Ecre034909.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- clz9
- Assembly
- GCA_963693475.1
- Location
- OY856358.1:21284402-21287044[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-07 0.00023 22.3 0.0 2 35 23 55 22 63 0.89
Sequence Information
- Coding Sequence
- ATGCCTCCATCGAAACCAAATACTAAAAAGATCGAtgtcgtgaaaagaaaattgttcCAGTACTCACCGCATAAAATAACATTAGCGTTGAACGCAATAAAGAATGGGATGCCCGTTGCCACTGCTAGTAGAGATTTTAACGTACCTCGAACGACTTTGCGTCACAAAATTTCTGGGAAAGCGCCTGAAACTTCTGGACATGTAGGGCCCCAGTCAGTTCTTGGAAGACAAATAGAAAACGAACTTGTCATATGGATCAAAGATTGCGCTCGCGCTGGATTTCCTATCAACAAGGAAGGATTACTGGATTCTGTTAAGAAAATTGTTGTGAAGGGCCAAATTGCTACACCTTTTATAAATGATAGACCTTCAAGATCCTGGTTCGATGGATTTATGGCGAGACATCCTGATTTGAGCCAAAAACATGCCGAGTATATTAATAAAGCTCGTGCCCTAATAACTGAAGAGAAAATTCGAAACTGGTTCCAAGAAATTTCTTCATTGCTCGGTGAAGAAAATTTAAAGATTCTAGAAAACCCTGCGAGAGTGTGGAACTGTGATGAAACATCTTTTTTTCTAGCTCCAAAAGGATCTCTTGTGTTAGCTGAAAAGGGACAACATGTTTACGATACATCAAAAAACAGCGATAAAGAAAATATAACTACCCTATTTACTGTCAATGCCGCTGGTGAATATGCACCTCctttaactatttataaatacaaaagaatGAGTTCTGAAGTTCTTGACAATGCACCAAATGGATGGGGAGTTGGTAAAACCGATAAAGGATGGATGACGGGCGAATCTTTCTATGAATATGTGGCAAACGTCTTCATTCCTTACCTGAAAGAAAAAGAACTTACATTACCAATAATTTTGTTTCTTGACGGCCACAAGTCCCATCTGACTATGCATCTTAGCGAATTGTGTAGGGAAAATGGCATTATAGTTATTGCTCTTGTCCCAAATACAACGCATATGTTGCAACCTTTGGACGTTGCTGTATTTTACCCATTGAAACAGAATTGGCGTCAGATGGTCAAAAAGTGGCGCATTGAAAACGATGGACAAGAAATCACAAaatttactttgccatctgctcTGCAAAGTTTACTCCTTGATAACAGAGATAAGTTTGCAAAAAATGTGCAAGCAGGATTTCAGACATGTGGTTTATTTCCATTTGGTGCTGACTTTGTTAATTACAAGAGAATTATAAAAGATAGAGACCCAAAAACTTTTGAAAACCGACACGAAGTTGCTATTTCTGAATCCAGCTACATTTCATACCTGGAAAGTAAAATCGTCCCACACATACTGAAAGACTTttatactacatttaattctgGTAAAGACTGGGAAGGCAACAAAGAGGCATCAATGTTATATGATATATGGCTAGCTTTCAAAAATGATACTACTGCTACAATGTCACAGCCCACCTTGGCATCTCATGATATTGAAAATGCCGTCAGAGAAACTCCTTCACCATCGCTTATCAAGGAAGATAATATATCAAGGAACCAAGAGTACATTGATGACTTAACTGACATTGAAAACGAAGATAGCTCCTCCAGTACTTCTCTTGCAGCAAAAGAGCCATCAGAAGGGCCAGGTCCATCTTCCGTCTATCCTGCTATCGACATTCAAGACTCGGAAAATATGAACAACTCTCACAAAACTTCGGCTGCGGAAAAAGAACCATCAGAAGAGCCAGGTCTATCTTCGGGCAAGTCTGTTACAGATGCTCAAGACTACTCTTTACATTCTGATCAAGTGAAAAACACACTAATTAAAACCACATCttcaaagaatttaaaaatCTGTAATCAAAAGGATATCACAGCAGAAGCACCAGGTCCATCTTCTAGCTATTCTGATACAGATGTTCTAGACTCACAAAACAAAGACAACCCCTGCAATACCTGCCTTACAGCTAAAGCCCCTGCaataattgcccttcaaacagctAGAGATTTAgtgaaagattgtgttttgtACCCAGGAAAAGTAATACCAAAAAATACTAGAAAAGCAATGTATGTCCCTTCCGTTATCACGTCGAATAAATGGCGGGATATTATGAAGGCAgctgaaaaagaaaaaacagaaaaactattgaagaaaaaaaataaaccagGAAATAAAAAGATGAAGAAGAAAGTGTGTAGAATAATCGCATCTTCTGAAGAAAgtagtgatgatggtgatggtAGCGATTCAAATGCTGAAAAAGTGATAGAAGAAAGCAAAATGCCAAAAAAAGATCTCAAACGAAAAAGAAAATATTCTGAAACTGATGACACAAGTTCTGAATTTGAGTTGCCTCTAAATCAGTTAGCAAAGTTAggaaataataaaatgtgtgATGAAAACTTAAAAGTAGGATCAAACGTCATTGTTAAGTATGAAGGTGAATATTTTCCTGGAAGAGTTGAGAACAAAGATAAAGGATGTTATGAAATTAGCACAATGGTATTATCTACAAATAATACATTCCGATGGCCAGAAAAAActgataaaatttggtatggaaTTAATGAGATTGTGGAAATTATAAAGTcacctattaaagttaataaCAGAGGCTTCTTTAAAGTTACTGAGATGGAAAAGTTTTTgcccaacatttatttataa
- Protein Sequence
- MPPSKPNTKKIDVVKRKLFQYSPHKITLALNAIKNGMPVATASRDFNVPRTTLRHKISGKAPETSGHVGPQSVLGRQIENELVIWIKDCARAGFPINKEGLLDSVKKIVVKGQIATPFINDRPSRSWFDGFMARHPDLSQKHAEYINKARALITEEKIRNWFQEISSLLGEENLKILENPARVWNCDETSFFLAPKGSLVLAEKGQHVYDTSKNSDKENITTLFTVNAAGEYAPPLTIYKYKRMSSEVLDNAPNGWGVGKTDKGWMTGESFYEYVANVFIPYLKEKELTLPIILFLDGHKSHLTMHLSELCRENGIIVIALVPNTTHMLQPLDVAVFYPLKQNWRQMVKKWRIENDGQEITKFTLPSALQSLLLDNRDKFAKNVQAGFQTCGLFPFGADFVNYKRIIKDRDPKTFENRHEVAISESSYISYLESKIVPHILKDFYTTFNSGKDWEGNKEASMLYDIWLAFKNDTTATMSQPTLASHDIENAVRETPSPSLIKEDNISRNQEYIDDLTDIENEDSSSSTSLAAKEPSEGPGPSSVYPAIDIQDSENMNNSHKTSAAEKEPSEEPGLSSGKSVTDAQDYSLHSDQVKNTLIKTTSSKNLKICNQKDITAEAPGPSSSYSDTDVLDSQNKDNPCNTCLTAKAPAIIALQTARDLVKDCVLYPGKVIPKNTRKAMYVPSVITSNKWRDIMKAAEKEKTEKLLKKKNKPGNKKMKKKVCRIIASSEESSDDGDGSDSNAEKVIEESKMPKKDLKRKRKYSETDDTSSEFELPLNQLAKLGNNKMCDENLKVGSNVIVKYEGEYFPGRVENKDKGCYEISTMVLSTNNTFRWPEKTDKIWYGINEIVEIIKSPIKVNNRGFFKVTEMEKFLPNIYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00358505;
- 90% Identity
- iTF_00634417; iTF_00634418; iTF_00358505; iTF_00720217; iTF_00720218; iTF_00720219; iTF_00720220; iTF_00720221; iTF_00720222; iTF_00720223; iTF_00276352;
- 80% Identity
- -