Basic Information

Insect: Eilema griseolum
Gene Symbol: -
Assembly: GCA_963662185.1
Location: OY759241.1:21791259-21809198[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00047 0.061 15.2 0.2 2 23 154 175 153 175 0.93

2 11 0.00036 0.046 15.6 2.6 1 23 181 203 181 203 0.97

3 11 4.8e-05 0.0062 18.3 0.3 1 23 293 315 293 315 0.98

4 11 4.4 5.7e+02 2.7 0.5 2 23 322 344 321 344 0.91

5 11 0.00071 0.092 14.6 0.0 3 23 397 418 395 418 0.90

6 11 0.00035 0.045 15.6 0.1 1 23 432 454 432 454 0.93

7 11 1.7e-05 0.0021 19.8 0.2 1 23 489 511 489 511 0.98

8 11 0.00073 0.094 14.6 0.2 1 23 517 539 517 539 0.97

9 11 0.00041 0.053 15.4 0.3 1 23 545 567 545 568 0.95

10 11 0.12 16 7.6 1.6 1 23 581 603 581 603 0.96

11 11 0.0055 0.71 11.9 0.1 1 20 749 768 749 771 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00047	0.061	15.2	0.2	2	23	154	175	153	175	0.93
2	11	0.00036	0.046	15.6	2.6	1	23	181	203	181	203	0.97
3	11	4.8e-05	0.0062	18.3	0.3	1	23	293	315	293	315	0.98
4	11	4.4	5.7e+02	2.7	0.5	2	23	322	344	321	344	0.91
5	11	0.00071	0.092	14.6	0.0	3	23	397	418	395	418	0.90
6	11	0.00035	0.045	15.6	0.1	1	23	432	454	432	454	0.93
7	11	1.7e-05	0.0021	19.8	0.2	1	23	489	511	489	511	0.98
8	11	0.00073	0.094	14.6	0.2	1	23	517	539	517	539	0.97
9	11	0.00041	0.053	15.4	0.3	1	23	545	567	545	568	0.95
10	11	0.12	16	7.6	1.6	1	23	581	603	581	603	0.96
11	11	0.0055	0.71	11.9	0.1	1	20	749	768	749	771	0.93

Sequence Information

Coding Sequence: ATGGATGGGGAAGGAGTAGACTTCAACCTCCATTGGGAGGAGGAAGTTGTAGTCAAGCATGATCCACATGAAGATGTGACAGAAGAGGTAATATCTGGTCTAGAGAATGTACAAAGCAGCTCATACTCCAACATGTTTACAATAGCAAAACAAATCTATTCAAAAACACAAGACGATATAATAGCTAGTACAGATCAAATGGCTGCGGAGAACTTGATGTACCTGGCACAAGATGTGGTAGGAGGGTATACAGAGACAGCTGAATTAGCTGACGATCCAAATGTAGAGTGTGTCACAGAAGAAGTAATCACAGATGACTGGGTCATTCCTGGAGGACAAGAGAGGGTGGAAGTTCCTATGGATCATCTGACACATCCAGTGATAGACGTAAAAGAGGAGAATGATATTGATGTGCCTCTACCCACTGATCAAGACGAATACACAGCAATGCGACCATGGCCATGCGACTTCTGTTCTCGGCGGTTTCGTAAGAAAGCTGCCCTTATGAACCACATGGTGGCCCATCAGAACGACAGGCCCCACGTCTGCAACCTCTGCGGCGTGCGATACGTGCGCAAGTGCGATCTCATGAACCATCTCAAAGTGCACGCTTTTGTACCGGACAACGCTGATTCTATAGACTATGAACTCTTAGACAATAATCAAGTCGTAAAACCAAAGAAAAAGCGAGGCCGACGGAAAAAGAATCCTGAGCCAGTGGAGAACGGTGTGTGGGAGAACATGACGTCAGCGCGGACGCAGCAGTGGTCGCGCCGAGCCCGGTCGCCTCCCAAGCCGCCCGCCACGCCGCCCTCGCCGCCCTCCGAGCCCTCTCCACCCTCCCCGCCGCCGCCCCCAGCAGACCCCTCCAGGCCATTCGTATGCAGGCATTGTGGCATCGGGTTCGCCAGAGAGAAAGCGCTGCAGTCGCATGCTAGGGTACACGGCGGGGACTCCCCGATAGAGTGCGGCACGTGTGGCGAGCTGTGCTGGTCGCGGGAGGCACTGAACTCGCACACGCAGCAGCGACACCCGCACCTGCCGCCCAAGACCGAGGTGCAGCACGCTGACTACGACGACTCCGACTCAGATGACGACATGGAGTTCCGCCTGTCACCGTTGTCTCACGGCGGCAGCGCCGGCCCGGAGCGAGCCGTGTACGACACGATACGAGGCCCGGAGCTCTTCTGTCAGGATTGTGGCGTCGCCTTCCAAAGGGCTGATTTACTGAGGAGACACGTCGCTGCAGCACACAGTTACAAGCGACACGACAGCACGAGCGCGTGGGGCTCGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTGCTCGCTCACGCCGAGGGACACGCCGAGCGGCAccgcgcgcccgccgccgcctcGCCTGCACCCAGGTTAAAGAGGACGTCTAGAGGGCGAAACAACACGTCGATATCGAATAGTTCAAGGCAATTTCCCTGCAGAGTTTGTGgcaaAGTATTTGGGTCTCGGAGTTCCCAACAAATCCACATACGAATACACACGGGCGAGCGGCCGTACGCGTGCAGGTTTTGCTGGAAGGCGTTCGCCGATGGAGGCACGTTGCGGAAACATGAACGGATACACACAGGAGAAAAGCCGTACGCGTGCGCGGTGTGCCCGCGCGCGTTCAACCAGCGCGTGGTGCTGCGCGAGCACGTGCGCTCGCACCACTCCGCGCCCGACAAGCGCGCCAACGGAGGCCCTGCTTATTGCTGTGTGGTGTGCAGTCGGACGTTGCACTCTAGTGCCGAACTCGTCCAACATTTGATCCAACATTGCGATGCCAATACTGCTCTGAAGCGACAACCACAGACGGGACCACGTAAATACAAACGACGACGGAAATTGAAAACCGACCAGTCTCCCCCGTCGGCGCGCGACTGGCCGCACTCGCCCTCCCCGCCGCCCGCGTCGCGCTCGCCCACGCCGCTGTCGGAGCTGGACGCGCCCGCCACGCCGCCGTCGCCGCCCTCGCCCGCGTCcccggcgcgccgccgccgccgccgcgcctcGCCGCCGCCGCCCCCGCCGCGCCCGCGCATGATCCACACCGAGGAGCGCCCCCGCGCGCGGCGCGGCGAGGGCGCGGGCCGGGGGCGCGGCCGCcagcgccgcccgccgcgccgccccgcCGACGACCTGCGCGCCATCCGCACGCGCGACAGCGTGCGGCGGGAGCCCGCCGAGCCCGACGCGGAGCTGGGCGCCCCGTTCAAGTGTGAGATGTGTTCCCTAGAGTTCCCGCGGCGCGATGATCTGTTGCTACACGTGCCGGTACATATCTGA
Protein Sequence: MDGEGVDFNLHWEEEVVVKHDPHEDVTEEVISGLENVQSSSYSNMFTIAKQIYSKTQDDIIASTDQMAAENLMYLAQDVVGGYTETAELADDPNVECVTEEVITDDWVIPGGQERVEVPMDHLTHPVIDVKEENDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHVCNLCGVRYVRKCDLMNHLKVHAFVPDNADSIDYELLDNNQVVKPKKKRGRRKKNPEPVENGVWENMTSARTQQWSRRARSPPKPPATPPSPPSEPSPPSPPPPPADPSRPFVCRHCGIGFAREKALQSHARVHGGDSPIECGTCGELCWSREALNSHTQQRHPHLPPKTEVQHADYDDSDSDDDMEFRLSPLSHGGSAGPERAVYDTIRGPELFCQDCGVAFQRADLLRRHVAAAHSYKRHDSTSAWGSHTCDTCGESFSDALQLLAHAEGHAERHRAPAAASPAPRLKRTSRGRNNTSISNSSRQFPCRVCGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDKRANGGPAYCCVVCSRTLHSSAELVQHLIQHCDANTALKRQPQTGPRKYKRRRKLKTDQSPPSARDWPHSPSPPPASRSPTPLSELDAPATPPSPPSPASPARRRRRRASPPPPPPRPRMIHTEERPRARRGEGAGRGRGRQRRPPRRPADDLRAIRTRDSVRREPAEPDAELGAPFKCEMCSLEFPRRDDLLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00157451;
90% Identity: iTF_00909103;
80% Identity: -