Basic Information

Insect: Electrophaes corylata
Gene Symbol: RREB1
Assembly: GCA_947095575.1
Location: OX352721.1:4183668-4196071[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.6 30 5.5 1.9 1 23 90 113 90 113 0.93

2 12 3.4 1.7e+02 3.1 0.2 1 22 142 163 142 163 0.93

3 12 0.024 1.2 9.9 0.1 1 23 290 312 290 312 0.97

4 12 0.0013 0.064 13.9 0.4 1 23 321 343 321 343 0.99

5 12 0.00079 0.04 14.5 2.0 1 23 349 372 349 372 0.97

6 12 0.0032 0.16 12.6 1.6 1 23 721 744 721 744 0.96

7 12 0.00027 0.013 16.0 1.3 2 23 935 956 934 956 0.97

8 12 0.027 1.4 9.7 5.3 1 23 962 985 962 985 0.97

9 12 0.16 8.2 7.2 1.0 1 23 1018 1042 1018 1042 0.92

10 12 1.5 73 4.3 1.2 1 23 1066 1089 1066 1089 0.90

11 12 0.002 0.098 13.3 0.2 2 23 1129 1150 1128 1150 0.96

12 12 0.03 1.5 9.5 5.3 1 23 1156 1178 1156 1178 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.6	30	5.5	1.9	1	23	90	113	90	113	0.93
2	12	3.4	1.7e+02	3.1	0.2	1	22	142	163	142	163	0.93
3	12	0.024	1.2	9.9	0.1	1	23	290	312	290	312	0.97
4	12	0.0013	0.064	13.9	0.4	1	23	321	343	321	343	0.99
5	12	0.00079	0.04	14.5	2.0	1	23	349	372	349	372	0.97
6	12	0.0032	0.16	12.6	1.6	1	23	721	744	721	744	0.96
7	12	0.00027	0.013	16.0	1.3	2	23	935	956	934	956	0.97
8	12	0.027	1.4	9.7	5.3	1	23	962	985	962	985	0.97
9	12	0.16	8.2	7.2	1.0	1	23	1018	1042	1018	1042	0.92
10	12	1.5	73	4.3	1.2	1	23	1066	1089	1066	1089	0.90
11	12	0.002	0.098	13.3	0.2	2	23	1129	1150	1128	1150	0.96
12	12	0.03	1.5	9.5	5.3	1	23	1156	1178	1156	1178	0.97

Sequence Information

Coding Sequence: ATGCAGGGCGCTGGTGTGTCCGCGGCCCCGGCGTCCGAGCCACCTTCTCAGCAAATCAAAACAGAGGAGGTCTGCAAGGCTAAAATCGAGGCCGAGGAAATGGAAAGGATGATTATCGAGCGCCAGGAGTTGAGGGGCACTCGGACGACGAGCATCGACAGTGACAACCGCTCCGATAGAAGCGAAGAGGATGACTGTCGGAGAGCCAGAAAACGGGCAGCATCGACCTCCCCTACTCCCATTTCTATGGATAAGAGAATAGCGCGGTTCGAATGCCCAAAATGTCGCCACAGATTCGATTCGGTTAACGCGTACGACATGCATCGCTTCACCGTCCACGGAGACGACTCTCGCTCTGGCTACGACGATCTCCTCGACTTCTCCACCAAAAAGTTCCCTGAAATCACCCGCGGACTCCACAATTTCAGATGCGATCTCTGCATGAGGGACTTCAACAACGCACAAGTCCTAGACATCCACAGAAAAACATGCTCCCCTTTGCACAGAATACCAACTCCCGACCGCGATCGCAGAGAAGAGTTTTTCGCGAAACTGGACCTTAGGAACAGGTCGTTCGGTATTCCAGGCACGTTGACTCCCCCTATGGAGAGGTTCACGCCAAAGTTCGACGATGGACATATCGGTAATGGTATACGGCATATCGACGCCGCTCGAGACTTGGCAGATATTCAATCGATACTCACCGTCACGTCAACGGGAAGCCTTTTAGAGAGACTCACTGGCACCAGAGTCAATTTAGAAAGTTCCGTGCTGACGCCACCGGACACTATTGCAAAAGATCGTGACCAGGAAGAGACGCAAGACAATTTTGCGGCTGAATTTAGGCGTATGAAACTTCGCGGTGAATTCCCTTGCAGATTATGCCCTGCTAAATTTCCAAACCTACGAGCCTTGAAGGGACACAACAGAGTGCACCTTAGCGGAACAGGACCCGGCCCTTATCAATGCAACATGTGCCCTCATGCTTCCTTGGACAAAGCAGCTTTGGTCAGGCATATGAGAACTCATAACGGTGACCGTCCTTACGAATGTGCTGTTTGCAACTACGCGTTTACAACCAAAGCAAACTGCGAGCGACATTTGAGGAACAGACACGCCAAAGTCACCCGTGAGGATGTAAAGCGTTCAATCATATACCATCCTTCAGAAGATCCTAACAACGACGAAGTTAACTCCAAACTCACTCGAGACGAAGTCAAGAGATCACTTGCTTTCCACTCTCCCCCTGAAATCGATAGACGTAATGACAGTACCGGTCGCGATACTCCTGTGACGCATCATTTCTCGCCTGGCTTCATAACTGAAAGACACCCTGTGGTTTCACTAACTTCAAAGCCGATTCCTGACTTAGCACCACTGCCCCCAAGAGAACCAGAACAACCCGGGCCTAGGATCAATGTCATAAGCATTGGACAACTGACGCAAATTCCAGAATTCAGAGTGCCGGATCATTCATTTAAGCCCAACGATATCAAGCCTGAAATCTACGAAGAAGAGACTCCAGTAGATCTTAGCACAAACGATAACAACAACTGTGATGTACTCGATCTTAGCAAGAAGAAGCGTGATACTGACAACGATGAACCTAAAGACCTTACACCTCCTCGAACAACCTTCGAGCCTGATGCAGCAGCAGTTGCAGCTACAGCTTTTGAAAAGACGAGGTTATTGCTCGCCCAGCAAAGACTCTTTGAAAACTCACTCCCAAAAATAGACCCTGCTTACTATGCCACTCAACTTTCCCAACTCTACGCCGGTGCAGTTCCTGGGCTGCACGGTCTTCCTCTTCCACCTTCTTTCCCTTACTTTCTTCAACCTCCTTTTTTTCCTGACACCCCCGAAATGACAGAAATGAAGCAACGTATTCAGACGGAAATTATTCGAGGTCTCAGCATGTCAGGTGGAAGGCTCGTCCCAAGCGAGCAGGAGATTCAGCCTAAGCAAGAACCTGAACCAGAGATCGAAGAAAAGCCGGCGCCGCTCATAATATCCCCTGTACTATCGCCCCGCTCAGAATCTCCCAGACCAATGTCCAACAACAACAACATGGTATCACAGACGGATTCCGTCAAAATGGTGATCAAGAACGGCGTTCTCATGCCGAAGCAGAAACAGAGGCGCTACCGTACAGAGCGACCTTTCTCCTGTTCGCAATGCTCGGCTAGATTCACTCTTCGGTCCAACATGGAACGTCATGTGAAGCAGCAGCATCCTCAGCACTGGAGTGTTAGACGTCCGGCTTCGAGGGCACCACCGCCATATCCATCTTCAGATGCTCTAGCTGACCGCGTCAAGTTTGCGTTACTAGCGCGTCACCTTGAAAGACCTCTTCAGCAATCTGATCACTCACCAATCCGTCGCGATTCGGATGAGGTTGCTGACAACGAGGAAGACGAAGACGATGCTTTGATCATTGATGAAGAACCAGAGCTGGATCCCGAAGAGCACTCAGCTGCCAAGCGTGCCGCAGCAGAAATCCTTATGGCAACCTGTCAACAGGAGTTAAACAAGGACTTTGATCTCAAAATCGCTGGCAATTTAATCAACAAACCAATTGCCGATAAAATTGAAACAGACTCGGAACCTATTCCTTTAATGCAAGAGCCCTTGCCACTACCGGTTGTTCCGACGCGAAGTGATGAGGAAGAAGATGAAGAAGGATTGGTCGCCTCTACTAGTGAAGGCAATAATTCTGGAAGTGATGAAAACAAATCGGAATCCGACACTGGAACCCAGCCACCAAAAAAACGCTCAGCTTACAGCCTGGCACCAAACCGTGTCTCGTGCCCTTACTGCCACCGGAAGTTCCCCTGGTCTTCGTCATTACGCCGCCATGTGCTCACCCACACTGGACAGAAGCCCTTCAAATGCCCACACTGCCCACTGTTGTTCACCACCAAATCCAATTGCGATAGGCATTTGCTGAGGAAGCATGGTGGCTCCGCAAGGGCTGTACTAGCAGATCCTGTTTCTGATGCCATATCCCCTCCTCAACCTGTCAACGACATTCGAACTGTGCCAGAAAGGCCTTTCAAATGCGGCAAGTGCCCTACCAGCACATTTTCATCTGTGGAAACTTTGAAGAGACACGTCTCTTCTCGCCACTGTTCAGTCGAATCCCAACCTAGCTCACCAAACCCAGACAATCACGAAGAAACTGTAGACGGCATGGTCTTCAAGTGCCATCTCTGTGAAGCGTCATACCATGACCGAACTGGAGCCTTGAGCCATTTGGCTAATGTACACACTACGGAGTACGAACAGCTGGTTACTAAGGGAGCCTTGGATGGAACGAGCGACAAGAGCGAGAACACTGATGATGACGATAGGGGGAAGTTTCCAGATCATGCTAATAGAAAGGTAGTCTGCGCGTTTTGTGTGCGTCGCTTCTGGTCTGCAGAGGATCTCCGTCGCCATATGCGCACTCACTCAGGCGAGCGTCCCTTCGCATGTGACCTGTGCCGTCGTCGCTTCACGTTGAAGCACAGCATGCTTCGCCACCGCAAGAAGCACAGGGAGGAGGCCACTGATGATGAGGAAGCTTCACCGCCGAACACACCTGAGGAGAAAATCAATGGCTACCGCTTCCAAGATGACGATTCCGGTAACGAGATCCCCAACAACGTGAATAACAACAACTCTCCCCCCGCGGTGCCCTACGAGAAGAAACTCCGTCTGGATATGACTTCTCGCAAGTATTCTTCAGAAGAAAACGATGGTGAAAATGGCAGCGATCTCATCGGGAAACTCCTAGGAATCCCTGACAAGACTATAAATAAACTCCTGTCTTCGGCAGACGAGGCCGCAAAAATACTGGGAGTGAATAAATGA
Protein Sequence: MQGAGVSAAPASEPPSQQIKTEEVCKAKIEAEEMERMIIERQELRGTRTTSIDSDNRSDRSEEDDCRRARKRAASTSPTPISMDKRIARFECPKCRHRFDSVNAYDMHRFTVHGDDSRSGYDDLLDFSTKKFPEITRGLHNFRCDLCMRDFNNAQVLDIHRKTCSPLHRIPTPDRDRREEFFAKLDLRNRSFGIPGTLTPPMERFTPKFDDGHIGNGIRHIDAARDLADIQSILTVTSTGSLLERLTGTRVNLESSVLTPPDTIAKDRDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLTRDEVKRSLAFHSPPEIDRRNDSTGRDTPVTHHFSPGFITERHPVVSLTSKPIPDLAPLPPREPEQPGPRINVISIGQLTQIPEFRVPDHSFKPNDIKPEIYEEETPVDLSTNDNNNCDVLDLSKKKRDTDNDEPKDLTPPRTTFEPDAAAVAATAFEKTRLLLAQQRLFENSLPKIDPAYYATQLSQLYAGAVPGLHGLPLPPSFPYFLQPPFFPDTPEMTEMKQRIQTEIIRGLSMSGGRLVPSEQEIQPKQEPEPEIEEKPAPLIISPVLSPRSESPRPMSNNNNMVSQTDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPASRAPPPYPSSDALADRVKFALLARHLERPLQQSDHSPIRRDSDEVADNEEDEDDALIIDEEPELDPEEHSAAKRAAAEILMATCQQELNKDFDLKIAGNLINKPIADKIETDSEPIPLMQEPLPLPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGTQPPKKRSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAVLADPVSDAISPPQPVNDIRTVPERPFKCGKCPTSTFSSVETLKRHVSSRHCSVESQPSSPNPDNHEETVDGMVFKCHLCEASYHDRTGALSHLANVHTTEYEQLVTKGALDGTSDKSENTDDDDRGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEATDDEEASPPNTPEEKINGYRFQDDDSGNEIPNNVNNNNSPPAVPYEKKLRLDMTSRKYSSEENDGENGSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00661758;
90% Identity: iTF_01220151;
80% Identity: -