Basic Information

Insect: Ectropis grisescens
Gene Symbol: -
Assembly: GCA_017562165.1
Location: chr10:9442955-9456499[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.011 0.59 10.7 0.9 3 23 209 230 208 230 0.90

2 24 1.8 1e+02 3.7 1.5 3 23 587 609 586 609 0.84

3 24 0.028 1.6 9.4 0.3 1 21 614 634 614 635 0.96

4 24 4.7 2.7e+02 2.4 0.2 1 23 676 699 676 699 0.89

5 24 0.0002 0.011 16.1 1.6 3 22 710 729 710 729 0.96

6 24 0.72 41 4.9 0.1 3 23 738 759 736 759 0.90

7 24 0.06 3.4 8.3 0.6 3 23 780 801 778 801 0.96

8 24 0.019 1.1 9.9 0.9 1 23 807 830 807 830 0.92

9 24 0.095 5.3 7.7 0.0 1 23 855 878 855 878 0.90

10 24 0.0041 0.23 12.0 3.5 1 23 883 905 883 905 0.97

11 24 0.0022 0.12 12.9 0.2 1 23 911 934 911 934 0.94

12 24 0.0031 0.18 12.4 1.3 1 23 941 963 941 963 0.97

13 24 0.00013 0.0076 16.7 1.8 1 23 1013 1036 1013 1036 0.97

14 24 0.0054 0.3 11.6 1.4 1 23 1096 1119 1096 1119 0.96

15 24 0.0007 0.04 14.4 2.0 2 23 1145 1167 1144 1167 0.95

16 24 0.22 12 6.6 0.1 3 23 1174 1195 1173 1195 0.94

17 24 0.0075 0.42 11.2 0.2 1 21 1239 1259 1239 1260 0.95

18 24 0.00093 0.052 14.0 0.6 1 23 1270 1292 1270 1292 0.93

19 24 8.5e-05 0.0048 17.3 0.3 2 23 1388 1410 1388 1410 0.93

20 24 5.8e-07 3.2e-05 24.1 1.3 3 23 1417 1437 1416 1437 0.98

21 24 0.079 4.5 8.0 1.0 1 23 1453 1475 1453 1476 0.94

22 24 0.16 8.9 7.0 0.0 1 23 1497 1519 1497 1519 0.98

23 24 0.021 1.2 9.8 0.6 1 23 1525 1548 1525 1548 0.95

24 24 0.0002 0.011 16.2 0.4 1 23 1556 1579 1556 1579 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.011	0.59	10.7	0.9	3	23	209	230	208	230	0.90
2	24	1.8	1e+02	3.7	1.5	3	23	587	609	586	609	0.84
3	24	0.028	1.6	9.4	0.3	1	21	614	634	614	635	0.96
4	24	4.7	2.7e+02	2.4	0.2	1	23	676	699	676	699	0.89
5	24	0.0002	0.011	16.1	1.6	3	22	710	729	710	729	0.96
6	24	0.72	41	4.9	0.1	3	23	738	759	736	759	0.90
7	24	0.06	3.4	8.3	0.6	3	23	780	801	778	801	0.96
8	24	0.019	1.1	9.9	0.9	1	23	807	830	807	830	0.92
9	24	0.095	5.3	7.7	0.0	1	23	855	878	855	878	0.90
10	24	0.0041	0.23	12.0	3.5	1	23	883	905	883	905	0.97
11	24	0.0022	0.12	12.9	0.2	1	23	911	934	911	934	0.94
12	24	0.0031	0.18	12.4	1.3	1	23	941	963	941	963	0.97
13	24	0.00013	0.0076	16.7	1.8	1	23	1013	1036	1013	1036	0.97
14	24	0.0054	0.3	11.6	1.4	1	23	1096	1119	1096	1119	0.96
15	24	0.0007	0.04	14.4	2.0	2	23	1145	1167	1144	1167	0.95
16	24	0.22	12	6.6	0.1	3	23	1174	1195	1173	1195	0.94
17	24	0.0075	0.42	11.2	0.2	1	21	1239	1259	1239	1260	0.95
18	24	0.00093	0.052	14.0	0.6	1	23	1270	1292	1270	1292	0.93
19	24	8.5e-05	0.0048	17.3	0.3	2	23	1388	1410	1388	1410	0.93
20	24	5.8e-07	3.2e-05	24.1	1.3	3	23	1417	1437	1416	1437	0.98
21	24	0.079	4.5	8.0	1.0	1	23	1453	1475	1453	1476	0.94
22	24	0.16	8.9	7.0	0.0	1	23	1497	1519	1497	1519	0.98
23	24	0.021	1.2	9.8	0.6	1	23	1525	1548	1525	1548	0.95
24	24	0.0002	0.011	16.2	0.4	1	23	1556	1579	1556	1579	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCCCGAGGCGAAATACTGCCGATTTTTCCTACCACCAGTTCGGATGACACAGAACCTCCCGTCCTCGTCACGAAAATCAAGGATTGCGTGTCTGTCCAGataacCGAAAATGACGAACTGCCGACAAATGTCTGCAGAAAATGCATGGACAATGTCAATAACTGGCATATATTCAAGACTGTCTGTGAAAAGACACAAAATAAACTACAGTCTCTGATCAAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAATAAAGAGTGAACCATTGTATGATGAAGCCTATGATGAtggagtggtcattgatggttCCTACCCAGTTATTGAGAATGTGGCTTCGACCAGCAAACTTCAGCCTGAAGGTCCCCCAATTTTGGCTTCATTGGGGCTCACACCGAGAAGTGACAAGGGTGTGGAAAGTGAGAACAACGAAGAAGACTATGAGGAAGAAATGCCCGAGCCGGAACAAGAGCCTCAGCCTGAGAAGGGGCCTGAGATGCCCGAGGTATCCATTACCGTGACGCGCAATACAGGGGAAACGCTCCACGCTCGCCAAGGCATCCACCAGCTTGCCTCCAAAGACTGCTTAATTTGCGGACGCACCTACAGATACTCCCATAACGCCCGCAGGCACGAACTGGCCTCCCATAGCTTCGACAGATACACAAACAAAGTAACGAACAAAAAGTCACATCACTCTCGCATGATGCCCAAACTCAGGCCAAACCCTTTCAACCCTAAAGCTCGTCTTATGCCCAACCCTATCAGCCACAAACTTCAATTCATGCCCAAAAATATTCCCGCCAAAATAATCCCACAGAAAGTAATTCTCCCACCGAAACCGATACCAgttaaaactactaaaacgCAAAATAATTTACCGTATCCTTTACGTATCAAAGCGCTTAAGGACCTGCAGATAAGGAAGAAGGAACCTCAAATTTTGAAAACGTTGCTCACCGCGAAACCCGAGGTTTTGGTTTCGGAGCCGGAAATAATGAATTCTGGACCGGAGAGTCCGGAGACGCTAATATCAGAACCGGAAATTGCGTCTTTCCAAGTAGAGACAATTTTGTCGGAGCCCAATGATTACGATCAAAATCAAGAAGACGATGGTGAAATTGATGGTGATAATGGGATGGAACAGACCCAAAACTACGACACAGTCGAGATGGAATCCGACCACGAGATCGAGATCGCTCGCCAGCAAGCAAACGACATAGGAGTCCTGGACAAGGACAGTTTTGTTGAAAACAACGATGAAAACATTCAAGAAGAGGATCAAGATAATCATGTCAATGAAACTGAGAAGCACGGGGAAAGCGAGAACGAAGGCGATCAAGACACTGTTGACAGTCAAGGTAATATGGAGATTGATGAAAGTTATAGTAACTCTAACATCGTGGACATGCAGAAAGATAAAGATGACCCTGACGATATAGACAACGATGAACAAGAAGTGAATCCTGACGCCGATGATAATGATGACGAGGAAGACATGCCCCCGCCTCCCGTCGTTGAACTAACCGAGGAAATGCAACACTCATCCAGCGAAATGAACGAAGAGGAAGAAGAAATGGATGAATCCGCCGACCTCAACGAAACCGCCGAAGACAAAGAGACAGCCCTCGACCCCGACAAGACGTACGTCACTAAAACACAAAAAGAGTTCATCGAAAAATACCGCGACGTCAtccaacaaataaatacaaaacgaTGCCTCTGCTGCGATAAAACATATCCGAGAAGAAAAGCCGTCGTACAACATTTGCAGAAAAATGGACATAAAGTGCCCAAACATACATGTTACAATTGCGTGATCACGTTTACTCATATCGGAGCATTACTCAGTCACATGCGAGCGAACGCTTGTACAGATTTGTGGAAAATCGTCTTCGATAAGAACGGTATTCCTGATGATATGGTCATCAAATATGAGCCTCAGGCTAAGATTCAGCCTAAGGATATTTTCAACGCACGGTCTTACGCTTGCAGGCTCTGCCCGGCTAAGTTCCAATTGAAGCAGTCTATAATGAAACATGTTCTAGACGTCCACGAAGACGGGCAATCGAATGTGCCTCTCGGCTGCGTACATTGCCGCACAAGTTTCAAAGACAAATCTCTGCTCAAAAAACACATTCGCGTCGGTGAATGCACGGTCTACATAAACTGTGATTTATGTTCAGAGCAATTTTCTAACATGCAAGACTTTAGCGATCATGCTCTTTTGGTTCACGCTGACCACTTTGAGAAAGCCGATAATCAGAACAAATGTGTCGACGGGCGCGCGACTGACTGTTCTCTCTGTGGAAAGAAGAATAGCAACTATCTGAATCTTGTTAAACATTTGAAAATGGTCCACAACGAAGACAGGCCACATTACTGTCAGAATTGCGATTCTAAATTTGAGTTTGCTGCTGACTTAAACAAGCATATTTATGCCGAGCATTCTGATCAAGCAATGGGTCTGACACAGCAGCCGGACATGTCTCTAGTGAAAGAAGAAGCGGAGGAGTATCACTATTCTTGCACAGAATGCAACGCCATATTTGAAACTGTGGACGCTTGGACGGACCACCAAGTGGCGGAACACAACCAGGTCGCCCACCACTGCGACCAATGTGACAAGAAGTTCCTACGACCATCAGAGCTAGCAGAACACAAAAATACTCACTTGAGAGTCAAATTTTATTCCTGCAGCATATGCCCGAATTCATATAGCACTCCTCAGAAATTAACGGACCACGTTTCACAAGCTCACCCAGTTGCAGAAACAGAATTCTTCTGCGACGTTTGCATCCGTTCGTTTAAAAGCCGCCAGGCTTACTCTAATCACATGCGTATCCACGCTAAAGTACCCACTACAAACAGAAAACCGGGCGAACCGAAAGGATTCGACCCGCGCATTATAGGGAAACCGGTCAAACAATTTACCATGGTTCAACCGGGTTTCGTTAACTTCAAACCAAATGTGTCCAACGTTCCTAATGCACCTTACTCGTGTGACATTTGCGGTAAAGGTTTTATGCACAAGAAAAACATCTGGAAGCACAAGAAGGTGTTGCATGCGGATATTATTAACGATAGAAACGATAGTGAGGAGAATACTATGCATGCTTCCACGGAGGATGACGATTACAACCCCGATGAGAACGGCGCCCTGTCGACTCCGCAGTTCAACAGCTTCAACTTCTCTAACTTTACGAACAGTACGCCTCAGCAACAACAGCAAGATACCATGCCGTATTCCTGTGAGCTGTGTTTCAAACGGTTTCCCATCAGGACTAGTCTTTGGAAGCACAAGAGAGCTAAACACGGTATCGTGAACCCTGGCGCCGGCGGCGGGAACGAAGGGACACCACAGCCGAAATCTGGAGACTCCGGCAGATCGAGCTGTACTATTTGCAAAATATCGTTCTCAGACAAGAAATCCTACTATCGTCACAGGAAGAACGTCCACAAAACTGCCACGGAAATGTGCAAACTGTGCGGGAAACCGTTGAATTCGACTCTCGAACTGTACGAACATTTGAAAGCTGCGCACGCTCGTGAGTTGCTCGGATACAACGCCAACCAAGGCTCTAGCAAAGCGCAGGAAGTGGTCCCAGAACCGGAAAACGACTATGAAAACGATACCGAAACTGCGGACCCCAGCTTGGACTACCAAGCGCGGTACCCGTGCGACACCTGCGGGAAACAGTTCGTCGGCTTACTGGCGCTGCAGAACCACCAGTGCATCAACCAGATGCCACCACAACCGCAGACCTTCGATTGCGAGATCTGTCACAAGAGTTATACGTCAATAGCCGCGTTGAAGAGTCACCGCGGTTGGCACCTGCGCTCCCCGGATGGGAAGGCGGCTGCCAACAACAGCGGGCTTTGGATGCCACAACACAAAGTGACGAGTAAGGTCAGCAAACACGAGGTCGTCGACGCGGTGCAGTTGGCCCGCGTCTCGCACTCGACCCCCGCCACGCATTCCGCGCCCGCTGCCGCCGTCACGGCCAAGCGGAGACTCCCGCCCGAGGTGGAAGTCACCGTCGTGAACCCCAACAAAAAACTACGATCCGATGACTCGGTTGAATTGGACCAACAAAACAACGAAGGCGCGGACGGCAGGTACTGCACGATCTGCGACAAGGAGTTCACGAAACGTGCAGCGTACCAACGCCACATGGACGAGGTCCACCAACCGAATTCCGTCTTCTGTCCCGTCTGCGATAGGAGTTTTACGAGGAAGTCGACGCTTCTCGTTCACATGAAAAAGCATTATGAAAGCGGGGAGGGGACTTCCGCGCAGATCGAGGAAGAAGGACATAATTGTGACGTTTGTGGGGACGGGTTTGAGAGTGAGAAAGGGTTGAGGGCGCATAAGGCAAGGCACCACGCGGAAGACTCTGAGGAGTCTGAAGATGACGGTAACGTTCCCATAGCGCCTCCAGGGGAGTTCACTTGCGGACAGTGCGGCGACGGCGTGGCTAGTCCGCGGGACCTACTCGCCCACCGCTCTATGCACGCAACCCCCACTAAATTCTTCTGCAATATCTGTAAAGTCTACTTCGCACGAGCTCTAGACCTCTCTTCGCACACTCGCGCCAGACACTCCGATAATGAAAAAGTGTTCTTCCCCTGTGCCATGTGTGACCGGTTCTACATGAACAAAAAGAGTTTGCAAAGGCACATCGAAATGGTACATTGA
Protein Sequence: MSVNYDRVCRLCLSSRGEILPIFPTTSSDDTEPPVLVTKIKDCVSVQITENDELPTNVCRKCMDNVNNWHIFKTVCEKTQNKLQSLIKKDGSLLEEVKIKSEPLYDEAYDDGVVIDGSYPVIENVASTSKLQPEGPPILASLGLTPRSDKGVESENNEEDYEEEMPEPEQEPQPEKGPEMPEVSITVTRNTGETLHARQGIHQLASKDCLICGRTYRYSHNARRHELASHSFDRYTNKVTNKKSHHSRMMPKLRPNPFNPKARLMPNPISHKLQFMPKNIPAKIIPQKVILPPKPIPVKTTKTQNNLPYPLRIKALKDLQIRKKEPQILKTLLTAKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPNDYDQNQEDDGEIDGDNGMEQTQNYDTVEMESDHEIEIARQQANDIGVLDKDSFVENNDENIQEEDQDNHVNETEKHGESENEGDQDTVDSQGNMEIDESYSNSNIVDMQKDKDDPDDIDNDEQEVNPDADDNDDEEDMPPPPVVELTEEMQHSSSEMNEEEEEMDESADLNETAEDKETALDPDKTYVTKTQKEFIEKYRDVIQQINTKRCLCCDKTYPRRKAVVQHLQKNGHKVPKHTCYNCVITFTHIGALLSHMRANACTDLWKIVFDKNGIPDDMVIKYEPQAKIQPKDIFNARSYACRLCPAKFQLKQSIMKHVLDVHEDGQSNVPLGCVHCRTSFKDKSLLKKHIRVGECTVYINCDLCSEQFSNMQDFSDHALLVHADHFEKADNQNKCVDGRATDCSLCGKKNSNYLNLVKHLKMVHNEDRPHYCQNCDSKFEFAADLNKHIYAEHSDQAMGLTQQPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYSCSICPNSYSTPQKLTDHVSQAHPVAETEFFCDVCIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPVKQFTMVQPGFVNFKPNVSNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEDDDYNPDENGALSTPQFNSFNFSNFTNSTPQQQQQDTMPYSCELCFKRFPIRTSLWKHKRAKHGIVNPGAGGGNEGTPQPKSGDSGRSSCTICKISFSDKKSYYRHRKNVHKTATEMCKLCGKPLNSTLELYEHLKAAHARELLGYNANQGSSKAQEVVPEPENDYENDTETADPSLDYQARYPCDTCGKQFVGLLALQNHQCINQMPPQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDAVQLARVSHSTPATHSAPAAAVTAKRRLPPEVEVTVVNPNKKLRSDDSVELDQQNNEGADGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLLVHMKKHYESGEGTSAQIEEEGHNCDVCGDGFESEKGLRAHKARHHAEDSEESEDDGNVPIAPPGEFTCGQCGDGVASPRDLLAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143236; iTF_00634713;
90% Identity: iTF_00634713;
80% Identity: -