Ecan015666.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- HSFX4
- Assembly
- GCA_949126895.1
- Location
- OX421464.1:21808994-21810901[-]
Transcription Factor Domain
- TF Family
- HSF
- Domain
- HSF_DNA-bind domain
- PFAM
- PF00447
- TF Group
- Helix-turn-helix
- Description
- Heat shock factor (HSF) is a transcriptional activator of heat shock genes [1, 4]: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs [1]. Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus [2]. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats [3]. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear [2]. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus [3]. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-23 3.9e-19 70.7 0.0 1 100 13 113 13 113 0.87 2 2 0.86 1.3e+04 -1.6 0.0 40 56 117 133 115 172 0.83
Sequence Information
- Coding Sequence
- ATGCAAGATGATAAAAATGCTATATTTCAAATGCGTTTTCCACAGAAATTGtggtatttattgaatttaCGAACTGATGCCATATTATGGGGCGGTACAGGAAGAACTATTTTGCTAAACTATCGTGTTCTTCATAATTATTTGCAGTGCGATCattcaatatttaaaacaaCTAACATTTCGAGCTTTGTGAGACAGCTGAATTTATATGGCTTTCGGAAAGTTACTTCGCATTTACAAGATCCTCTTTGTAATTCTAGTAATCcatatatgcatgaatatgttcaTGATTACTTCCAATACGGTCGACCTGAATTACTTAGCAAAATAACTCGAAAAGCGTTGGCCATGAAAAGGAACTTTAAGCCCAAAAACTTATACAGCAATGTTGAGCAATTGCTGTACCTGACTCCACTCCAGAAAGCCCGTAGAGCTTTACACATAGCATTGAAGAAAGCTGCCCAAGATTTATATGTACAAAACTCACCTAAAGATTTCTGCAATTTGAAGTTCGAATGTGAAGACTCGCAGGATGATTACTGTGAAGATGAAGAAAATATAGAGCTTGATTGGCTAATGACAAATGATAATACAACAACTCCAGAAAAAGTTCTGCCTGAAACAGCTAATGATCATGTTCCTAAGATTGACGTCACAGTTCCAATGAAAGAGGAAACTCATAACTACAGGGATACATCACAAGATGCTCTCATGAACTTCAATGATGACACATGTCAACAGAGTAATGACAATTTTGCGGCACCATTTTTGAGCATGCCAGAACTAGATCCAGAGCCTTCTGCAGAACACTCTGGTGTTGAGTTGCTAGGAGAGTTTAACATTGACAATGATGCTGACCAGGACATCACTAGGAAGATTGGTGAAAAAGAAGTAGATCACAACTTTTTGAATTGTGTTCTTCCTTCAATCAGCACTGATCACATTGATGATGTGTCAATGTCTATGGCTGagAAAAACAATGATGATTCAGACCACTATCATGGAGAATGGGACCAAATGTTTAATGATATTATGACCAACAAAGGTCCAAATCAAGAGTGTGGATCTGATCTGAAGGAACTTTACTCCCAAATCTCAAAAACTATAGATTTACTTAATTCTTAA
- Protein Sequence
- MQDDKNAIFQMRFPQKLWYLLNLRTDAILWGGTGRTILLNYRVLHNYLQCDHSIFKTTNISSFVRQLNLYGFRKVTSHLQDPLCNSSNPYMHEYVHDYFQYGRPELLSKITRKALAMKRNFKPKNLYSNVEQLLYLTPLQKARRALHIALKKAAQDLYVQNSPKDFCNLKFECEDSQDDYCEDEENIELDWLMTNDNTTTPEKVLPETANDHVPKIDVTVPMKEETHNYRDTSQDALMNFNDDTCQQSNDNFAAPFLSMPELDPEPSAEHSGVELLGEFNIDNDADQDITRKIGEKEVDHNFLNCVLPSISTDHIDDVSMSMAEKNNDDSDHYHGEWDQMFNDIMTNKGPNQECGSDLKELYSQISKTIDLLNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01363018;
- 90% Identity
- iTF_00637413; iTF_01435977; iTF_01502007; iTF_00282186; iTF_00677456; iTF_00677457; iTF_00281049; iTF_00823838; iTF_01360539; iTF_00157125; iTF_00441413; iTF_01197642; iTF_00706859; iTF_00404620; iTF_00822828; iTF_01166515; iTF_00908735;
- 80% Identity
- -