Ecre017774.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- -
- Assembly
- GCA_963693475.1
- Location
- OY856347.1:22036613-22040668[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.01 1.5 10.9 0.6 1 23 262 285 262 285 0.96 2 17 0.018 2.6 10.2 2.2 1 23 290 313 290 313 0.92 3 17 0.1 14 7.8 2.5 2 23 317 338 316 338 0.96 4 17 0.004 0.57 12.2 0.9 3 23 345 366 344 366 0.96 5 17 0.057 8 8.6 1.0 3 23 432 453 430 453 0.92 6 17 0.00091 0.13 14.3 3.9 1 23 459 482 459 482 0.96 7 17 0.00061 0.086 14.8 0.6 2 20 486 504 485 506 0.94 8 17 0.013 1.9 10.6 0.1 2 23 515 537 514 537 0.93 9 17 6.8e-05 0.0096 17.8 2.0 1 23 542 565 542 565 0.96 10 17 0.049 6.9 8.8 0.1 2 23 578 599 577 599 0.93 11 17 0.0001 0.014 17.3 1.3 1 23 605 627 605 627 0.98 12 17 0.26 37 6.5 0.2 2 20 633 650 632 652 0.79 13 17 7.8e-06 0.0011 20.8 0.5 1 23 662 684 662 684 0.97 14 17 0.01 1.5 10.9 0.4 1 23 721 744 721 744 0.97 15 17 0.0027 0.38 12.8 1.1 1 23 750 772 750 772 0.98 16 17 0.0033 0.46 12.5 7.7 2 23 779 800 778 800 0.96 17 17 0.062 8.7 8.5 6.0 1 23 806 829 806 829 0.96
Sequence Information
- Coding Sequence
- ATGCAAATTTGTCCCTATTATGGGAATCTTCCCGAATCACAAGAGCTAGGCATATTAGGTATGGATGATACAGGCACTTCAATTGAGCAATCGAATCGGGAATGGTTGAGAGATAAACTCTCCACCTTGTGGACAGCTCCACAGCACTGTGGATTGTGTTTGGAAACCACAGGAGACTTATACCCATTGAATACAGAGTTTCTTCTCGGCAAATGGTTTTACACCAAGTCACTGAAGGACATCATAAACGCTGTTTTGGTGTGTGATGTTCAAGACTATGCAAGCTGTGAAATGATATGTAAGCAGTGTGTAGATAATGCAATACaaagttatgtatttactgaaaACACTAAAAGAATATTTAATCTCTTAAAAGGTTGTGTAAATGACTTACTTTCAAAAGTCACAGACCTTAACAATGAGTTAGAAGGATCACAAActgaaaactatacaaattctAATGTAATGATTGTTGTTGAATATGATAATGAAGTAACAGATAAAGTTGATAAAGCACCCCAGCTGGATAATAATAGATGTGTGAAAAACATTGCAGAaaaagaattaaataaaaaaaaattagatggCAAAGTTACTCCACAACACAATGAAGGTAAGCCTATACCAATCCAACGAGTTGTTAAGTATCCGAGAACTAAAGAAATTGTAAAAGAGGATAAGCCAGTACCAAAAGATGACACTCCCACATTTACACTTGAAGGAGGGAAAATAGTGATTGCACCTCTGACCATTAATAGTCCTTCCACACCGAAATACAACACATATGCATGTAATTCATGCCCCAGTATCTTCACAACATATAGATCTTTGAAGGAGCATGAAAAATCCCTACACAACACCATAATATACCAATGCAGGTTTTGCAGCAAAACATACAACTCTCAACAGTACTTAGATGTACATTATGTGAATAATCATTCAAAAAAGAGATGCAGATATTGCCACGAATTATTTGATTCTAAAGAATTGAATGACCATCTGAGAAATGTACATAAAGAACAAGTGAACTTCTGCCAATATTGTGATCTGGTTTATCACACACCAGAACAACTGGAGACTCATTTCAAATCTGCTCATTTAGTGAGTCAAGCCCAAACCAATGATAATAACAAAACTCAGTGTGTCATGTGCCTTAGAAATTTTAATGATTCAGAAATTAAAATGCACAAATGCAAGTTTTCTTGTCTGGAATGTCTTTCAGCCCCATGTGTACATTACAGCTACCTAATGTCCTACAGGGAACAGATATTAAACCATATTACCAAAATTAGATGTATAGACTGTGACTTCACTACAAAGCGAAAGGAACATTTGATAGGTCACGTCAACCGGGAGCATTTAGATCACCATCCTTTCACATGCCACGACTGCGGAACACAATTTTACACAAAGTTGAGCATGAAAACTCATATTATGCAGTTTCACCAAGACTTGAAATGCCAGTACTGCGACTATGAATTTAAGAATTTAAAGTTACTGCAGAATCACAGAGACCTCTGTAAAGGTATAACAAGATCTGTACCCTGTGAACTTTGTGTGGCATCATTTGATACAGATTCAgaactaaaaaaacatttgagtctTAACCATAGTGATATTGTATACCCATGTACATTATGCAAGAAGGAATTTACAAATGAATCTACACTTAAAGATCATCACATCAAAATACATAGTGGAATTCAGTACAAGAAGCGAAGAAAATTCATTGAGTGCACTCTTTGTGATATAACTTTTGATAATATCAAAGAAATgctgaaacatgaagagttacATGACACAAACGTGATGTACCCTTGCAAAGTCTGCCCAAAAAGTTTTTCTAGTTTGAGACAAATGTATGTCCATAAGCAAAAACACTATAGCCAAAGGACTAAATGCCACAATTGTGGCAAATCTGTTGGGACAGCATACTTAAGTCAACACATGGTAGTTTGTGCTAGTTTCAAAACTAACAGGCCGTTTTCGTGTGATAAATGTGGTAAAGAATTCAGTGTAGAATCAGCGCTAATGACCCACCTCAGATTCCATGAAAAGCCTTATGTCCCATGTGAGTACTGTGAAAAACTAATAAAAGTAACATCAATGAAACATCATATCGAAACAAAACATACCATTGGGTCAGAAAGTAAGGCTACTTTCGAATGTGACCTTTGTAATTACATTGCCAGGAAGAGGGTTGATTATGAAAACCACATGAATAAGTTGCATTTAAAGATAAAGCCATTTGTTTGTCAAGTATGCAGTAAAGCATTTTGTGGAAAAGCTAGATTGGATGAGCATGTAAAGACGCATTCAGACAATAATGTCTGCTTTTGCTCATTCTGTGGCAAAAAGTTTGCTAACAAAGTTTGTCTTAAAATGCATACAAGAAAACACACTGGTGAAAAGCCCTATGAATGCAACATTTGTCATGAAAAGTTCTGCTCATCTAGTATAATGAAAACACATAGACTTAAAAAACATCAGGATAAAACAATACAGTGTCCGTTGTGTGATTCAATGTATCATTTGGTGGCTGAGATGCGGTTCCATGTCAAAAAAATACACTGGAAGAGCCCAGACCCATTTGATTTTAAACAGATTGTGTCTGAGGAGTTCCATCATTTGTTTGAAGATAGAAGACTACAAAAATTAGGTGAAGGTGCTTAG
- Protein Sequence
- MQICPYYGNLPESQELGILGMDDTGTSIEQSNREWLRDKLSTLWTAPQHCGLCLETTGDLYPLNTEFLLGKWFYTKSLKDIINAVLVCDVQDYASCEMICKQCVDNAIQSYVFTENTKRIFNLLKGCVNDLLSKVTDLNNELEGSQTENYTNSNVMIVVEYDNEVTDKVDKAPQLDNNRCVKNIAEKELNKKKLDGKVTPQHNEGKPIPIQRVVKYPRTKEIVKEDKPVPKDDTPTFTLEGGKIVIAPLTINSPSTPKYNTYACNSCPSIFTTYRSLKEHEKSLHNTIIYQCRFCSKTYNSQQYLDVHYVNNHSKKRCRYCHELFDSKELNDHLRNVHKEQVNFCQYCDLVYHTPEQLETHFKSAHLVSQAQTNDNNKTQCVMCLRNFNDSEIKMHKCKFSCLECLSAPCVHYSYLMSYREQILNHITKIRCIDCDFTTKRKEHLIGHVNREHLDHHPFTCHDCGTQFYTKLSMKTHIMQFHQDLKCQYCDYEFKNLKLLQNHRDLCKGITRSVPCELCVASFDTDSELKKHLSLNHSDIVYPCTLCKKEFTNESTLKDHHIKIHSGIQYKKRRKFIECTLCDITFDNIKEMLKHEELHDTNVMYPCKVCPKSFSSLRQMYVHKQKHYSQRTKCHNCGKSVGTAYLSQHMVVCASFKTNRPFSCDKCGKEFSVESALMTHLRFHEKPYVPCEYCEKLIKVTSMKHHIETKHTIGSESKATFECDLCNYIARKRVDYENHMNKLHLKIKPFVCQVCSKAFCGKARLDEHVKTHSDNNVCFCSFCGKKFANKVCLKMHTRKHTGEKPYECNICHEKFCSSSIMKTHRLKKHQDKTIQCPLCDSMYHLVAEMRFHVKKIHWKSPDPFDFKQIVSEEFHHLFEDRRLQKLGEGA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00635660;
- 90% Identity
- iTF_00635660;
- 80% Identity
- -