTTCCCGACACAGTTATTATGGCGAGCCTCAGAGCGCTGACACAAGGCaccagtgtcatgtttgtctgagggggtttcagaggaagagacatctacaaatatgcttgagaacgcacactggtgagaagctgtataattgtaatagctgtgggaagcaattttatcagaagagtgatttagacagacagttaagaacacacactggtgaaaaaccatttaagtgtaatgtttgcgaaaagcagtttagtaacaaaagctctttaaaaactcatttaagaactcacactggtgagaagccgtataaatgtaatgattgtggcaagcaatttaatcaaaagggtactttacaatcacatttaagaacacacactggtgagaaaccatttgaatgtaatgtttgtcgtcgtcgatttgctcacagcaatacattgacaaaacatctgagaactcacactggtgtgaagccgtataaatgttatgattgtggcaagcaatttaatcaaaagcgtactttagaatcacatttaagaacacacactggtgagaaaccatttgaatgtaatgtctgcgaaaagcagttcagtcacaaaagtaaattaaaagttcatttaagaactcacactggtgagaaaccatttgagtgtaaggtttgtcgacgtcgatttgctcacagcaatacattgacaaaacatctgagaactcacacttgtgagaagccgtataaatgtaatgattgtggcaagcaattttatcaaaagggtactttagaatcacatttaagaacacacactggtgagaaaccatttgaatgtaatgtttgcgaaaagcagttcagtcacaaaagtaaattaaaagttcatttaagaactcacactggtgagaaaccatttgagtgtaatgtttgcgaaaagcagtttcgtgacaaaagctattttaaaactcatttaagaacacacactggtgagaaaccatataaatgtaatagctgtgggaagcaattttatcagaagagtgatttagacagacatttaagaacacacactggtgaaaaaccatataaatgtaatagctgtgggaagcaattttatcggaagagtgatttagacagacatttaagaacacacactggtgaaaaaccatttaagtgtaatgtttgcgaaaagcagtttagtgacaaatgctatttaaaaactcatttaagaactcacactggtgagaaaccatataaatgtaatagctgtgggaagcaattttatcagaagagtgatttagacagacatttaagaacacacactggtgaaaaaccatttaagtgtaatgtttgtgaaaagcagtttagtgacaaaagctatttaaaaactcatttaagaactcacactggtgagaagccgtataaatgtaatgtttgtggcaagcaatttaataaaaagggtaatttagaatcacatttaagaacacacactggtgagaaaccatttgaatgtaaggtttgtcgacgtcgatttgctcacagcaatacattgacaaagcatctgagaactcacactggtgagaagccgtataaatgtaatgattgtggcaagcaatttaataaaaagggtactttacaatcacatttaagaacacatactggtgagaaaccatttgaatga
Protein Sequence: MHQSPAFCRICLAVDAPIFNIDDTALQLVYERLTGAFLVEGNRPVAACYICRAMLYKSHKLMVTATRADHALTAMLETAGEITEKSISLIDREAIGLCASLSFSVAECCDSTPPARVAVKTEPESQDAFDTATDNEGPAGVPAADVDETRDSDEDAGARGGGHYADGVPAADVDETRDSDEDAGARGGGHYADDGAAEGQQPVAGSSRHSYYGEPQSADTRHQCHVCLRGFQRKRHLQICLRTHTGEKLYNCNSCGKQFYQKSDLDRQLRTHTGEKPFKCNVCEKQFSNKSSLKTHLRTHTGEKPYKCNDCGKQFNQKGTLQSHLRTHTGEKPFECNVCRRRFAHSNTLTKHLRTHTGVKPYKCYDCGKQFNQKRTLESHLRTHTGEKPFECNVCEKQFSHKSKLKVHLRTHTGEKPFECKVCRRRFAHSNTLTKHLRTHTCEKPYKCNDCGKQFYQKGTLESHLRTHTGEKPFECNVCEKQFSHKSKLKVHLRTHTGEKPFECNVCEKQFRDKSYFKTHLRTHTGEKPYKCNSCGKQFYQKSDLDRHLRTHTGEKPYKCNSCGKQFYRKSDLDRHLRTHTGEKPFKCNVCEKQFSDKCYLKTHLRTHTGEKPYKCNSCGKQFYQKSDLDRHLRTHTGEKPFKCNVCEKQFSDKSYLKTHLRTHTGEKPYKCNVCGKQFNKKGNLESHLRTHTGEKPFECKVCRRRFAHSNTLTKHLRTHTGEKPYKCNDCGKQFNKKGTLQSHLRTHTGEKPFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00640658;
90% Identity: iTF_00640658;
80% Identity: iTF_00640648;