Ecan005066.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- -
- Assembly
- GCA_949126895.1
- Location
- OX421460.1:25168441-25168803[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-11 3.5e-08 34.8 0.0 4 41 28 66 26 70 0.86
Sequence Information
- Coding Sequence
- ATGGTACGAAAATATACAAGAACATATAGAAACCTGAGAAATGGTAAACGTTTCATGCCATACTTCTCTTATTGTTCTGGTGACTTGAACAAGGCTGTATCTGATGTTAAATCTAAAAAACTGTCTACCAGAGAAGCAGAAAAGAAGTATGGTGTTCCCAAAAGTACAATAAGCTGGCATTTAAAAGAGGAAAACGTAGTCTATTCAAGACCAGGGCATCCTACATTATTTTCGGAGGCGGAAGAGAAAACGTTTATCAATTATATCAAACATATGGGAGAATGGGGATTTCCCCTAGATCTAATGGATTTGAGGGTCTTCgcccaaaaatatttaaaaaaaaataggaagaACGGTTTATAA
- Protein Sequence
- MVRKYTRTYRNLRNGKRFMPYFSYCSGDLNKAVSDVKSKKLSTREAEKKYGVPKSTISWHLKEENVVYSRPGHPTLFSEAEEKTFINYIKHMGEWGFPLDLMDLRVFAQKYLKKNRKNGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667307; iTF_00667300; iTF_01526960; iTF_00237394;
- 90% Identity
- -
- 80% Identity
- -