Eagr005654.2
Basic Information
- Insect
- Eledona agricola
- Gene Symbol
- bab1
- Assembly
- GCA_964023215.1
- Location
- OZ026855.1:18221507-18236638[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.9e-12 1.3e-08 34.7 0.0 1 39 373 412 373 416 0.90 2 4 5.3e-13 1.2e-09 38.0 0.1 1 39 427 465 427 468 0.95 3 4 2.6e-19 5.9e-16 58.2 0.0 1 45 482 527 482 527 0.98 4 4 7.2e-17 1.6e-13 50.4 0.0 1 39 534 573 534 577 0.93
Sequence Information
- Coding Sequence
- ATGTCTGGCCAGCATTACTGCCTGCGATGGAACAATTATCAGAGTAACATGACTTCGGTTTTCCACCAGCTGCTTCAGAACGAAGCCTTTGTTGACGTCACGTTGGCCTGCAACGACCTATCGCTCAAGGCCCACAAGGTGGTGCTGTCGGCGTGCTCGTCGTACTTTCAGAAGCTCCTCCTCGAGAATCCCTGCAAGCACCCGACGATCATAATGCCCCAGGACGTTTGCTACGCCGATTTGAAATTCATCATCGAATTCGTCTACAAAGGAGAAATCGACGTTTCCCAGACTGAATTGCAGTCACTTCTTCGGACGGCCGACCAGCTGAAAATAAAGGGCTTGTGCGAACCTCCCGACGAAGCAGAAGACCCACCAAACGAGCCGCACTTTGCCAAAAGCTTCTCCAAAGTCCGGAAGACCGCGTCACCGAAACAGTTCAAATCTCAAGACAATAAGAAACACAAGCCGAAAAGACTGCATCGAGAAAATACGTCGGATAGGGAGGACGACTGCAGCATAGATGGGAATTCGTCGCAGGACGAACATGACACACCAGCGGCTTTAAATGAACACAAGAGAAAAAGAGGGGAGCCGGAACAAATAAAGCCTCTCAACATGAGCAGTCATGGAATTATGACCGGACAGCAAACGATCTTCTCCCAGTTTGGAGTCGACACAGATGACTTCCCTCCAGAGCCTCCGGCGCCTTCAGCAATCCCTGTTGGTCACGTGGACATGCAGGATCATTCCCCGACAAGAACCCTCCTCACCAACACCATTCACCGAACAGACCTTTCAGATTCCAACATCAAATACGTCGACATTAAGAAGGAAGTCATCGACGTCAAATTCGAGACTTTGCGATCGTACGACCAGGACTCCTTACTTGAGATGGACTCTCAAATGTCCGGACATTCGATGGACAGTCACGACGACGACAAAAGCATGCATCAGATGATGGTAACCCCAGAACTCATGGGCATGATGCCCGGCGTTTCGAACAGATTAGTTGTAGATTTAAGTAGCAACGAAGTACCTGCATTAAAAAACAATGGCCATACTGACGGCCTCTACCATACCCCAAGATCGCACGGTGGCGGTCCGAAAACGTGGACTCAGGAAGATATGGATATGGCCTTAGACGCTTTAAGAAATCATAACATGAGCCTCACAAAGGCATCCGCAACTTACGGTATTCCCTCCACTACGCTATGGCAAAGAGCGCATAGGTTAGGAATTGATACACCAAAGAAAGAAGGACCGACGAAGTCCTGGACCGAAGAAAATCTCAACAGCGCGTTAGATGCTCTAAGGACCGGAACGATTTCGGCGAACAAAGCCAGTAAAGCTTATGGTATTCCAAGTAGCACTTTGTACAAAATTGCGAGGCGAGAAGGTATAAGATTGGCTGCACCTTTCAACGCCGCCCCCACAACGTGGACCCCCGAAGACTTAGAAAAAGCGCTGGAATCAATCAGATCAGGTCAAACGTCCGTTCAGAAAGCGTCCACCGAGTTCGGGATTCCCACGGGAACGTTGTATGGCAGATGCAAGCGGGAGGGTATAGAACTGTCCAGGTCCAATCCCACGCCTTGGTCGGAAGACGCGATGGGCGAAGCACTAGAAGCTGTTAGATTAGGCCATATGTCCATCAACCAAGCTGCCATACACTACAATCTGCCTTATTCTTCTTTGTATGGCAGGTTCAAGCGAGGCATCAAATACGAATCCGACAATATCGAGCCCAAATCGGATAGTCAGTCTCAGCTCGACGGCTACTCATATGGTATGGAATACGCGAGTACTCCACAACAAATCCAGTACCAGAACCAGACGGACAGCTGA
- Protein Sequence
- MSGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYADLKFIIEFVYKGEIDVSQTELQSLLRTADQLKIKGLCEPPDEAEDPPNEPHFAKSFSKVRKTASPKQFKSQDNKKHKPKRLHRENTSDREDDCSIDGNSSQDEHDTPAALNEHKRKRGEPEQIKPLNMSSHGIMTGQQTIFSQFGVDTDDFPPEPPAPSAIPVGHVDMQDHSPTRTLLTNTIHRTDLSDSNIKYVDIKKEVIDVKFETLRSYDQDSLLEMDSQMSGHSMDSHDDDKSMHQMMVTPELMGMMPGVSNRLVVDLSSNEVPALKNNGHTDGLYHTPRSHGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALDALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYESDNIEPKSDSQSQLDGYSYGMEYASTPQQIQYQNQTDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00852594;
- 90% Identity
- iTF_00639668;
- 80% Identity
- iTF_00639668;