Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856342.1:22423894-22426617[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.1e-08 1e-05 26.6 0.0 1 40 14 53 14 57 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.1e-08	1e-05	26.6	0.0	1	40	14	53	14	57	0.94

Sequence Information

Coding Sequence: ATGTCTacgaaaaaacacaaaaaaaaaactgtgactTACACTCCTGAAACTCTACAGAAGGCATTAAAAGAAATTCGCGAAGCCCATATCCCAATCAGGGAAGCATCTCGTAAATTTGGTATTCCGAGATGTACAATTCAAGATCGATTAAGTGGCAGAAGGactgacgaactaaaaaaacaggGCCCTGAGCCAGTGCTGGGAGAACAAGGCGAAAAAAAAGTGGTAGAGTGGCTTATAAATATAGCCAAATGTGGTTTTCCCGTAAAGAAACCCGAGCTATTAGATACCGTTCAAAAAATTttgaaagatttaaaaaaaccgaaccCTTTTAAGGATGATCGTCCTGGTCAGACATGGTATCTAAACTTTTTAAAACGGCACCCTGAAATATCAGTAAGATCTGCAGAAGGAATCAACAAAGCTCGCGCTAGGGTGACCGAAGAATCGATTCGACTATGGTTCCGcgaactggaaatatttttagcGCAAGAGGGACACTTAGATATATTTACAGAACCCGAAAGGATATTCAATGGCGATGAAAGTGGTTTTTCACTTTGCCCAAAATCAGGAAAAGTTCTTGGGCCCAAAGGTTATCGCAATCTCTACCAAATTAAAGCCGGCAACGAAAAAGATAACCTAACAGTACTCGCAACATTCAACGCTACTGGTGAGATGTGCCCGCCATTGGTGGTTTTTCCATATATTAGGCCACCAAAAAGTTTAACAGACAGCATGCCACAACACTGGAGTCTAGGAAGAAGCGAATCCGGGTGGATGAACGGCGATGTATTCTTCGAATACATCACTAATGATTTCAATAATTGGATCACAGAAAATAATATCAAGAAGCCCGTTCTACTGCTAGTCGATGGACATAAGTCGCATATGTCTTTGATGTTGAGCTGTATCTGTGAAGaacttggtattattttatatgcTCTTCCCCCGAACACTACGCACATGCTGCAGCCTGCCGATGTCAGCGTGTTTGCTCCTTTAAAAGCCCAGTGGAAGAGTCACGTCAGAAAATTCCTTGCAAAGCCAGAAAATTTTAACAAAGGTGtaacaaaaactaatttttgtCATCTTTTTAAAGACATAATTGAAAATCCACAAATGAAAATCAATATCGTTCATGGATTCAGGCGATGTGGTCTTTTCCCGTATGATCCGAACGCAGTCGACTATACGAAGTGTGTCCAAAACACATTGGAACAATTTAGTCGAGCGAATGGCTCGCGTGAGAACTCGGGAATAACGAATGAAGACCTCATCGCTACCCGCAAAGTGATTCGTCATTTGAGACCAGTCTTAAAAGAGAAGAAAATTGACACAAAATTTATCCTAAAGGAAATCAACAAGCTGAGAAGGGCAGAACCCAGAGAACCTCAATACATTACCGGATCCGAAGACAATACAAACTCAACACTCGACGTGTCGAGCATTCCTAattttttgtcaaatatttCGGCTCATTCATCTGCGAATGCTTCCAATCTCGCCCCGCCGCACGTTTCCGTTCCAAACCCGCCGCGTATTTCCGATGTTGCATCTGCAAATGTTACCGATCTCAATCCATCGCATATACATGATCCTACCCCACTGACTTTTGTTAATGCGGCTGAAGTTCCCGAACGTACCTCTGAGAGTGTTCCAAATCATGGCTTGTCGAATTTAGTTACATCTGATTTTAGCGGCCTTGAGTTGGGAACAGTGGTTTCACTGGACGATATTGTGGTCATACCGTTCCAAACCAGCACACCCAAGAACCAAATTCTAAGCCCTAAATCTCTAGTTCGTGATGAAATCTCTCCATATTCAAAACCGGACTCGAATAACGTCCCTCTATGCACGGAACAGATACACCAAATCCAGATTACAGATGAACCTGGAAGTTTAAAAACTTGCACCGAAATAGTTCCGCATAGTAGACCAAAAGAGCAACTGGGATCTGAAAATCGTGACACCGACTCGGTAATCCCAACTTTAAAAGACAACTTGCCATTATGTACCGTTACTACCATAGAAAAATCGAAAgacgaaaataaaattttgacatTTGGCGTCACTCGCCAGCAACTAGAAGGAAGATCTCTTTTATCACTGGATGATATTACAGTTACTCCAACTATATCAGAACATTCAAATTCTCATGACATTCTGTTAAAGAAATCATCATCTTCCACAATTATATCCGCATCCGCCAACAACAAAATTTCAATAGATCCAAACACAGTATTCGACCAACATCTGTTTATACCCCAACCTCTAGAAAAGTCCAAACAAAACGTTTCTAAAGCTCGAATTCCGTCGGCGATATCAGGGAAAAAATGGCGAGAATACCATCTACTAAAAGAAAAGGTTAAACAAGAAAAGAATGAAGAGAAAGAAAAAACCAAAGAAGCTAGAAAGCAAGCCGTGAAGCGTAAGCAAGAGgaagcaaagaaaaaaaaagaaatacacaAAGCCAAGAAACTTAAACAAGGAAAACTTTTGAAGACTAAAGAGTTaacatcaaaacaaaatattaaacaaaattgtGGCAAATGCGCAAATATCTTAAACAGTGACACTGAGGACgatgaaaacaaaaatgttggCTGTGATTTTTGTACTAAATGGTTTCATTTGAAGTGCACTGATTTTATTGGACTGACTTATGATGATGTTAAAGATAAACCGCTCAAGTGTAACATGTGCATTACTGATAcggaatag
Protein Sequence: MSTKKHKKKTVTYTPETLQKALKEIREAHIPIREASRKFGIPRCTIQDRLSGRRTDELKKQGPEPVLGEQGEKKVVEWLINIAKCGFPVKKPELLDTVQKILKDLKKPNPFKDDRPGQTWYLNFLKRHPEISVRSAEGINKARARVTEESIRLWFRELEIFLAQEGHLDIFTEPERIFNGDESGFSLCPKSGKVLGPKGYRNLYQIKAGNEKDNLTVLATFNATGEMCPPLVVFPYIRPPKSLTDSMPQHWSLGRSESGWMNGDVFFEYITNDFNNWITENNIKKPVLLLVDGHKSHMSLMLSCICEELGIILYALPPNTTHMLQPADVSVFAPLKAQWKSHVRKFLAKPENFNKGVTKTNFCHLFKDIIENPQMKINIVHGFRRCGLFPYDPNAVDYTKCVQNTLEQFSRANGSRENSGITNEDLIATRKVIRHLRPVLKEKKIDTKFILKEINKLRRAEPREPQYITGSEDNTNSTLDVSSIPNFLSNISAHSSANASNLAPPHVSVPNPPRISDVASANVTDLNPSHIHDPTPLTFVNAAEVPERTSESVPNHGLSNLVTSDFSGLELGTVVSLDDIVVIPFQTSTPKNQILSPKSLVRDEISPYSKPDSNNVPLCTEQIHQIQITDEPGSLKTCTEIVPHSRPKEQLGSENRDTDSVIPTLKDNLPLCTVTTIEKSKDENKILTFGVTRQQLEGRSLLSLDDITVTPTISEHSNSHDILLKKSSSSTIISASANNKISIDPNTVFDQHLFIPQPLEKSKQNVSKARIPSAISGKKWREYHLLKEKVKQEKNEEKEKTKEARKQAVKRKQEEAKKKKEIHKAKKLKQGKLLKTKELTSKQNIKQNCGKCANILNSDTEDDENKNVGCDFCTKWFHLKCTDFIGLTYDDVKDKPLKCNMCITDTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00445076;
90% Identity: iTF_00634338;
80% Identity: -