Esim030927.1
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- Hr39
- Assembly
- GCA_947532085.1
- Location
- OX383927.1:25712260-25726418[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.15 1.6e+03 -1.0 1.0 101 201 62 172 4 182 0.48 2 4 3 3.2e+04 -5.3 8.8 82 175 228 320 163 365 0.50 3 4 9e-08 0.00098 19.5 0.1 1 20 443 462 443 474 0.92 4 4 1.9e-66 2e-62 212.8 0.0 152 408 497 762 473 762 0.85
Sequence Information
- Coding Sequence
- ATGTCGAGTGAGGCAGACGCGGTGAAGGTGGAAGGAGTCCACGTTTCAGTAACCACTATCAGCATGACGGGACCGGAGACGAGCAATGTTCAATTCTCGTATAGTTCGAGCGGCGTTCGTATCAGTGTGTCTTCAGATCCACACGATGAAGACTCCACTGATGCTGAAATCTCGAAGATCGACTTCAATCAACATCAATACGAGGTAAACATGCGCAACAAGAAAAAGCGGTCGTCTAGCGGTACTCAGTGCGACAGCCAGAGCAACGACAGAGAGCGACCGATGTCTTGGGAGGGCGAGCTGTCGGACTCGGAAATGGTTATCGATACGAGTGTCAATAACGACGAAAACAGCAGCTCCTTAGACCTCCAATCGTCACGCGACTCCATCGATACGCTTCGAAATGTGACTATCAAGACGGAGCCATTGAAGACAGAGGCCTTCCAATGCGTAGATGATCAGAGAGTGCTGGATCTAAAGTATTCGGCACCATTACAGCCGCACCAGAGGAGCCATAGTATGAACAGGATATCGGTCCTCACAGACAACTCTCCCCTCTCGCTCGCGCGGCGGCCGACTTCTCCAACGAACAGTGCCAAATCCCTCGGCCTCAACGACCAGAACACGGTGCCAATGATGCCGCAGACCTCTTTGGGTGAAGTCCAGAACTTGACCATAAAGAAAGAGACGCAGCTTTCAGAACTGAAATGCGAGCCATCAGTGGGCATGGACAAGTTGTTGGGTGCGCTACACGGCTCCCCACTGCTGGGCCGCTTGCCCAGAGTGCAATCCAGTGCCAGTACCGACTCCGCAGTGCATTCCATGTACACCCACAGTGTGTACAGCAGTCCTTCAGCCAGTCCCAGAGCTTCGCGGCACTACACTCCTTCTCTTTCCCGTAACAACAGTGATGCCTCTCACTCTTCCTGCTACTCGTATAGTTCAGAATTCTCCCCTACGCATTCTCCAGTACAGGGACGACATCCCCACGTGGTGTATCGTGAAGCAGCAGCGCCTATGTTCCCCGCCTCTCCGGCACATGACGAGGATGCAGACACAACGGACGAAAGACTACATCACCATCAGGGCATCAGCAGACAACAACTTATCAACAGTCCATGTCCTATCTGTGGAGACAAGATCAGCGGCTTCCACTACGGGATATTCTCCTGCGAGTCCTGCAAGGGTTTCTTCAAGCGCACCGTTCAGAACCGCAAGAACTACATGTGTCTGAGAGGAGGAAACTGTCCAGTGACTGTCGCTACGCGGAAGAAGTGTCCGGCATGCAGATTTGACAAGTGTCTCGGATGTGGGATGAAGCTTGAAGCGATACGCGAGGACCGTACGCGAGGAGGCCGATCAACATACCAGTGTTCTTACTCGTTATCAGGGGCGTCGTCCACAGGCTCACTGCTGTCAGCACATGTCCCTACTACGTTACGGCACGCGTCCTCGCTTACTTGCGTGAACGGCCCAGGTTCATACACAAATAGCAGAGGAGAGTCGAGTAACAGTCGGCTAACGCCAGACATACCACCATTATTACAGGAAATAATGGAAGTAGAACACCTCTGGCAGTATAATGAGTCCGAGCTCAACCGGCTAGGAAAGTCCACTGGTAGTCCGTCCGCCAACCCACTACTTGCAGCCAGTGGTATCACCGCGCAAAATTCTAGCCCTGACTTCCTGGCAGACCTGTGTAACATCGCGGACCACAGACTATATAAAATAGTCAAGTGGTGTAAGAGTCTCCCGCTTTTCAAGAATATTTCCATCGACGACCAAATCTGCCTGCTGATCAACAGCTGGTGTGAGTTGTTGGTGTTATCTTGCTGCTACCGCGGCGTGAGCACTCCGGGGGAAGTGAGAGTGGGGGGCGGGAGGGGCATCACTCTTTCACAAAGTGCCAAGCTGGGATTGACGCCTTGTATAGAGAGAATGCTAAGCTTCACCGACCACTTGAGGCGACTACGAGTGGACCGATACGAGTACGTCGCCTTGAAAGTCATCGTACTGCTCACTTCAGATGCGCCAGAACTACGCGAAGCGGAGAAAGTGCGAGCGTCCCAAGAGAAAGCGCTGGCAGCGCTACAAGCGTACACCACCACGCACTCGCCCGAGACTCCCGCAAAGTTCGGCGAGTTGCTGCTACGTATCCCCGAGCTGCAGCGGACTTGCCAATTCTTCATGCAAGTCGGCAAAGAAATGCTCAACCCAGCAAACAAAGGCAAGGATGGCGACGCACCAAGCTTCAACCTCCTCATGGAACTACTGCGAGGCGACCACTGA
- Protein Sequence
- MSSEADAVKVEGVHVSVTTISMTGPETSNVQFSYSSSGVRISVSSDPHDEDSTDAEISKIDFNQHQYEVNMRNKKKRSSSGTQCDSQSNDRERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEPLKTEAFQCVDDQRVLDLKYSAPLQPHQRSHSMNRISVLTDNSPLSLARRPTSPTNSAKSLGLNDQNTVPMMPQTSLGEVQNLTIKKETQLSELKCEPSVGMDKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREAAAPMFPASPAHDEDADTTDERLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGASSTGSLLSAHVPTTLRHASSLTCVNGPGSYTNSRGESSNSRLTPDIPPLLQEIMEVEHLWQYNESELNRLGKSTGSPSANPLLAASGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLSQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTTTHSPETPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKGKDGDAPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00033911;
- 90% Identity
- iTF_00806824;
- 80% Identity
- iTF_00640514;