Basic Information

Insect: Agriopis marginaria
Gene Symbol: salm
Assembly: GCA_932301435.1
Location: CAKOAR010000174.1:677921-693232[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 9.6 5.7e+02 1.7 0.5 3 17 2 16 1 21 0.83

2 11 6.2e-06 0.00037 21.1 0.9 1 23 321 343 321 343 0.98

3 11 1.2e-05 0.00073 20.2 2.1 1 23 349 371 349 371 0.98

4 11 2.6 1.6e+02 3.4 2.3 5 23 670 688 667 688 0.91

5 11 1.3e-07 8e-06 26.4 1.2 1 23 694 716 694 716 0.97

6 11 0.00071 0.042 14.7 4.3 1 23 726 748 726 748 0.98

7 11 0.0026 0.15 12.9 1.9 2 23 925 946 924 946 0.97

8 11 0.037 2.2 9.3 1.6 1 14 952 965 952 966 0.94

9 11 0.98 58 4.8 0.0 10 23 992 1005 990 1005 0.93

10 11 5.6e-06 0.00033 21.3 1.7 3 23 1088 1108 1086 1108 0.96

11 11 6.6e-07 3.9e-05 24.2 0.5 1 23 1114 1136 1114 1136 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	9.6	5.7e+02	1.7	0.5	3	17	2	16	1	21	0.83
2	11	6.2e-06	0.00037	21.1	0.9	1	23	321	343	321	343	0.98
3	11	1.2e-05	0.00073	20.2	2.1	1	23	349	371	349	371	0.98
4	11	2.6	1.6e+02	3.4	2.3	5	23	670	688	667	688	0.91
5	11	1.3e-07	8e-06	26.4	1.2	1	23	694	716	694	716	0.97
6	11	0.00071	0.042	14.7	4.3	1	23	726	748	726	748	0.98
7	11	0.0026	0.15	12.9	1.9	2	23	925	946	924	946	0.97
8	11	0.037	2.2	9.3	1.6	1	14	952	965	952	966	0.94
9	11	0.98	58	4.8	0.0	10	23	992	1005	990	1005	0.93
10	11	5.6e-06	0.00033	21.3	1.7	3	23	1088	1108	1086	1108	0.96
11	11	6.6e-07	3.9e-05	24.2	0.5	1	23	1114	1136	1114	1136	0.98

Sequence Information

Coding Sequence: ATGTGCCCTCGATGCCAAGAACAATTCGAGAATCTCCACGAATTTCTGTTCCACAAGCGACTGTGCGACGAGAAAGCAATGCAGATGGGCGAAGAACGAATGCATTCCGACCCAGAGGAGATGGTCGTCTCGGGAGACGAAGAAATGGATGGACCCAACAAACGACTAGAACAAGTCCGACGGCATCGACAAGACGCCGAGAACAACAACAGCCTCGAAGACGGCGAGGCAGAAGTGCCTGAGGCCGACGTGCCACCCGTCGGACTACCCTTCCCCGTCGCCGGCCACGTGACACTGGAAGCTCTACAGAACACTAAAGTTGCCGTAGCGCAATTCGCCGCAACCGCAATGGCCAATAACGCCGATAATGAAGCAGCCCTGCACGAACTTGCCGTGTTACAGAGCACGCTATTCACGTTACAACATCAACAAGTGTTTCAACTGCAATTAATACGTCAACTCCAGAACCAACTATCGTTAACTCGAAGAAAAGATGATCATCAGAGCCCGCCACCGAGTGAACCCGAAGCGAGCGTCCCGGCGCCTCAGACACGGTCGCCGTCACCGCCGCCTCGTCCGCCACGGGAGCCCACTCCTGTCGCACCCATTCCTCCCACTAGCCAAAGCTTGCCGTCAACTCATTCGCATTTCATTCCCAAAGTGGAACCGATATCCGTTCCTAAGCTTCCGACTACATCTCCACCCATAATGTCCCACCCGCCCTACAGCTCCATTTCGTCATCACTAGCGTCCACGATCATCACGAATAATGATCCCCCACCGTCCCTCAACGAACCCAACACTTTGGAAATGCTCCAGAAGAGAGCGCAAGAAGTGTTAGACAACGCTTCTCAGGGCCTGTTAGCGAACAATCTTGCCGATGAACTAGCATTCAGAAAGTCAGGAAAAATGTCACCGTACGACGGAAAATCCGGAGGACGAAACGAGCCCTTCTTCAAGCACCGATGCCGATATTGCGGTAAAGTTTTTGGAAGCGATTCCGCGCTCCAAATTCACATTCGTTCGCACACGGGAGAACGACCATTTAAGTGTAACGTTTGTGGATCCCGATTTACAACCAAAGGAAATTTAAAAGTTCACTTCCAAAGACATACGTCCAAGTTCCCGCACGTGAAAATGAATCCGAACCCCATTCCGGAGCATTTGGACAAATATCATCCTCCTCTATTGGCTCAACTGTCGCCAGGGCCGATTCCTGGTATGCCACCTCACCCGCTGCAATTCAACCCGGGTGGGCCATCACCTTTCCCGCCGACCTTGCCACTATATAGGCCACCACACCACGACCTGCTACCGCCAAGGCCACTCAGCGACAAACCACTGCCTCCACACCCATTATTTGCGATGCGAACGGAAGAACAAGACGCTCCGGCTGATCTCAGTAAACCCTCTGCGCCGAGCCCGACCCGAACTGCACCTGACTTATTCAAATCTGAGCCTCAGGATGAAGAGAGCCAACGGGATTCCAGTTTCGAAGACACAGACCGTGTCACACCTAAGAGAGAGCCGGAAGAACACGAACAACCCCAAGACGCTGAACCCGACCGATATCCTTCGACGTCACCTTACGACGACTGCAGCATGGACTCTAAATACAGCAACGAGGAACAAATCGGCAGAGAAAGTCCACATGTGAAGCACGATCCAGATCAACCGGAAAATCTCTCAAGTAAGAATTCATCGATATCTGGACCAATTTCAATAGCAACGGGACTACGTACTTTTCCCACATTTCCTCTGTTCCCTCACTCACCTAGTAGTATTTCCTCTGGTAGTATAACTCCATTCCGTAACACTCCTCAAACCATCGTTGACGTGGACCTCGCGCGTGATCCTGTCTTTTTCAATTCTCTTTTACCCCGACCGGGGAGTAATGACAATTCTTGGGAAAGTTTAATAGAAATCACAAAAACATCTGAAACAGCCAAATTACAACAGTTGGTCGATAATATCGATAATAAATTATCCGATCCTAACGAATGCATCGTATGTCATCGGGTTTTATCTTGTAAAAGCGCATTGCAAATGCATTATCGAATTCACACTGGTGAGAGGCCTTTCCGATGCAAATTATGTGGTCGCTCTTTTACGACCAAAGGCAATTTGAAAACGCATATGGGCGTCCATCGAATTAGGCCTCCCGTTCAAATGTTACACCAATGTCCAGTCTGTCATAAGAGATTCTCCGATCCGACTATATTGCATCAGCATATACGTCTTCACACCAACGAACGCAACAACATCCCTTACGATCAGTTCGGGGCTATAGAATTCGACAGTTTCCCATCATTGAGCAACGGGTCCGAAGTCAACGATTACTCTCCTCGCCGTTCCATTCCGCCTCCGTCGTTTCCCACTCCCAGCACTCCCGGTGACCGACGGGCGGACTCCCGCGGGACCGACGATGAGAGCGGCCGGGACGAGCCCGCCATTCGGGAGTTCGACGACGACTCTGATATGAAAGATCGTCGAACTTCGCCGCTCTCCGTCTGCGCCTCGGCGTCCGAATGCGAAATGAAAACTATGACAACAACGGCTTCCCTCCCATCGGCGACAGGTTCGGAGAGCGGGCGAAGTGCGCGGGCCTCGCCGCCGTCACCGTCGCTGTCGGCGCTGTCGACGCCGCCGCGGCTGCACCACCACTCGCCGCAGCCATCACCGCCCACGCCGCTGGCCGCGCTCGGCGCGCTCGGAGGATCGCCCTTCAGCCCTCTCGGACTCGCGTTCCCTCCCGCAGTGCGCGGAAACACGACATGCAACATATGCTACAAGACGTTTGCTTGCAACTCAGCCCTCGAGATCCACTACCGCAGTCATACTAAGGAGCGCCCTTTCAAGTGCACCGTCTGCGATCGCGGCTTCTCAACAAAGAGCAGTGGCGGCGGTTGCCGCTGCAGGCGCGCGCGCGCCCCCCGGCCGCCGCACGCCACTGCTTTGGACCTGTGGAACGCCTTCGTCTACCCGGGCAACATGAAGCAGCACATGCTGACGCACAAGATCCGTGACATGCCCCCTGGATTCGACAAGAGCTCGGGCTCGGTGCAGTCTGAAGACAGCCACGGGAGAGACAGCCCCGACAGGAGGTCATCGCCTGATAAGATGGAACTGAAGCGGTCGCCGCCCGCACACCCACCACCTATGACGCACGCCCCGTCAATGGACATGCCGCCACTGCCGAAACGGCCAAGTGTGCCGTCCGGGCCGACCCACCCGCCACCGCCATTGTCGTCCAAACACCTCTGCGGGGTGTGCCGAAAGAATTTCTCCTCATCATCAGCGCTGCAGATACACATGCGTACTCACACCGGGGACAAGCCTTTCCGCTGCGCCGTCTGCCAGAAGGCGTTCACCACCAAAGGAAACCTCAAGGTGCATATGGGAACTCATATGTGGAGTGGAGGGGCTTCGAGGCGCGGGCGGCGCATGTCGCTCGAGCTGCCTCCGCGGCCGCTGCACGAACCGCACGACATATTGAGGCGCCCCGATCTCTTCTACCCGTATCTACCCGCGCCTTTCTTGAACGGCATGCAGCAAAAGCTGAATGAAATATCGGTGATCCAGCAAAGCGCGGGTCAGAACGGAGTCGCCAAGTTCCCGGGCCTGCTTGGATTCGGAGCGTTCGCGGGCGGGCGGCCTGGCGCTGCTTCACCACTCGAGCGGCCGCCCTCGCTGGAGGGCGGCGACGAGCGGCAAGCCGCCATGAGAGAGCTGGCTGAACGAGGCCGGGAGCTCGCTGAACGGAACAGGCAGATGCGCGAGGAAGGAGACTACCGCTCCCCTCCCGCGCACGCCCCGCACCCACAACCGCCCGCGCAGCCCTCGCCCCCCACGCCGCACCACCAACTCCCCCACCCCCTCGCCTCTCTCCCGCCCCCGGCGCGTACAGAAGGCCTCACCGTCTAA
Protein Sequence: MCPRCQEQFENLHEFLFHKRLCDEKAMQMGEERMHSDPEEMVVSGDEEMDGPNKRLEQVRRHRQDAENNNSLEDGEAEVPEADVPPVGLPFPVAGHVTLEALQNTKVAVAQFAATAMANNADNEAALHELAVLQSTLFTLQHQQVFQLQLIRQLQNQLSLTRRKDDHQSPPPSEPEASVPAPQTRSPSPPPRPPREPTPVAPIPPTSQSLPSTHSHFIPKVEPISVPKLPTTSPPIMSHPPYSSISSSLASTIITNNDPPPSLNEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRKSGKMSPYDGKSGGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTSKFPHVKMNPNPIPEHLDKYHPPLLAQLSPGPIPGMPPHPLQFNPGGPSPFPPTLPLYRPPHHDLLPPRPLSDKPLPPHPLFAMRTEEQDAPADLSKPSAPSPTRTAPDLFKSEPQDEESQRDSSFEDTDRVTPKREPEEHEQPQDAEPDRYPSTSPYDDCSMDSKYSNEEQIGRESPHVKHDPDQPENLSSKNSSISGPISIATGLRTFPTFPLFPHSPSSISSGSITPFRNTPQTIVDVDLARDPVFFNSLLPRPGSNDNSWESLIEITKTSETAKLQQLVDNIDNKLSDPNECIVCHRVLSCKSALQMHYRIHTGERPFRCKLCGRSFTTKGNLKTHMGVHRIRPPVQMLHQCPVCHKRFSDPTILHQHIRLHTNERNNIPYDQFGAIEFDSFPSLSNGSEVNDYSPRRSIPPPSFPTPSTPGDRRADSRGTDDESGRDEPAIREFDDDSDMKDRRTSPLSVCASASECEMKTMTTTASLPSATGSESGRSARASPPSPSLSALSTPPRLHHHSPQPSPPTPLAALGALGGSPFSPLGLAFPPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKSSGGGCRCRRARAPRPPHATALDLWNAFVYPGNMKQHMLTHKIRDMPPGFDKSSGSVQSEDSHGRDSPDRRSSPDKMELKRSPPAHPPPMTHAPSMDMPPLPKRPSVPSGPTHPPPPLSSKHLCGVCRKNFSSSSALQIHMRTHTGDKPFRCAVCQKAFTTKGNLKVHMGTHMWSGGASRRGRRMSLELPPRPLHEPHDILRRPDLFYPYLPAPFLNGMQQKLNEISVIQQSAGQNGVAKFPGLLGFGAFAGGRPGAASPLERPPSLEGGDERQAAMRELAERGRELAERNRQMREEGDYRSPPAHAPHPQPPAQPSPPTPHHQLPHPLASLPPPARTEGLTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961205;
90% Identity: iTF_00638886;
80% Identity: -