Ecan012378.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- -
- Assembly
- GCA_949126895.1
- Location
- OX421462.1:28777441-28779750[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 4.2e-08 34.5 0.2 1 40 13 52 13 57 0.89
Sequence Information
- Coding Sequence
- ATGGAAACAGGTAATAAAAAGCGACGTGGTGTATGGACTGAACAGCAACTTAAATCTGCAATTGAGGCTATAAAATACGGTCGTATGTCACAAAGAAAGGCAGCAGCTACCTTTAATATCCCACGACGAACTATTCGAAATCACCTTAAATCTGGCAGTGCAGAAAAGAGAACTGGCCGATCAACTACTCTAACTGACGCCCAAGAAAAAGATTTAGCAAGACGAATAATTCGACTTGCTCAAGTAGGCGTTCCGTTAACGCGCAAGATTGTGAGAAAGCAAGCCTACTTATTTTGTCAAGCCAATGAAATACCAAATACTTTCAATGACGTCAAATGCATAGCAGGTAGAAAATGGCTCTCGAATTTTTTAAAACGAAACCCTGAAATTTCAGTTCGCAAAGCACAGTTTATGAACTCTGCAAGGGCTCAAAAATTGAACAAGTACATTGTGCAACAGCATTTCGcggctataaaaaaaatatatgatgagTTAGATATTCCTCGGCATCCAGAACGTTTATATAATATAGATGAAAAGGGATGTCGGTTAACATTGCACCACCAGCAACATGTTCTTGCACAAAAAGGCAGTAAAAGAGTTCATTTTATCGCACAGGAGCATGCTGAAAACGTCACCATCGCTATGTGTGTCAATGCTTCAGGTAATTCAGTACCACCAATGATAATATTTAAAGGTAAAAGGCTAAGGCCagaatttaatgataatttgcCTGATGGTACTATAGTCAAAATGGCACCAAAAGGTAGCATGACTACTGAATTATTTATAGATTTCATCCATCATCTCGGCAACTACAAGTCGCCTGGAAAATGTTTGCTAGTTTTTGATGGAGCTGCTTCGCATTTGGATGCTAGGATTGTGGATGCCGCAGACGAAAACCAAATCGTATTATATTGTTTACCCTCAAATACCACCCATGAGTTACAACCATTAGATAAATCAGTGAACAAATCATACGAACATCATTGGGATGAAGAAGTCTTGTCGTACGCCTATCGTCACCCAGACCGCAAACTAACGAAGGCAAGGTTTAACAAAATTTTCTCTAAGGTGTGGCCTAAATGTGTAACTCTAGATAACATAAAAAATGGGTTTAGAGCTACTGGACTCCATCCCTATAATCCAAATGCGATTCCCGAGGAGGCTTTTGCACCTTCCATTCTTACTAATAGACCTGCTCTTGATGAAACCGCTTCTAACTCAGTTGCTTCAAAAGCTTTAGAACAGTCCGTGGTTAATGATTCTGATACAGATTGTGAAGAAAGCTTTTGTATGTCACCGTCAATAATAACTAAAGAAAATGTTGATTTTGACTGTTGCTCTGAACCTAGAACTTTGCTACATCTGCCTCAGCCTTTGTCTAGATATTCATCCTCACCTTCATCTACTCTTCGAGCACAGAAACATTCACCAACCTACGCCTGTAGGAAATTGGTTGAATACAGTTCCTCCACCGAATCTACTACTACTATTGATATTATAGAACAATCTACAGCAACAGACTTGAATGTATATAATAGAGAGTCACAATTTCAATCTCCAATTCCCAGCACCTCTGGGTTAGGACAGAATTTTCTACAAAGACCAGTAATAAATTCTTCCACATCAGACGAAGatgatgaaaatattgacataaACGCATTACAAAAATACTTTCAATATCCTGCCAGGAGTAGTAAAATTTATACGTCATCGGAATCAGAGGAATCAAAACTGGATCCGTCTGATGAAATACCAGCGTGCACAGAAGGAAATACACGCAGAAAAACCCAAATAGAAGATCACCAGTCTGAAGATTCCGACAATGTGCCACTATTAGATTTGAAACAAACTATTAAGAAAACACAAAAGAGGTCTCCATTTCACGAACTTATACCTACACCTAACTTTGCAATAGTAAAGAATAAACAAAGACGAAAAGCAATTAATTATATTGGTCAAAAGGTGACTAAGGACTTATTTGATAatgttaaagaaaaaaaagaaaagaaaacgaTTACAGCAATATCGAGAATTGTAAACCGAAGTAAGAACAAAATTAATATAGGCGAGAAGAAAGTGGATAAGAAGAAGTTGAGAGAAAAGAAGATAAAACATAAgaaagttaatgttaaaaaaagttTACGATCAAAAAATAAGACTGAAAATTGGTATTGCTCAGCATGTAAAACTGAAGTAGTGAGGGCTATGCGAAAATGTATTAGTTGTTTATTGTGGTACCACGAAGAATGTGTGGGATTAACTAAAGAAGACCTAGAGGATTTCATATGTCCAGAATgcaactaa
- Protein Sequence
- METGNKKRRGVWTEQQLKSAIEAIKYGRMSQRKAAATFNIPRRTIRNHLKSGSAEKRTGRSTTLTDAQEKDLARRIIRLAQVGVPLTRKIVRKQAYLFCQANEIPNTFNDVKCIAGRKWLSNFLKRNPEISVRKAQFMNSARAQKLNKYIVQQHFAAIKKIYDELDIPRHPERLYNIDEKGCRLTLHHQQHVLAQKGSKRVHFIAQEHAENVTIAMCVNASGNSVPPMIIFKGKRLRPEFNDNLPDGTIVKMAPKGSMTTELFIDFIHHLGNYKSPGKCLLVFDGAASHLDARIVDAADENQIVLYCLPSNTTHELQPLDKSVNKSYEHHWDEEVLSYAYRHPDRKLTKARFNKIFSKVWPKCVTLDNIKNGFRATGLHPYNPNAIPEEAFAPSILTNRPALDETASNSVASKALEQSVVNDSDTDCEESFCMSPSIITKENVDFDCCSEPRTLLHLPQPLSRYSSSPSSTLRAQKHSPTYACRKLVEYSSSTESTTTIDIIEQSTATDLNVYNRESQFQSPIPSTSGLGQNFLQRPVINSSTSDEDDENIDINALQKYFQYPARSSKIYTSSESEESKLDPSDEIPACTEGNTRRKTQIEDHQSEDSDNVPLLDLKQTIKKTQKRSPFHELIPTPNFAIVKNKQRRKAINYIGQKVTKDLFDNVKEKKEKKTITAISRIVNRSKNKINIGEKKVDKKKLREKKIKHKKVNVKKSLRSKNKTENWYCSACKTEVVRAMRKCISCLLWYHEECVGLTKEDLEDFICPECN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00637484;
- 90% Identity
- iTF_00637484; iTF_00637485; iTF_00302030; iTF_00637486; iTF_00637487; iTF_01166551; iTF_01166554; iTF_01166555; iTF_00907804; iTF_01166556;
- 80% Identity
- -