Ecan050262.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- PLAGL2
- Assembly
- GCA_949126895.1
- Location
- OX421485.1:17434267-17437785[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.47 74 5.8 1.5 1 23 96 119 96 119 0.93 2 18 0.014 2.2 10.6 0.5 1 23 190 212 190 212 0.98 3 18 8.3e-05 0.013 17.6 0.8 1 23 216 238 216 238 0.98 4 18 0.15 24 7.3 2.4 1 23 243 266 243 266 0.89 5 18 0.2 32 6.9 0.2 3 23 275 296 274 296 0.87 6 18 4.3e-05 0.0067 18.5 3.3 2 23 304 326 303 326 0.95 7 18 0.00014 0.022 16.9 3.1 1 23 332 354 332 354 0.98 8 18 0.00021 0.032 16.4 0.4 1 22 360 381 360 381 0.96 9 18 0.014 2.2 10.6 0.0 1 23 428 451 428 451 0.93 10 18 0.022 3.5 10.0 0.1 2 23 478 500 477 500 0.95 11 18 0.0079 1.2 11.4 1.6 2 23 523 544 522 544 0.95 12 18 0.18 28 7.1 0.1 1 23 548 570 548 570 0.93 13 18 0.046 7.2 9.0 4.3 1 23 575 598 575 598 0.96 14 18 1.3 2e+02 4.4 2.8 2 23 606 628 605 628 0.76 15 18 2.1e-05 0.0033 19.5 1.8 2 23 636 658 635 658 0.96 16 18 0.00064 0.1 14.8 1.2 1 23 664 686 664 686 0.98 17 18 1.2e-05 0.0018 20.3 1.3 1 23 692 714 692 714 0.99 18 18 0.00018 0.028 16.6 4.3 1 23 720 743 720 743 0.97
Sequence Information
- Coding Sequence
- ATGATGTTCAAAGGTGTCGACTGCAATACAGACATTAAAATAGAGCCGGAAGTGAGTAAGCTACTGAATTTACTCAAAAAGCCGACATCAGTTAGAAAGAAAGACAACAAAAACGATTGGAGTGTTACCATATCAAAGAAACTCCAGAAAGCAAAGGTATTGGAGGGAGTGGTAGTTCTTGAAACAAACTACATGTGTAAGCCGATAGCTAAGCATTTACACAACATAAGAACCATCCTACTAAATTCCAATGCTACACCGATAAAATCTTACAATGGTATAGGATACACATGCTGCTTTTGCAGCGAGCAATACCCTATACCTATGGATCTAAAGAAACATACTCTAGACAATCACGACAAAGCTGCAAAAGAAAAGTTCATGCAAGGATGTCCCTTGTCAATATATGTTGTGAAGCTAGATATCACCGGCTTAAGATGTGAACTTTGCTGCAATGATTTTGAAGATTTACAGAAATATCAAGAACACTTACAAATTGATCATGACAAAACAATTTATACAGATATAAAAAACCACATACTACCATTCAAATTTGAAGGCGACGGCTTCACTTGCGTGGTTTGTGCCAAAAATTTCGAAAGATTCAAGCTGATACAGGAGCACATGAATTTACACTACAGAAACTATTCTTGCGAGGTCTGCAATTCTCCATTTGTTAACAGTAGAACTCTTAAGAGTCACATGTCGAGGCACAAGCAGGGCGAATTCAACTGCAGCTTCTGTCCGAAAGTTTTTGACACCCACGGCAAGAAAGCGAACCACGAGAAATTTGTACACACAGGTGATCAACGAAGAAACATATGTCCGTACTGTAAAGAAAAATTTATAAGCTATGCAAGGAAAAACGAACATATGGTGGAAGTTCACGGAGTAGAGCCACTTGTGTTGCATTGTAAAGCTTGTGATAAAGAGTTTACAAGACGAGATAAACTGACAAGGCATATAAAGAGAGACCACTTACTTGAAAGACGATTTGAGTGTGACCATTGCGAAAAGAAGTTTTATGGCAGGAAAGAACTGAATACGCACATGGTGAAACATACAGGGGTGAAGCAGTATAGGTGTGAAGTGTGTCTAAAGGCGTTTGGGCGAAATCATACGTTGAAGGAGCATTTACGTGTTCGACGTAACGCCATCGAAACGGATAGTGAAAAACTAATGAAACCGAGGATATATGAGTTGGAAAAGCACCGCAGTAATGTACGAATTATCCTTCAATGCTCAAACGCCACCCCCATTCGATGTATGGGAGGCATCGGTTACGCCTGCAGCTTTTGTGGAGATGAGTACCCAGATCCTGCGGACTTAAAAAGGCATACAATCGAAGGACATGATGATAAGACCAAATTAAAATTCATGGCTGGCAAAATGATGTTCTCATATCTAGTTAAACTTGATATTACAGAGCTTCGCTGTAAAATATGCGATATGGAAATAGATACTTTAGATCTATTAACAGACCACCTCCTCAAAGTGCACGGCAAACCACTTCACTCAGACATCAAAAGCCACATAATGCCCTTCAAATTCGACGATGACGTTTTAACCTGTATGTTCTGCTCAAACGTCTTCAACAAATTCAAGAATCTACAACAACACATGAATGCTCATTTTAGAAATTTTGTTTGCGAATTCTGTGACGCCGGTTTCATTAACCGACATATATTAGCCGCACACACAGAAGCACACAAACTAGGTTCATTCAAATGCGACCTCTGCTCAAAAGTGTTCGATACACACAGAAAAAAGAAAAGCCACGAGAAATCTGTTCATATACACGCGAATTTACTCAGTAAATGTGGGTATTGTAACTTAAAATTTACCAATTACAAAAGGCGGGACCATCATCTGGTTAAAGTGCATGGCGTACTTCTGAAAGCCGTTAAATGTCACGCTTGTGATAAGTCGTTTGATAATAAAAGTGCTTTGACTATACACACGAAACGAGACCATTTGATGGAGCGGAGGTTTAAGTGCAATCAATGTGATATGAACTTCTTTGGATCTAATGAGCTGAAGTTACATATGGTGAAGCATACAGGATTGAGAGAATTCAAGTGTGATGTGTGCTTGAAGTCTTATGGGAGAAAGAAGACTTTGACAGAACATATGAGAATACATAATGATGATAGACGATTCAAATGTGAGCATTGTGGACAAGCGTTCGTTCAGAAGTGTAGCTGGAAAGGCCATATGAGAAATAGGCACGGAGAGCTCGTCTGA
- Protein Sequence
- MMFKGVDCNTDIKIEPEVSKLLNLLKKPTSVRKKDNKNDWSVTISKKLQKAKVLEGVVVLETNYMCKPIAKHLHNIRTILLNSNATPIKSYNGIGYTCCFCSEQYPIPMDLKKHTLDNHDKAAKEKFMQGCPLSIYVVKLDITGLRCELCCNDFEDLQKYQEHLQIDHDKTIYTDIKNHILPFKFEGDGFTCVVCAKNFERFKLIQEHMNLHYRNYSCEVCNSPFVNSRTLKSHMSRHKQGEFNCSFCPKVFDTHGKKANHEKFVHTGDQRRNICPYCKEKFISYARKNEHMVEVHGVEPLVLHCKACDKEFTRRDKLTRHIKRDHLLERRFECDHCEKKFYGRKELNTHMVKHTGVKQYRCEVCLKAFGRNHTLKEHLRVRRNAIETDSEKLMKPRIYELEKHRSNVRIILQCSNATPIRCMGGIGYACSFCGDEYPDPADLKRHTIEGHDDKTKLKFMAGKMMFSYLVKLDITELRCKICDMEIDTLDLLTDHLLKVHGKPLHSDIKSHIMPFKFDDDVLTCMFCSNVFNKFKNLQQHMNAHFRNFVCEFCDAGFINRHILAAHTEAHKLGSFKCDLCSKVFDTHRKKKSHEKSVHIHANLLSKCGYCNLKFTNYKRRDHHLVKVHGVLLKAVKCHACDKSFDNKSALTIHTKRDHLMERRFKCNQCDMNFFGSNELKLHMVKHTGLREFKCDVCLKSYGRKKTLTEHMRIHNDDRRFKCEHCGQAFVQKCSWKGHMRNRHGELV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01166955;
- 90% Identity
- iTF_01166955;
- 80% Identity
- -