Esim006760.1
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947532085.1
- Location
- OX383932.1:27228721-27253367[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 1.7e-65 5.7e-61 207.3 14.3 1 222 132 339 132 344 0.94 2 23 0.025 8e+02 -0.1 0.0 200 222 362 384 352 389 0.87 3 23 0.025 8e+02 -0.1 0.0 200 222 407 429 397 434 0.87 4 23 0.025 8e+02 -0.1 0.0 200 222 452 474 442 479 0.87 5 23 0.025 8e+02 -0.1 0.0 200 222 497 519 487 524 0.87 6 23 0.025 8e+02 -0.1 0.0 200 222 542 564 532 569 0.87 7 23 0.025 8e+02 -0.1 0.0 200 222 587 609 577 614 0.87 8 23 0.025 8e+02 -0.1 0.0 200 222 632 654 622 659 0.87 9 23 0.025 8e+02 -0.1 0.0 200 222 677 699 667 704 0.87 10 23 0.025 8e+02 -0.1 0.0 200 222 722 744 712 749 0.87 11 23 0.025 8e+02 -0.1 0.0 200 222 767 789 757 794 0.87 12 23 0.025 8e+02 -0.1 0.0 200 222 812 834 802 839 0.87 13 23 0.025 8e+02 -0.1 0.0 200 222 857 879 847 884 0.87 14 23 0.025 8e+02 -0.1 0.0 200 222 902 924 892 929 0.87 15 23 0.025 8e+02 -0.1 0.0 200 222 947 969 937 974 0.87 16 23 0.025 8e+02 -0.1 0.0 200 222 992 1014 982 1019 0.87 17 23 0.027 8.8e+02 -0.2 0.0 200 222 1037 1059 1028 1063 0.88 18 23 0.025 8e+02 -0.1 0.0 200 222 1082 1104 1072 1109 0.87 19 23 0.025 8e+02 -0.1 0.0 200 222 1127 1149 1117 1154 0.87 20 23 0.025 8e+02 -0.1 0.0 200 222 1172 1194 1162 1199 0.87 21 23 0.024 7.9e+02 -0.1 0.0 200 222 1217 1239 1208 1246 0.88 22 23 1.1e-09 3.7e-05 24.0 3.8 214 297 1253 1327 1241 1329 0.76 23 23 1 3.2e+04 -6.4 14.7 1 48 1326 1372 1326 1400 0.69
Sequence Information
- Coding Sequence
- ATGGGTAGATCATCCAAATTGGCGACGCCTGGCAATAGTGACGACGAAAGCGGAGGAGACGCCTTCACCGATGGTGACTTTGACGACTCCGATGAAGACACGGTGGTAGAGAGAAACGGAGACGCCGAGCCAGCCCATATGCCCGTTAATGAAGCAGTAAACTGCGAAGCCAAAAAAATAAATGGCTGTGACTCAGCCGCTAATGACATTAAATTGCAAACTAATGTCCTCGAAAGTCAGCCTAAAATGAACGGATCCAAGAATTATGAGAATGGACATAGTAGTGAAGTGGATAGTGTTACATTTGAAAATGGACTATCAGATATGCGAAGGGATTCTCACGTGGAACAAAATCCTTCCATCGTGGGAATATTGGGCGACCAGCAGAACCATGCCGAGCAGCGGCTTGCGGCGCGTCGGGCGGCGCGGGCGGAGGCGCGCGAGATTCGCATGCGTGAGCTGGAGCGGCAGCAGCGCGAACAGGAGAACCATGCCGACAAGGCGTACGACATGTATTCAGAGACGGTGGGGCGGCGCGGAGGCTCGCGGCTGGCGGCGCTGTCTCCGGGCGTCCACTCGCCGCGCCGTAGCTCCGAAGACTCCGTCGACGACAGCTTCAGCCTCAAAGACCTCAGGCACGAGCTTAAAGAGGTGGAAGAGAAATTCCGTAAAGCGATGATCCTTAACGCACAGTTGGACAATGACAAGGCAGCGCTCGGGTACCAGCTCGAGCTGCTCAAAGACAGGATAGAGGAGCTGCACGAAGAATATGCGCAACTACAACGCGAGCACAAAGAAAAATGTTCAGCACACGAGCGTTTAAAGCGCGAGCACGCGTCGCTGGAGCGCGAGTTGAGCTCCGCGCGGGACGCCGTGCGGGCGCGGGACGCGGCCGCACAGCTCGCGGGCTTCGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTGGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCACACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCAGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTGGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGACGCAGTCGGCAGCGGCCACGACGGGCCCGCGCTGGCGCTGGTGTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACGCTCGGTGAGTTTGTGGCGCGGTCTACTGGCGGGCTTGCCTTCGTGGATGCAGTCGGCAGCGGCGACGACGTGCGGTTGCAGAAGTTGCTGAGCTCGAAGCAGGCGCTGGAGTCCGAAGTACGCAAGCTGAAGCTTCAGCTCAACGAGGAGCGCGCCGCCAGGCAGAACGGCGTGGCCAATCACCACGACGCCGAGTACGAGAACGAATTGGAAACCCTGCGCAAGTGCGTGTCGGAGGCGAAGGCGCGAGCGGCGCGCGCCGAGGCCGAGGCCGCGCTGCAGGCCGCCGGCGTGGCGCGCCTCGAGGCCCAGGTCGCCAGGCTGCGCGCCAGACAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCCGGCTGCAGCGAGAGGCTCGGGAGGCCCTGAATCGCGTGGAAGAGCTGGAGACGGAGAACAGCCATCTGACCAAGCGGCTAGACAAGCTCAAGAACGCCAAGTCGGCGCTCCTCAAGGACCTGTGA
- Protein Sequence
- MGRSSKLATPGNSDDESGGDAFTDGDFDDSDEDTVVERNGDAEPAHMPVNEAVNCEAKKINGCDSAANDIKLQTNVLESQPKMNGSKNYENGHSSEVDSVTFENGLSDMRRDSHVEQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQENHADKAYDMYSETVGRRGGSRLAALSPGVHSPRRSSEDSVDDSFSLKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHASLERELSSARDAVRARDAAAQLAGFAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGRLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGHDGPALALVSHQSEQLLNDAGEGTLGEFVARSTGGLAFVDAVGSGDDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDAEYENELETLRKCVSEAKARAARAEAEAALQAAGVARLEAQVARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -