Basic Information

Insect: Electrophaes corylata
Gene Symbol: salm
Assembly: GCA_947095575.1
Location: OX352700.1:8418449-8434875[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.6 30 5.5 0.7 3 21 2 20 1 21 0.94

2 11 6.3e-06 0.00032 21.1 0.9 1 23 323 345 323 345 0.98

3 11 1.3e-05 0.00063 20.2 2.1 1 23 351 373 351 373 0.98

4 11 1.7 83 4.1 3.0 5 23 672 690 669 690 0.92

5 11 1.4e-07 6.8e-06 26.4 1.2 1 23 696 718 696 718 0.97

6 11 0.0045 0.23 12.1 7.0 1 23 728 750 728 750 0.97

7 11 0.0026 0.13 12.9 1.9 2 23 927 948 926 948 0.97

8 11 0.038 1.9 9.2 1.6 1 14 954 967 954 968 0.94

9 11 0.99 50 4.8 0.0 10 23 995 1008 993 1008 0.93

10 11 5.7e-06 0.00028 21.3 1.7 3 23 1090 1110 1088 1110 0.96

11 11 6.7e-07 3.4e-05 24.2 0.5 1 23 1116 1138 1116 1138 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.6	30	5.5	0.7	3	21	2	20	1	21	0.94
2	11	6.3e-06	0.00032	21.1	0.9	1	23	323	345	323	345	0.98
3	11	1.3e-05	0.00063	20.2	2.1	1	23	351	373	351	373	0.98
4	11	1.7	83	4.1	3.0	5	23	672	690	669	690	0.92
5	11	1.4e-07	6.8e-06	26.4	1.2	1	23	696	718	696	718	0.97
6	11	0.0045	0.23	12.1	7.0	1	23	728	750	728	750	0.97
7	11	0.0026	0.13	12.9	1.9	2	23	927	948	926	948	0.97
8	11	0.038	1.9	9.2	1.6	1	14	954	967	954	968	0.94
9	11	0.99	50	4.8	0.0	10	23	995	1008	993	1008	0.93
10	11	5.7e-06	0.00028	21.3	1.7	3	23	1090	1110	1088	1110	0.96
11	11	6.7e-07	3.4e-05	24.2	0.5	1	23	1116	1138	1116	1138	0.98

Sequence Information

Coding Sequence: ATGTGCCCGCGATGCCAGGAACAGTTCGAAAACCTTCACGAATTTCTCTATCACAAGCGACTTTGTGACGAGAAAGCGATGCAAATGGGCGAGGAACGAATGCACTCCGACCCCGAGGAGATGGTCGTTTCCGGAGATGAGGAAATGGACGGTCCGAACAAACGGTTAGAGCAAGTACGACGGCACCGGCAAGACGCTGAAAATAACAATAGCCTCGAAGATGGTGAGGGCGAGGTGCCCGAAGCCGACGTGCCACCCGCAGTTGGCCTACCTTTTTCTGTCGCAGGCCACGTGACGCTTGAAGCGCTACAAAACACAAAAGTCGCTGTAGCACAATTTGCCGCAACCGCAATGGCCAATAACGCGGATAATGAAGCCGCCTTGCACGAACTTGCCGTGTTGCAGAGCACGCTATTTACGTTGCAACATCAACAAGTATTCCAACTGCAATTAATACGTCAGCTCCAAAGCCAACTTTCGTTAACGAGGCCAAAAGATGATACGGCACCAAGTCCACCGCCAAGCGAGCCAGACCCCATCGTCCCGGTGCTGCCTCCAGCGCGGTCACCGTCACCGCCACGTCCGCCACGGAAGCCTACTCCTGTCATATCCAAACCTCCCACTAGCCAAAGCTTGCCGTCGACTCATTCGCATCTCATTCCCAAAACGGAACCAATATCTGTTCCTAAACTTCCGATCTCATCACCGCCGTCGATGTCCCACCCGCCCTACAGCTCCATTTCGTCGTCATTAGCATCCACAATTATAACGAACAATGATCCACCACCGTCCCTCAACGAGCCAAACACACTAGAGATGCTGCAAAAGAGGGCACAAGAAGTACTTGATAACGCTTCTCAAGGTCTGTTGGCGAACAATCTCGCCGATGAACTAGCATTCCGAAAATCAGGAAAAATGTCGCCTTATGACGGGAAGTCCGGTGGACGCAATGAACCATTCTTCAAGCACCGCTGCAGATATTGCGGCAAAGTGTTTGGAAGTGACTCTGCGCTCCAAATCCACATTCGGTCGCACACAGGAGAGCGGCCGTTCAAATGCAACGTTTGTGGATCTCGATTTACAACCAAAGGGAACTTAAAAGTACATTTCCAAAGACACACATCAAAGTTCCCCCATGTGCAGATGAACCCTAACCCGATTCCAGAACATTTAGACAAATATCATCCTCCACTATTAGCGCAACTGTCTCCGGGACCGATTCCCGGAATGCCTCCACATCCCTTGCAGTTTAACCCCGGTGGAGGAAACCCTTTCCCACCGAGCTTACCATTATACAGACCGCCGCATCATGATTTGCTACCGCCTCGTCCCATGAGCGATAAACCATTACCACCGCACCCACTATTCGCAATGCGCGAAGAACAAGACGCTCCGGCAGATCTCAGTAAGCCATCCGCGCCGAGCCCTTTACGATCTGCACCTGATGCATTTAAATCTGAACCTCAAGACGAAGAAAGCCAACGAGATTCCAGTTTTGAAGAGACAGACCGCGTCACACCCAAGCGAGAACCGGAGGACATTGACGCACAACAAGACGCAGAACCAGATCGATATCATTCCACCTCACCGTACGACGACTGCAGCATGGACTCAAAGTACAGCAACGAAGAGCATATCGGGAGAGAAAGCCCACATGTCAAGCCCGATCCAGACCAACCGGAAAATCTCTCAAGTAAGAATTCATCGATATCTGGACCAATTTCAATAGCGACGGGACTTCGAACCTTTCCTGCGTTTCCGTTGTTTCCCCAATCACCACCTAGTAGTATTTCCTCGGGTAGTTTAACTCCTTTCCGCAGAACTCCACAAAATGTCGTTGACGTAGACTTGACTCGTGACCCTCTTTTCTTCAATGCTCTCTTACCGCGGCCGGGTAGCAATGATAATTCTTGGGAAAGTTTAATAGAAGTTACGAAAACATCAGATACAGCGAAATTGCAACAATTAGTAGATAACATAGATAGTAAACTCTCCGATCCAAACGAGTGCATAGTATGCCATCGGGTACTGTCTTGCAAAAGCGCTTTACAAATGCATTATCGAACACACACTGGTGAGAGGCCTTTCCGATGTAAATTATGTGGCCGGTCGTTTACGACTAAAGGCAATTTGAAGACTCACATGGGCGTGCATCGAATTAAACCTCCCGTTCAAATGTTGCATCAATGTCCAGTATGTCACAAGAAATTTTTTGACCCTTTTACATTACATCAGCATGTCCGTTTTCATACCAGCGAACGAAACAGTGCCCCTTACGAGCAGTTCGGGAATATAGACTGCGACAGTTTTCCATCATTGAGTAACGAGTCCGACGTCAATGACTTTTTTCCTTACCGACCCGTCCCAGCTCCCATGTTTCCAACTCCGAATACTCCCGGCGACCGACGGGCGGACTCCCGCGGGACCGACGATGAGAGCGGCCGGGACGAGCCCGCTATTCGGGAGTTCGACGACGACTCATATATGAAGGATCGTCGAACTTCGCCGCTCTCCGTCTGCGCCTCGGCGTCCGAATGCGAAATAAAAACCATCACCACAACGGCTTCCCTCCCATCGGCGACAGGTTCGGAGAGCGGGCGTTCGGCGCGGGCCTCGCCACCATCGCCGACGATGTCGACGCTGTCGACGCCGCCGCGGCTGCCGATGCACTCACCGCAGCCGTCACCGCCCACGCCGCTGGCCGCACTCGGCGCGCTCGGAGGATCGCCTTTCAGCCCACTCGGACTCGCGTTTCCTCCCGCAGTGCGCGGAAACACAACATGTAACATCTGCTACAAGACGTTCGCCTGCAACTCGGCTCTAGAGATCCACTATCGCAGCCACACCAAGGAGCGCCCCTTCAAATGCACTGTCTGCGATCGCGGTTTCTCCACAAAGAGCAGTGGCGGCGGTTGCCGGTGCGGTAGGCGCGCGCGCGTCACCCGCCCCCCGCACGCCACTGCTTTGGACCTCTGGAACGCCTTCGTATACCCGGGCAACATGAAGCAACACATGCTAACACACAAGATCCGCGATATGCCGCCGGGCTTCGACAAAAACACGCCGGGAATGTCTGACGATGGGCGGGAGAGTCCCGACAGACGCTCGTCCCCCGACAAAATGGATCTGAAGAGGTCACCGCCCGCCCTACCCCAGCCGCCGATGACGCATGCACCGCCCATGGATATGCCGCCGATGCCGAAACGACCTAGCTTGCCGACAGGACCGAGTCACCCGCCGCCGCCGCCGATGTCATCCAAGCATCTCTGCGGAGTCTGTCGCAAGAATTTCTCATCATCATCAGCACTGCAAATCCACATGCGCACGCATACGGGTGACAAGCCCTTCCGCTGTGCTGTATGCCAGAAGGCGTTTACAACCAAAGGAAATCTTAAAGTTCACATGGGTACGCACATGTGGAGCGGCGGCGCGTCTCGCCGCGGTCGGCGCATGTCGCTAGAGCTGCCTCCGAGGCCTCTGCATGAACCGCACGAGTTGCTGCGACGCCCTGACCTCTTCTACCCGTACCTGCCCGCGCCCTTCCTCAACGGCATGCAGCAAAAGCTGAATGAAATATCAGTGATCCAGCAAAGCGCGGGTCAGAACGGCGTAGGAAAATTTCCGGGACTGCTTGGCTTCGGTGCATTCACCGGCGGTAGACCCGGCGCCGCCTCGCCGCTTGAGAGGCCTCCGTCGCTCGACGGCGGAGACGAGAGGCAGGCCGCCATGCGAGAGCTCGCGGAGCGCGGGAGAGAGCTCGCTGAACGCAGCCGGCAGATGCGCGAGGAAGCAGAATACCGCTCGCCCCCCACGCACCCCCCGCACCAGCCATCATCAGCTCAACCCTCACCCCCCGCCCCGCACCATCAGCTACCCCATCCCCTGTCCTCGCTCCCACCGCCCGCGCGCACTGAGGGCCTCACCGTCTGA
Protein Sequence: MCPRCQEQFENLHEFLYHKRLCDEKAMQMGEERMHSDPEEMVVSGDEEMDGPNKRLEQVRRHRQDAENNNSLEDGEGEVPEADVPPAVGLPFSVAGHVTLEALQNTKVAVAQFAATAMANNADNEAALHELAVLQSTLFTLQHQQVFQLQLIRQLQSQLSLTRPKDDTAPSPPPSEPDPIVPVLPPARSPSPPRPPRKPTPVISKPPTSQSLPSTHSHLIPKTEPISVPKLPISSPPSMSHPPYSSISSSLASTIITNNDPPPSLNEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRKSGKMSPYDGKSGGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTSKFPHVQMNPNPIPEHLDKYHPPLLAQLSPGPIPGMPPHPLQFNPGGGNPFPPSLPLYRPPHHDLLPPRPMSDKPLPPHPLFAMREEQDAPADLSKPSAPSPLRSAPDAFKSEPQDEESQRDSSFEETDRVTPKREPEDIDAQQDAEPDRYHSTSPYDDCSMDSKYSNEEHIGRESPHVKPDPDQPENLSSKNSSISGPISIATGLRTFPAFPLFPQSPPSSISSGSLTPFRRTPQNVVDVDLTRDPLFFNALLPRPGSNDNSWESLIEVTKTSDTAKLQQLVDNIDSKLSDPNECIVCHRVLSCKSALQMHYRTHTGERPFRCKLCGRSFTTKGNLKTHMGVHRIKPPVQMLHQCPVCHKKFFDPFTLHQHVRFHTSERNSAPYEQFGNIDCDSFPSLSNESDVNDFFPYRPVPAPMFPTPNTPGDRRADSRGTDDESGRDEPAIREFDDDSYMKDRRTSPLSVCASASECEIKTITTTASLPSATGSESGRSARASPPSPTMSTLSTPPRLPMHSPQPSPPTPLAALGALGGSPFSPLGLAFPPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKSSGGGCRCGRRARVTRPPHATALDLWNAFVYPGNMKQHMLTHKIRDMPPGFDKNTPGMSDDGRESPDRRSSPDKMDLKRSPPALPQPPMTHAPPMDMPPMPKRPSLPTGPSHPPPPPMSSKHLCGVCRKNFSSSSALQIHMRTHTGDKPFRCAVCQKAFTTKGNLKVHMGTHMWSGGASRRGRRMSLELPPRPLHEPHELLRRPDLFYPYLPAPFLNGMQQKLNEISVIQQSAGQNGVGKFPGLLGFGAFTGGRPGAASPLERPPSLDGGDERQAAMRELAERGRELAERSRQMREEAEYRSPPTHPPHQPSSAQPSPPAPHHQLPHPLSSLPPPARTEGLTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00383064;
90% Identity: iTF_00034062;
80% Identity: -