Ecor009608.1
Basic Information
- Insect
- Electrophaes corylata
- Gene Symbol
- -
- Assembly
- GCA_947095575.1
- Location
- OX352714.1:3795640-3799727[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00014 0.0069 16.9 0.2 1 23 182 205 182 205 0.96 2 23 0.0034 0.17 12.6 1.2 1 23 209 231 209 231 0.95 3 23 8.7e-05 0.0043 17.5 2.2 3 23 258 279 256 279 0.94 4 23 9.9e-07 5e-05 23.7 1.4 1 23 285 308 285 308 0.96 5 23 0.0044 0.22 12.2 1.9 1 23 314 336 314 336 0.98 6 23 2.8e-05 0.0014 19.1 0.8 1 23 358 381 358 381 0.94 7 23 2.1e-05 0.001 19.5 3.1 1 23 387 410 387 410 0.95 8 23 0.00038 0.019 15.5 0.3 1 23 416 438 416 438 0.95 9 23 5.8e-05 0.0029 18.1 5.3 1 23 443 465 443 465 0.99 10 23 0.011 0.56 10.9 0.7 1 23 487 510 487 510 0.94 11 23 1.1e-06 5.6e-05 23.5 0.5 1 23 516 539 516 539 0.97 12 23 4.2e-06 0.00021 21.7 0.8 1 23 547 569 547 569 0.97 13 23 0.0025 0.12 13.0 1.1 1 23 589 612 589 612 0.95 14 23 2.6e-05 0.0013 19.2 3.8 1 23 618 641 618 641 0.98 15 23 0.00026 0.013 16.1 2.3 1 23 659 681 659 681 0.98 16 23 0.031 1.6 9.5 0.7 1 23 687 710 687 710 0.90 17 23 0.00054 0.027 15.0 2.1 1 23 716 738 716 738 0.98 18 23 0.012 0.61 10.8 1.8 2 23 745 766 744 766 0.96 19 23 0.00011 0.0054 17.2 1.6 1 23 772 794 772 794 0.97 20 23 4.9e-06 0.00025 21.5 0.5 3 23 802 822 800 822 0.98 21 23 7.3e-05 0.0037 17.8 2.0 1 23 828 851 828 851 0.92 22 23 5.3e-05 0.0027 18.2 5.1 1 23 857 879 857 879 0.98 23 23 0.0001 0.005 17.3 1.2 1 23 885 908 885 908 0.96
Sequence Information
- Coding Sequence
- ATGTCTACCACAACACCTGATTCAGTTCTGTGTCGAGTATGTTTCGCAGATAATATGAAAATGCATGATATCACCAACACTCGGTATCAGGAGATGTTTGAGAAAATGACGGGCGAGACGATGTTGATAGGTGATGGTCGTCCTGACACACTGTGTTTCATATGCCACTCACAGCTCCAAAAGCTCTGGAGGTTTATTGAGATGTCTCTGAACTCTGAGAAAAATCTGACAAAGTTTCTGAATTACGGTGTACAACTAACTCAACTATCAGTAGATCTGCTTGATAGAGTATATCATCAGAACTTGTCAGTTACCTCGGTCAAGCAAACATTTGACTTTACAATTTATGACGGTGTGAAAGAAGAAACTGAAACTCCTGTCAAAATAGAATCATTTGGTGGCAAGCTAGAACAACTTTGTAATGAAATTGAAGATCCTGCTACGGATAATTATAATGACGACTCCGAACCAGACCCATTAGAAGAAGTTGAAGTTGTAACTATTAAAGTTGAATCCAATGAAGCGAAGCTATCAATCACTGCCTATCCATGTGAAGTATGTCCCCGGCGGTTTAACTCTATCAAAGATTTGAATCGGCACAAAGTAACCGTTCATAAACTACAACATAATTGCAGATCGTGTGGCGATACATTTGTAGATCCTAATCTTTTGAAAATACATATGAGATTTCACAAACAAGAAAGTTTTAAGGCATATAGCAATGATAGTGATCGAGAGTCTCTAATGGTTTCCGTGGGGCAGAAATTTGGCTGTGTGCTGTGCAAGAAAACGTTTACCCAGAAAGGACATCTGAAAACACATATTATGGCTTTTCACACCGGCGAAAAACCATTTGCTTGTTCAATATGCGATAAAAGGTTCGTACAAAAAAGCAATCTGGGAACGCATATGAGACATGCGCACACTAAGGAAAAACCTTTCACTTGTACTATTTGCCAGGGAGTGTGCAGGGACGACACCCATTTGAAGGAACACATGGCTATTCACAATGGAGAAACTTCACTAGTAAATGCTATGGATATCATTGAGAATGCTGATGGGGGCAAGCCCTTTACTTGCGGAAGGTGCGGTAAGTCATTTACAGCAAAAGCTCATTTAAAATCTCATGTAATGGCGATACATACTGGAGAGCGACCATTTGCGTGCACTATGTGTGATAAAAAGTACACACAAAAAAGCCATTTAAAATTACACGCAAGGCTGTCACACGTTGTTGAAAAACCGTTCGCATGCGATGATTGCGAAATGAGATTCGATGACGCTGAGTCTTTGAGAAAACACGAAAAATTTCACGCTGAATCCCCTTTTACCTGTACTACGTGCCATAAGGTATTCCTTACGGAAACCAATCTCAAGAAACATATGAAAACTCACAGTGAAACTACAGCGAGCGATGATATCGATGAGAACATGAAAACCTGTACGAAAGTGAAGCCATTCGCTTGCGTATTATGCAGCAAAAGGTTCGGCTGGAAATCTCATTTGAAATCACACATAATGGCAATTCACACTGGTGAAAGACCATATTCATGCTCAATGTGCGACAAAAAGTTCGTACAGCAAAGCAATTTAAGGTTACACGCAAAGGTAGCACACTCTATAGACAGATTGAACCTATACGATTGTGGCATTTGCAACAAAGTGTTCCGGAAGGAGAATACTCTGAAGAAACATATGAGTATTCACGACGAAGAAACTTTAATAGAAAACGATAATGAATATGGTCAAAAGAAAGCTAAGCCGTTTGAATGCATGTTGTGCAATAGGAGCTTTGGCTGGAAATCACATTTAAAAACACATATAATGGCACTACACACCGACGAGAGACCTTTCAAGTGCCCTTTGTGTGATAAAAAGTTTGTCCAAAAATGCTACCTAAGATACCACGTGAAAACAGCTCACCCAGGAGATAGAGCAAAACAGCACATGCTGAACATCGGAGCAGGCAGGCCATTTACATGCAAAATATGCTACATCACATTCGTAAATAAAATAAACTTCGAAAAGCACAAAAAACTGCATACAGATACACCTCCATATTTATGCAACAAGTGTGGTCTAAAGTTTGATACGAAGATCGATTTCGATTCACATAACTTGAGCTTGCATTCCAGAGAGTTGCCGTTTATTTGTAAGACATGTCACTCGCGATTCGAGGACAACGCCGCCCTGAAGACGCATCAGCTTACGCATATGGAGAGAAAATCGCTTACTTGTGATACTTGCAACAGAACATTTCTCGCACACAGCGCTTTAAGACGACACATGTTTATCCACAGTGATGACAAACCTTTCGCTTGCAAACTTTGCAATAAAACCTTTAAGCAAGAACGAATTTTAACGAAACACATGCAAATTCATACTGGGGAGAAAAAGTATGGGTGCGACAACTGTGACAGAAAATTCTACCAAAGAGGTAACTTGATAAGCCATATGAGAATCCACTCTGGAGAAAAGCCATTTGTTTGTGACCGCTGCGGAAACAGTTTCAACCAGAAAAGTCACTTAAGAACTCATGTGTTGTTCATACATAGTTCGGAAAAGCCATTTACATGTACAGTGTGTAACAAAAAGTTTAGGCTTAAGAGTTGTTTGAGGAATCATCAGATGGTTCATACTGGAGAAAGGCCATACCCGTGTGATAAATGTGACAAGAAGTATTATAAAAAGGGCGAATTAAAGTCGCATGTATTAAAAATGCATTCCTAA
- Protein Sequence
- MSTTTPDSVLCRVCFADNMKMHDITNTRYQEMFEKMTGETMLIGDGRPDTLCFICHSQLQKLWRFIEMSLNSEKNLTKFLNYGVQLTQLSVDLLDRVYHQNLSVTSVKQTFDFTIYDGVKEETETPVKIESFGGKLEQLCNEIEDPATDNYNDDSEPDPLEEVEVVTIKVESNEAKLSITAYPCEVCPRRFNSIKDLNRHKVTVHKLQHNCRSCGDTFVDPNLLKIHMRFHKQESFKAYSNDSDRESLMVSVGQKFGCVLCKKTFTQKGHLKTHIMAFHTGEKPFACSICDKRFVQKSNLGTHMRHAHTKEKPFTCTICQGVCRDDTHLKEHMAIHNGETSLVNAMDIIENADGGKPFTCGRCGKSFTAKAHLKSHVMAIHTGERPFACTMCDKKYTQKSHLKLHARLSHVVEKPFACDDCEMRFDDAESLRKHEKFHAESPFTCTTCHKVFLTETNLKKHMKTHSETTASDDIDENMKTCTKVKPFACVLCSKRFGWKSHLKSHIMAIHTGERPYSCSMCDKKFVQQSNLRLHAKVAHSIDRLNLYDCGICNKVFRKENTLKKHMSIHDEETLIENDNEYGQKKAKPFECMLCNRSFGWKSHLKTHIMALHTDERPFKCPLCDKKFVQKCYLRYHVKTAHPGDRAKQHMLNIGAGRPFTCKICYITFVNKINFEKHKKLHTDTPPYLCNKCGLKFDTKIDFDSHNLSLHSRELPFICKTCHSRFEDNAALKTHQLTHMERKSLTCDTCNRTFLAHSALRRHMFIHSDDKPFACKLCNKTFKQERILTKHMQIHTGEKKYGCDNCDRKFYQRGNLISHMRIHSGEKPFVCDRCGNSFNQKSHLRTHVLFIHSSEKPFTCTVCNKKFRLKSCLRNHQMVHTGERPYPCDKCDKKYYKKGELKSHVLKMHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00639191;
- 90% Identity
- iTF_00639191;
- 80% Identity
- iTF_00639191;