Ecre042081.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- -
- Assembly
- GCA_963693475.1
- Location
- OY856364.1:974784-997961[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.52 1.4e+04 -2.2 0.0 27 48 2 23 1 27 0.84 2 10 0.00017 4.5 9.0 0.1 23 48 27 52 20 55 0.89 3 10 0.0019 50 5.6 0.0 25 49 87 111 84 114 0.90 4 10 0.00018 4.8 8.9 0.0 23 48 238 263 235 266 0.89 5 10 0.00026 6.9 8.4 0.1 25 52 298 325 295 326 0.94 6 10 0.77 2e+04 -2.7 0.1 26 48 338 360 335 362 0.85 7 10 0.77 2e+04 -2.7 0.0 27 46 371 390 369 393 0.79 8 10 0.0012 33 6.2 0.3 21 48 393 420 386 425 0.89 9 10 0.61 1.6e+04 -2.4 0.0 25 44 427 446 422 450 0.78 10 10 0.35 9.3e+03 -1.6 0.0 17 48 476 506 457 508 0.68
Sequence Information
- Coding Sequence
- ATGTGCAAAGTTTGCTCGAAAACGTTCAAAGGACCGTACAATTTGAAAATTCACATGAGGTACGTGCATCCAGCCGGTGACCCCCACCCCTGTCCCTTCTGCTACAAGACCTTCAAAGTGGAGATGCTTCTCCAACGGCACCTGAAGTGGGCGCACCCCGGCGACGGCATGACCTACAAGTGCCAAGAGTGCCACAAAATCCTCCCCTCTCTCGACGGCTTCAAAACCCACATGAAGAACGTTCACCTCTTCGACCGAGCCACCTGCGACCTCTGCAAACGGAGCTTCAAAACAAAGAAATCTCTCGAACGACATCTCAAAAACATCCACAACGCGTTCTCGCGTCATCATTCACTCAGTGacgtagttcggagagccttggTGTCTGCAGGCGTTCTCTGCGCGCTTGAGCCCACGGTGCTGTgtagatcggacggcaagagactgGACGGGCCGATCCTAGTGCCTTGGAAGAACGGAAAGTGCGTCAGCACTGTTGCTGCCAGTCACTTGGGTCCCACTGTTCACTCGGCGTCAGCGGCTGCGGAGGATGCGGCTAAAAGAAAGAAGGTGAAATACAGCGTGCTAGTGTCGATGTACGAGTTTGTACCGGTCGCCGTGGAGACCCTGGGTTGTTGGGGGGCGGAGACTAAGGGGTTCTTGTGGAGGACGCAGGCTCCGGGAGACTACTGGTACGTGCACCCGGCCGGTGACCCCCACCCCTGTCCCTTCTGCTACAAGACCTTCAAAGTGGAGATGCTTCTCCAACGGCACCTGAAGTGGGCGCACCCCGGCGACGGCATGACCTACAAGTGCCAAGAGTGCCACAAAATCCTCCCCTCTCTCGACGGGTTCAAAACCCACATGAAGAACGTTCACCTCTTCGACCGAGCCACCTGCGACCTCTGCAAACGGACCTTCAAAACAAAGAAATCTCTCGAACGACATCTCAAAAACATTCACAACGGAAAACCCCCTGAAAAGATAGAAGAGTACGTACCAAAAGAACATACATGCCAGTACTGCGAGCGATCCTTCAATAACAGTACTTCTCTATTCTGGCACATAGAACGGTTTCACGCTCAATTACAAAAGTTACCGAatgatttatgtattatatGCAACAAAGAATTTTCGGACTATGCTGCTTTGCATCGACATCTAACATCAGTGCATTCGCTAGAAACGGCGACCTGTAAAATATGTCAAAAGGAATTCAAATCTCCGATAAATCTGCAAAATCATATTAGAATCACGCACGCCCCACCAGAAGCTACCCAAAAATGTGACATATGTCAAAAAACGTTTAAATGTCCTCTGCATTTGCGGATGCACGTTTTGGCAGTTCACGATGGCGGGGAGTATCCGTGTGACATCTGTCAAAAAACATTCACGTCAACGAAATATTTGAATAAGCACAAGAAATCGCATTCGGACTCTAGAGACTTCCAATGCGATGtctgtttaaaaatgtataaaaatataaacgctgtaaacaaacacaaaaagTTAGTACACAACGGAGTGAAATGTACTATATGTAATATAAAACAACCGAACATAGAAGACCATATGAGGAAGTGTCATCCTGACATTGCTATAAATTTAACTATAGACACAGCCAAGCCCAGTAAACATGAATCAGTCAAACGGAAAAGAAGAACAGCGGATCCGGCTAAACGTAAAAAGAAGACGGACGATGCAAAAAACACTGAGTCAGAGTATAATAATTCAAATATGCAATCTATAGCAAACATTAATACATCTATGCATTCTGAAGAAAATATTAATGCATTTATGCACTTTGCAGAAAATAGGAATGTGTTTATGCACTTTGCGGACAATATGAATGCTATGCATTCTAGTGAAGATAATAACATTGTTGATAATACAGATAATAGTGATGAAATGGAGtctaaattaaatgaattaagTGTTGTTAAAAGTGAAATACAGATAGATGAAATAGTGTGTAGGgtttgtgaaaagaaaattgataGTTCAGAATACGATGAGCATGCGGCGAGTTGTGAGCGACCGCCGATACTGGAGGTTACTATCAAAATGGAAGTTGATGACGATTGA
- Protein Sequence
- MCKVCSKTFKGPYNLKIHMRYVHPAGDPHPCPFCYKTFKVEMLLQRHLKWAHPGDGMTYKCQECHKILPSLDGFKTHMKNVHLFDRATCDLCKRSFKTKKSLERHLKNIHNAFSRHHSLSDVVRRALVSAGVLCALEPTVLCRSDGKRLDGPILVPWKNGKCVSTVAASHLGPTVHSASAAAEDAAKRKKVKYSVLVSMYEFVPVAVETLGCWGAETKGFLWRTQAPGDYWYVHPAGDPHPCPFCYKTFKVEMLLQRHLKWAHPGDGMTYKCQECHKILPSLDGFKTHMKNVHLFDRATCDLCKRTFKTKKSLERHLKNIHNGKPPEKIEEYVPKEHTCQYCERSFNNSTSLFWHIERFHAQLQKLPNDLCIICNKEFSDYAALHRHLTSVHSLETATCKICQKEFKSPINLQNHIRITHAPPEATQKCDICQKTFKCPLHLRMHVLAVHDGGEYPCDICQKTFTSTKYLNKHKKSHSDSRDFQCDVCLKMYKNINAVNKHKKLVHNGVKCTICNIKQPNIEDHMRKCHPDIAINLTIDTAKPSKHESVKRKRRTADPAKRKKKTDDAKNTESEYNNSNMQSIANINTSMHSEENINAFMHFAENRNVFMHFADNMNAMHSSEDNNIVDNTDNSDEMESKLNELSVVKSEIQIDEIVCRVCEKKIDSSEYDEHAASCERPPILEVTIKMEVDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634723;
- 90% Identity
- iTF_00634723;
- 80% Identity
- iTF_00634723;