Basic Information

Insect: Eilema caniola
Gene Symbol: JRKL
Assembly: GCA_949126895.1
Location: OX421462.1:14315163-14317076[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.2e-07 7.8e-05 24.0 0.0 3 38 16 51 14 55 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.2e-07	7.8e-05	24.0	0.0	3	38	16	51	14	55	0.92

Sequence Information

Coding Sequence: atgCCTCGTAATTACAAAAGAAAGACCAAACCGATATACAGTGTTGAAGATCTCAAAAAGGCTATAGACGatgttaaaactaaaaaactCAGTATCGGCAGAGCAGCGGAAACTTATAAGGTTCCAAAAACAACGATTTTTGATCACCTAAAGAAAGCAGTTATAAAACTGCCAAGGTCTGGACGAAAACCTTTATTTACGGACGAGCAGGAAACGCAACTTGTCGATTATATTATAAAGTGCAGTAAACTCTATTATGGCCTAACCATAAAACAAATTCGCCAAATCGCATACCAATATGCAGAGAAGAACAAACTTCCGCACAATTTCGACAGAGTTAAAAAGCTAGCCGGAAAAGATTGGTATTACGGTTTCATGAAAAGACATCCCAGCATATCTTTGAGGACACCTGAGGCGACTTCACTGAATCGTATCACAGCGTTCAATGAAACTGATGTTAAagtattttatgataatttgaAGGCCATACAAGACAAACATCACATTCAACCtgataaaatctttaacgtCGATGAGACTGGTATATCAACGGTCCAAAGAAATCAGAAAATAGTGGCAGTAAGAGGTCAGAAACAAGTTGGTAAGGCAACGAGTGCTGAAAGGGGGTCTACAACAACAGTTGTTTGTGCATTTAGTGCAGCCGGCCAATACATTCctccattttttatatttaaaaggaaGCGTATGAATCCACAATTACTAAAAGGTAGTAACCTTAACATGGTTGGGACTGTGTCAGATTCTGGATGGATAAATGAAAGCCTATTTGTGGATTGGCTACACCACTTCATTTCATATGCAAAGCCTTCAAAGGTAGATCCCGTTTTGCTCATTTTAGATAACCATGAGAGTCATATAAGTCTTGATGCATTCTCACTCTGCAGAGAACATGGAATCATTATGCTAACTCTGCCACCACATACCTCACATAAACTCCAACCCttggatttgacatattttggcCCTATCAAGACTGCATATAATCAAGAATGTGAGAATTATATGGCAGATCGATTTGGAAAGCCCATTACACAATACGACATAGTCGAATTGTTTACAAATGCTTTTAACCGTTGCAGTAACCTTGAAAAAGCTGCAAGTGGATTTAGATCTGCAGGAATATATCCCTTGCGCCCCATTGAGCTAGATTCAATTCAGCCCTATATATCGCAGAATACCGCACAAGCAACAATAAATCAAACACAAAACATTCATATGAATACCCAACCTTCAGATAACCAAGCAACTGACGTTCAACAAGATCCTGATGATGATCAAAATCATGCCAATATAACTGCAGTAGCCCAAGTTCACAGTGTTGAAGATCTTGATGTCCAGGCTTCCGATATAGGTCCTGTGAATTCACAAAGCAATGATATAAGCACGAATGCAGTTTCCCTATCCGAGATAGTTGAATTGCCTATTATTTCTCCAAAAATATCAAAACGCAATATCAGGAAGAAAAGATCAACTATTCTTACGAGCACACCTTTAAAAGGCCAGTTAGAGGAAAAGGAAAACAGGAAAAGAGCTAAAGCAGAAGAAATCAAGAAGAAACCAGAAACAATGCCAGAAAAAGGATCTCAAATAAAAAGACTGAAATGCAGTGATAAGACACCTTTAAATAGACAGACTAAAAGAGTATTAAAGAATTTCAAGAATATACAAGTCTTTAGTGACCCCAGTCAAAAcacgaaagaaaaagaaagagaaaaagaaaaaggtgAAAAGCAAAATGAAGaatacttttgtattttttgtggaGATAAATATATAGAACCCCCCCCTGAAGACTGGATTATATGCTACGTGTGCAAAAATTGGGCTCACGAGAATTGTACTGACGGACAGTCAACATCGTTGGGTTATAAATGTGATCTCTGTCGTTATTAA
Protein Sequence: MPRNYKRKTKPIYSVEDLKKAIDDVKTKKLSIGRAAETYKVPKTTIFDHLKKAVIKLPRSGRKPLFTDEQETQLVDYIIKCSKLYYGLTIKQIRQIAYQYAEKNKLPHNFDRVKKLAGKDWYYGFMKRHPSISLRTPEATSLNRITAFNETDVKVFYDNLKAIQDKHHIQPDKIFNVDETGISTVQRNQKIVAVRGQKQVGKATSAERGSTTTVVCAFSAAGQYIPPFFIFKRKRMNPQLLKGSNLNMVGTVSDSGWINESLFVDWLHHFISYAKPSKVDPVLLILDNHESHISLDAFSLCREHGIIMLTLPPHTSHKLQPLDLTYFGPIKTAYNQECENYMADRFGKPITQYDIVELFTNAFNRCSNLEKAASGFRSAGIYPLRPIELDSIQPYISQNTAQATINQTQNIHMNTQPSDNQATDVQQDPDDDQNHANITAVAQVHSVEDLDVQASDIGPVNSQSNDISTNAVSLSEIVELPIISPKISKRNIRKKRSTILTSTPLKGQLEEKENRKRAKAEEIKKKPETMPEKGSQIKRLKCSDKTPLNRQTKRVLKNFKNIQVFSDPSQNTKEKEREKEKGEKQNEEYFCIFCGDKYIEPPPEDWIICYVCKNWAHENCTDGQSTSLGYKCDLCRY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00636337; iTF_00636326; iTF_01170515; iTF_00819094; iTF_01438861; iTF_00628207; iTF_00357403; iTF_00357404; iTF_00357405; iTF_00357406; iTF_00357407; iTF_00357408; iTF_00695463; iTF_00011918; iTF_01000474;
90% Identity: iTF_00628207;
80% Identity: -