Ecor009970.1
Basic Information
- Insect
- Electrophaes corylata
- Gene Symbol
- -
- Assembly
- GCA_947095575.1
- Location
- OX352709.1:565176-571080[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-11 1.2e-08 34.6 0.0 4 39 168 204 165 208 0.90 2 4 2.8e-11 2.5e-08 33.6 0.3 2 39 220 257 219 260 0.92 3 4 1.2e-16 1e-13 50.8 0.1 2 45 275 319 274 319 0.96 4 4 1.5e-18 1.4e-15 56.9 0.0 1 43 326 369 326 371 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGCTCTGGAACTGCTACCGTAAAATGTGAACCTCCGTCAGATGAAGAAGGTGATAGTCCTCAGTTGCCCGATCTCCTCCTTAACACGATTCCATCAGAATTCCATTCAGTAAAAGTTGAAGCAGTTTACCACAAAGATGAGGATATGCCGACATTGCTTCAACACTTACAGAGTCCCGAAGGGCTGGAAGAGCTGGCCCCGCTGGCCCCGGCCGGGCCGGCCGCCATCCCGGTCTGTGTGAAGCAGGAGCCCGTGGAGAACCCAGCCTTCAATCTGGAGACCTTGGAACCAGCTCCACATAGCACAGGTTCGTTGTTGGTGAGACACATGGCGATATTGAGATCATCGGAAGTACCAGACTCCGCCAACTTTACGCCGTTGCGCTTGACGGTCAAGGACGAACACTCTTCCGAAGGAGAACAGCAGCCGCTAAGCGCTGACGAGCTGAGCGACTCGTGCGGTCTACGGGGGGGTGCCAAGGCTTGGTCGCAGCAGGACATGGAGAACGCGCTCGATGCTCTCCGGAACCACAACATGAGCTTGACTAAAGCGTCATCGACATACGGCATTCCGTCGACGACGCTGTGGCAGCGGGCGCACCGGCTCGGCATCGACACGCCGAAGAAGGAAGGCGTCGCCAAGTCGTGGAGCGAGGCCGACCTGCGCGGTGCCCTGCACGCGCTCAGAGCCGGAGCTATATCTGCCAACAAGGCCAGCAAGGCTTATGGTATCCCCAGCAGTACGCTGTACAAGATAGCTCGTCGTGAGGGCATCCGCCTGGCTGCGCCGTTCAACGCGGCTCCCGTGGCGTGGCGGCGCGGTGACCTGCAGCGAGCCCTGGCGGCTATCCGCTCCGGCCGCGCCTCTGTGCAGAGAGCAGCCTCACAGTACGGGATACCTACTGGTACTCTCTATGGACGCTGCAAGCGTGAAGGCATAGAGTTGTCTCGCTCAAACCCTACGCCCTGGTCTGAAGACGCAATGGGAGAGGCCTTGGAAGCTGTCAGGGTTGGCCAGATGTCGATAAACCAGGCGGCTATTCACTACAACTTGCCGTACTCCTCTCTCTACGGAAGATTCAAGCGGTGCAAGTATCAGATTCAGCCAACGCCGCAGCAAGATATACAGAACCCTCCTGAAATGATCCACGGACAGCAGGAATTAAACTACTACCATCAAATGGCCACGTACCCTGAGCAGCATTCCACAGTCCAGCATCCATACCCTCACGAGTTCGCGCCGGACTCCTCACACAACTTGCAAGATCCCTACTCTCAAGCGATGTACTACAACCAGAGCTTCAGCAGCATTGCGACCAGCTGA
- Protein Sequence
- MPGSGTATVKCEPPSDEEGDSPQLPDLLLNTIPSEFHSVKVEAVYHKDEDMPTLLQHLQSPEGLEELAPLAPAGPAAIPVCVKQEPVENPAFNLETLEPAPHSTGSLLVRHMAILRSSEVPDSANFTPLRLTVKDEHSSEGEQQPLSADELSDSCGLRGGAKAWSQQDMENALDALRNHNMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGVAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRGDLQRALAAIRSGRASVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQIQPTPQQDIQNPPEMIHGQQELNYYHQMATYPEQHSTVQHPYPHEFAPDSSHNLQDPYSQAMYYNQSFSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00737387;
- 90% Identity
- -
- 80% Identity
- -