Egri010884.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- clz9
- Assembly
- GCA_017562165.1
- Location
- chr18:4151038-4154343[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-10 1.9e-07 30.7 0.0 2 40 33 72 32 75 0.92 2 2 8.1 2.5e+03 -1.7 0.0 21 30 378 387 377 387 0.88
Sequence Information
- Coding Sequence
- ATGATGAtatattttaatacctatttcttgttatttttttacagaaacaTGGTGCGGACATATGTACCAAAAAACACAACTAGACCAGTTGTGAATGAAGAATCTATGCAGTCAGCAATACAGGATGTTGTGCAAGGAGTATTGTCATACAGAAAAGCTGCGGACAAGTACAATTTGAAATTGTCAACATTAGAAAgccgagtaaaaaaatacaagaatagCAATGATGCTGAAGGGTCAAGCAACCGTACATTTGACTCTAAATATACAAGTTTCCAAGTCTTTTCTATTGAAGAAGAAAAGCTGCTAAATGattatattatcaaatgttGTAAGATGCATTATGGACTTACGACGATTCAAACAAGAAAGCTAGCATATGAGTACGCCAAAGCTTTGAGTTTGAAATATCCAGCAAAGTGGGAAGAAACTAAGATGGCTGGGAAAGAGTGGATGTATGGTTTTCGCAGAAGAAACCCGGAACTTAGTTTACGCAAACCCGAAAACACTAGTGCAGCTAGGTCTTTTGCGTTTAACAAAACTTCGGTTACCGAGTTTTATACCAACTTGAAGACAGTGTTGGAGCGACATCCATTAACTGCTGACAGAATCTTTAATTTCGACGAATCAGGTGTTTCTACCGTTCTAGCTACTCCCAAAGTCTTGGCTCCAAGATGTCAAAAACAAGTCGGGCAAATTGTATCAGCTGAAAGAGGCGAGCTCGTAACTTTTCGTGGTATTATATCTGCCAGTGGAAATACCATTCCTCCACTATTTGTGTTCCCACGCGTTCATTATAAAGACAATTTCCTCGAAGGAGCACCCGAAGGAAGTCTCGGCGCTGCAAATAAAAGTGGCTGGATAAATAGCGATATATTCGTGTCTGTTTTAAAACATATCCAGAAGCATACACTCTGCACTAATGAAAACCCCATATTATTGCTGTGTGACAATCATGAAAGCCATGTTTCTCTCGAAGCCATCAACTACGCCAAAGAAAATGGTATAATTTACCTATCTTTTCCACCGCACACATCTCACCGTCTACAACCACTTGATGTAGGAATCTTTGGACCATTTAAATCAAAGTTGAAAATTGCTTTCAATAATTGGCATACAATGAACCCAGGCAAAGCAATGACTATTTACAATATTCCAAAGCTTGTGAAAATTGCGTATTTAGAATCATTTACGGCAAAAAATATCACAAGCGGGTTTAACAAACCCGGGATATGGCCTCTTAACGAATTAGCCTTCAGTGACGAAGATTTTGCTCCAACTGAGGTTTATACATCCGGTAACGTAGAAAATGTTCCTCCTACTCAAAACATCGTTGAAGATTTGTCAGCACCTACTCCTGAGCCAGTTTTCTCTGATATCTGCCAGCCTTCTACTTCAGGAACACAAGATTTCTTGGAGGTTCCGTCAGAATCTACAGAACAAACTATTAACTCTCCATTGATAACTCATGATAATGAACTACACACGTTTAATTTAGATGCTTGTGAACCAGATGCTTTGAATAATTCACCAATCCATCAAATAGTAGCTCCTTTGAAGACTGTTTTGACACCAGAGGCAATTCGACCATATCCGACTGTTGTAAGaagtaataaaacaaacaaagggCGACGGCCAGGAAAATCTCGTATTTATACTGACACACCCGAAAAAAAGCTAATTGAAGAGAAACACAATCAAAAGCAACTGAAAAAGCTAGAACAGGAAAGAAGGTGTAGGGCTAGACAAATGAAACGTAGTTTGgttgactttaatttaaaaacgaagAACAAGAAAGCTAAAAACACAGAAAGTGATGAATCTGATTGCGATGGATCTGATATAAGCTTTCAAGAGAGTTCAGTTTCTATCATAGATGAAGATGAAAGCGAGCatgaaaattttgaaatgaaCAGAAGCCAATTGAGAGTTGATGTAATACCAGACAATATTAAAGACGGTTCGTTTGTTTTAGTGAGATTTCCTAAGAAAAAAAGTGTTATTTACTATGTAGGAAAAGTTGTTAGTCACTATAGTAAGACtgaatttaaaatatcttaTCTAAGAAAGAAGCCAGGATATTCGTGGACATTTGTTTTCCCTGATGTTGAAGATATTCACACTATTTATATTACTGATGTTGAAATGATTCTTCCTGAACCTAAGCCTCCAACATTTTGTACTTCTAGAACATCAAAACTTTTCACTTTTGCagtaaattttactaattttaatgttcaataa
- Protein Sequence
- MMIYFNTYFLLFFYRNMVRTYVPKNTTRPVVNEESMQSAIQDVVQGVLSYRKAADKYNLKLSTLESRVKKYKNSNDAEGSSNRTFDSKYTSFQVFSIEEEKLLNDYIIKCCKMHYGLTTIQTRKLAYEYAKALSLKYPAKWEETKMAGKEWMYGFRRRNPELSLRKPENTSAARSFAFNKTSVTEFYTNLKTVLERHPLTADRIFNFDESGVSTVLATPKVLAPRCQKQVGQIVSAERGELVTFRGIISASGNTIPPLFVFPRVHYKDNFLEGAPEGSLGAANKSGWINSDIFVSVLKHIQKHTLCTNENPILLLCDNHESHVSLEAINYAKENGIIYLSFPPHTSHRLQPLDVGIFGPFKSKLKIAFNNWHTMNPGKAMTIYNIPKLVKIAYLESFTAKNITSGFNKPGIWPLNELAFSDEDFAPTEVYTSGNVENVPPTQNIVEDLSAPTPEPVFSDICQPSTSGTQDFLEVPSESTEQTINSPLITHDNELHTFNLDACEPDALNNSPIHQIVAPLKTVLTPEAIRPYPTVVRSNKTNKGRRPGKSRIYTDTPEKKLIEEKHNQKQLKKLEQERRCRARQMKRSLVDFNLKTKNKKAKNTESDESDCDGSDISFQESSVSIIDEDESEHENFEMNRSQLRVDVIPDNIKDGSFVLVRFPKKKSVIYYVGKVVSHYSKTEFKISYLRKKPGYSWTFVFPDVEDIHTIYITDVEMILPEPKPPTFCTSRTSKLFTFAVNFTNFNVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01034477;
- 90% Identity
- iTF_00635333;
- 80% Identity
- -