Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856351.1:26626277-26641352[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00096 0.14 14.2 2.4 1 23 357 380 357 380 0.92

2 10 0.0037 0.52 12.4 5.8 1 19 391 409 391 413 0.92

3 10 0.0016 0.23 13.5 4.3 2 23 419 440 419 440 0.97

4 10 0.00016 0.023 16.6 1.6 1 23 444 466 444 466 0.98

5 10 0.00044 0.062 15.3 0.7 2 23 623 644 622 644 0.95

6 10 0.13 19 7.5 0.3 3 23 665 686 663 686 0.93

7 10 1.1e-06 0.00016 23.4 4.1 1 23 692 714 692 714 0.99

8 10 0.0015 0.21 13.6 1.5 1 23 719 741 719 741 0.98

9 10 6.8e-05 0.0096 17.8 2.8 2 23 748 770 747 770 0.97

10 10 0.034 4.9 9.3 2.6 1 19 808 826 808 831 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00096	0.14	14.2	2.4	1	23	357	380	357	380	0.92
2	10	0.0037	0.52	12.4	5.8	1	19	391	409	391	413	0.92
3	10	0.0016	0.23	13.5	4.3	2	23	419	440	419	440	0.97
4	10	0.00016	0.023	16.6	1.6	1	23	444	466	444	466	0.98
5	10	0.00044	0.062	15.3	0.7	2	23	623	644	622	644	0.95
6	10	0.13	19	7.5	0.3	3	23	665	686	663	686	0.93
7	10	1.1e-06	0.00016	23.4	4.1	1	23	692	714	692	714	0.99
8	10	0.0015	0.21	13.6	1.5	1	23	719	741	719	741	0.98
9	10	6.8e-05	0.0096	17.8	2.8	2	23	748	770	747	770	0.97
10	10	0.034	4.9	9.3	2.6	1	19	808	826	808	831	0.95

Sequence Information

Coding Sequence: ATGGAGGAGGAAAATGCCTTGGCAGACTTGCAACAAGACTTTCCGGTCTTATTTATCCCAAAGCAGTGCACAAAACTGGAAATGAGCTGTGAAATGTCCGATAACGTGTTCATTGCGCTGTCTATTAATTCCCCAGACATAGAAGGCAacgaaatatgtatttatactgGTTTTTGTAACGTGAAATTAGTAGAATCCTGTAATATCAGTGTCAGTGACTCGGATCAAGTCGAAACTGAATTGGAGGACTCAAATTCGTCAATTGACTGTGATATAAATAAGATGCCAGTAATCTTGTCTGACGCTAATATTTGGCCAAATCAGCCGGAAAATGTGTGGATAGATCCTTCAAGAAGTCCATATGTGTATAACCATTATGATACTGCACAACAGCCTTGCTCGATTCTGGGAGGATTCAAGCAGCCTTACTCCATCCTCGATGCAGGTTGCAAACAACCCTACTCTGTCCTAGATGAAGGTTGTAAACAGTCTTACTCTGTCCTTGACGGAGGTTGTAAACAGCCGTTCTCTGTCCTTGACGGAGGTTGTAAACAACCCTACACTGTCCTTGAAGGAGGTTGCAAACAACCTTCCTCTGCCCCTGAAGGAGGTGGCATCACTATCCAGCAACATAACACTTACATTACCCAGAATGTTTACAACTATGAAAATCAGATGCAGAAAAATGAGCTGGACTTCAATGATTGTGAGAATGTGAAAAGTCTAAGAGATTTGACAGACTCTTCCTATGAGGATGATAACTCGGAGAGTGACATGTTTCTCTCCGAACTATCAAAGGCAAATAAGAAGATAGATAAAACAGAGGAGACTAGTAAAGTAAGCAGTAACGTAGAAGACAACGATGCACTGAAACAGTTAATGTCATCTACCATCCAGTCCACCTCGAAGCAGCGGAAGACCATAATGTTCCTGGGCGAGGACTCGTCCACGGGCCAGACCATCCAGAACATTCACTACACAGACCCGGCGGTCAAGTGCTCGGCTTTAGCTGCAGACCACGACATTGTCATTGATGAGATCCAAGCCCCCACTCCTCATAAAAAGAAGTACCAATGCGACAAATGCAAGCAAATCTTCCACCAGCTCTCAGAGTTCCGCCAACACATGGTCGGGAACCACACCAACTACAAGGTCCTCAAAGACAAAGGCTTCTCCTGTCCCGAATGCGGCAAGCACTTCTCTAACAACTTCAAGTACCGAAACCATTGCCTAGGACACGGAGACCCAGAGAGAGAATGTCGTAAGTGCTTCAAAATATTCTCCTCAAAACACACCCTAAAGAACCACGCAAAAATCCATGAACGCAAGTTCCCATGTCAGTATTGCTCCAAGTCTTATGCTATGGCCGAAACTTATAAAAGACACTTGAAAAAACATTTCAACTTTGTGTGTGACAAAGAGGGGTGTTTCTTTATAACAGATTCAGATGCAAAAAGGGACGACCACGAGTATGATCACATTGATTTCTGTGTTGATCAAATCAATCAGGGTCTCAAACAGTCGGAGGTAGAAGGATCGTTCATGGATGATCTCGGTGAAGATTTTGAACATGATCTGATAACTACAGAGGACGACTTGAAAATGGAATTCACTGAATTCGAAAAACATGACAAAGGCGATTTAGAGAAGAATGAACACTCGGAGATGGACATAACTGAAGATATGGTAGAAAGTAACATTAAAAACAAGAACTTTGAAGATGATAAAGTGAAAGAAAGAGATATGATTCAAATGGAGCAAGATGAGAGAGTGAAAATGGCTGACTCGGTCATAGCTAAAGTCATGTCCAATAAAGTATTTCTGTTGAACTCCAAGACAGCGAAGAAACAAGTACGGGGACATAAGACTTGCCAAGCCTGTTCGAAGTCGTTCGACAGGATATCAGACCTGAAGCGTCACCTGATAGAGCACATCGTGAAGTCCACACTGGCCAAGTCTGTGCACAGTCGACAGGGAATACTCAAACTAAACTGTGAGATATGTCAAACAGCATCGTTCAACTCTCTCGACAAGTACAAAGCCCATCTTCGCGAGCACGCGAAACTCACCCTCTACAAATGCACCTTCTGCGACAAATCCTTCAGCGATTCCAGCAACTTCTCCAAACACAAGAAAGTACACGGCATCTCCTACTACCAGTGCGACTTGTGCCACAGGAAATTCAACTCTAAACTAATGATCGCAAAGCACATCGAGGTTCACGCCAAGAATAAACCAGTGGAATGTAAGATATGCAGACGCGTGTTTCACTTCAAGTCCATGCTGAACAAGCATATCAAGACTTTGCACACGAAACCGGTAAGTGTGAAATTCCCTTGCAGGTTTTGCACGGATTCTTTTAAGAGTTTGAAAGAAAAGTGGGACCACGAATGGGTTGTTCATAATATTAGGAAGATGGTGTATGACTGTCTGGTCTGCGACGCTAAGTTCAGAAAGTTTTCTGAGCTAAAAAGGCATTGTTCCGATGAACATGCTGTCGAAATTCCGACGCAGAAGAAATTGCTGCAAAAGTCCGTTTGA
Protein Sequence: MEEENALADLQQDFPVLFIPKQCTKLEMSCEMSDNVFIALSINSPDIEGNEICIYTGFCNVKLVESCNISVSDSDQVETELEDSNSSIDCDINKMPVILSDANIWPNQPENVWIDPSRSPYVYNHYDTAQQPCSILGGFKQPYSILDAGCKQPYSVLDEGCKQSYSVLDGGCKQPFSVLDGGCKQPYTVLEGGCKQPSSAPEGGGITIQQHNTYITQNVYNYENQMQKNELDFNDCENVKSLRDLTDSSYEDDNSESDMFLSELSKANKKIDKTEETSKVSSNVEDNDALKQLMSSTIQSTSKQRKTIMFLGEDSSTGQTIQNIHYTDPAVKCSALAADHDIVIDEIQAPTPHKKKYQCDKCKQIFHQLSEFRQHMVGNHTNYKVLKDKGFSCPECGKHFSNNFKYRNHCLGHGDPERECRKCFKIFSSKHTLKNHAKIHERKFPCQYCSKSYAMAETYKRHLKKHFNFVCDKEGCFFITDSDAKRDDHEYDHIDFCVDQINQGLKQSEVEGSFMDDLGEDFEHDLITTEDDLKMEFTEFEKHDKGDLEKNEHSEMDITEDMVESNIKNKNFEDDKVKERDMIQMEQDERVKMADSVIAKVMSNKVFLLNSKTAKKQVRGHKTCQACSKSFDRISDLKRHLIEHIVKSTLAKSVHSRQGILKLNCEICQTASFNSLDKYKAHLREHAKLTLYKCTFCDKSFSDSSNFSKHKKVHGISYYQCDLCHRKFNSKLMIAKHIEVHAKNKPVECKICRRVFHFKSMLNKHIKTLHTKPVSVKFPCRFCTDSFKSLKEKWDHEWVVHNIRKMVYDCLVCDAKFRKFSELKRHCSDEHAVEIPTQKKLLQKSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00635700;
90% Identity: iTF_00635700;
80% Identity: -