Dtri016280.1
Basic Information
- Insect
- Dysmachus trigonus
- Gene Symbol
- JRKL
- Assembly
- GCA_949715965.1
- Location
- OX454320.1:68382573-68384156[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-08 1e-05 26.5 0.0 3 38 16 51 14 57 0.91
Sequence Information
- Coding Sequence
- atgcctcgaaattacaaaagaaagacccAAACCAAGTACAGTCTAGAAGATCTGAAAAAGGCTATAGatgatgttaaaaataaaaaactcagCATCGGCAGAGCAGCAGTAACTTATCATGTCCCAAAAACAACTATTTTTGACCACCTAAAGAAAGCAGTGATAAAACAGCCAAGGTCTGGACGAAAACCTTTATTTACAGACGAGCAGGAAGCGCAACTTGTCGATTATATCATAAAGTGCAGTAAACTCTATTATGGCCTAACCATTAAAAAAATTCGCCAAATCGCGTACCAATATGCAGAGAAGAACAAACTTCCGCACACTTTCGATCGAGAGAAACAGCTAGCCGGAAAAGACTGGTATtacaatttcatgaaaagaCATTCCAGCATATCTCTGAGGACACCTGAGGCAACTTCACTGAATCGTATCACTGCGTTCAATGAAACTGACGTTAAtgttttttatgataatttgAAGGCCATACAAGACAAACATCATATTCAACCTGATAAAATCTTTAATGTCGATGAGACAGGTATATCAACGGTCCAAAGAAATCAGAAAATAGTGGCAGTAAGAGGTCAGAAACAAGTTGGTAAGGCAACGAGTGCTGAAAGGGGGTCTACAACAACAGTCGTTTGTGCATTTAGTGCAGCCGGCCAATACATTcctcctttttttatatttaaaaggaaGCGTATGAATCCACAATTACTAAAAGATAGTAACCTTAACATGGTTGGGACTGTGTCAGACTCTGGATGGATAAATGAAAGCCTATTTGTGGATTGGCTACACCATTTCATTTCATATGCAAAGCCTTCAAAGATAGACCCCGTTTTGCTCATTTTAGATAACCATGAGAGTCATATAAGTCTTGATGCATTCTTACTCTGCAGAGAACATGGAATCATTATGCTAACTCTGTCACCACACACCTCACATAAACTGCAACCCTTGGACTTGACATATTTTGGCCCTATCAAGACTGCATATAATCAAGAATGTGAGAATCACATGGCAGATCGATCAGGACAGCCCATTACACAATACGACATAGTCGAATTGTTTACAAACGCTTTTAACCGTTGCAGTAACCTTGGAAAAGCTGCAAGTGGATTTAGATCTGCAGGAATATATCTCTTCCGCCCCATTGAGTTAGATTCAATTCAGCCGTATATATCTCAGAATACCGCACAAGCAACAATAAATCCAACACAAAACATTCGTATGAATACCCAACCTTCAGATAACCAAGCAACTGACGTTCAACAAGCTCCTAATGCTCACAATCATGCCGATATAACTGCAGTAGCCCAAGTTCACAGTGTTGAAGATCTTGATGTTCAGGCTTCCGACAAAGGTCCTGTTAATTCACAAAGCGATGATATAAGCACGCATTCAGTTTCCCTATCCGAGATCGTTGAATTGCCTATTATTCctcaaaaaatatcaaaacgcAATAACAGGAAGAAAAGATCAACTATTCTTACGAGCACACCTATAAAAGACAAGTTAGAGGAAAAGGAAAACAGAAAAAGAGCTAAAGCAGaagaaatcaagaaaaaatcagaataa
- Protein Sequence
- MPRNYKRKTQTKYSLEDLKKAIDDVKNKKLSIGRAAVTYHVPKTTIFDHLKKAVIKQPRSGRKPLFTDEQEAQLVDYIIKCSKLYYGLTIKKIRQIAYQYAEKNKLPHTFDREKQLAGKDWYYNFMKRHSSISLRTPEATSLNRITAFNETDVNVFYDNLKAIQDKHHIQPDKIFNVDETGISTVQRNQKIVAVRGQKQVGKATSAERGSTTTVVCAFSAAGQYIPPFFIFKRKRMNPQLLKDSNLNMVGTVSDSGWINESLFVDWLHHFISYAKPSKIDPVLLILDNHESHISLDAFLLCREHGIIMLTLSPHTSHKLQPLDLTYFGPIKTAYNQECENHMADRSGQPITQYDIVELFTNAFNRCSNLGKAASGFRSAGIYLFRPIELDSIQPYISQNTAQATINPTQNIRMNTQPSDNQATDVQQAPNAHNHADITAVAQVHSVEDLDVQASDKGPVNSQSDDISTHSVSLSEIVELPIIPQKISKRNNRKKRSTILTSTPIKDKLEEKENRKRAKAEEIKKKSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636334;
- 90% Identity
- iTF_01438861; iTF_00636334; iTF_00636337; iTF_00636326;
- 80% Identity
- -