Ecre001918.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- lolal
- Assembly
- GCA_963693475.1
- Location
- OY856338.1:18558362-18570917[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-15 8.6e-13 49.3 0.0 1 42 322 364 322 367 0.94
Sequence Information
- Coding Sequence
- ATGTCACAACAGTACAGCTTGCGGTGGAACAACCACCAACCAAACTTCATCTCGATGTTCACCACATTGCTCAACACACAGACTCTGGTGGATGTGACATTAGCTGCCGAAGGCAAGCATATGCAAGCCCACAAGGTGGTGCTGTCGGCTTGCAGTACATATTTCCAGGCTTTGTTTGTCGACAATCCATCGCACCACCCCATCGTGATCCTCAAGGACGTGACATTCGCAGATCTACGTACGATGGTGGATTTCATGTACTATGGGGAAGTCAACGTAACTGAAGAGCAGTTGCCGCAGGTTCTGGAAACGGCGAAGCTGCTCAAAATCAAAGGTCTGACGGAGATGCCAGAATCGACGTTGACCCGCGCGCAAGGCGCCGGCGGAGCGCCCGGCGACTTCGCCCCTCCCGGCGACGCCGCGGACCCGCAGCGGATGGCCACCCCTGCCACATCGCCCTCCAACAAACGAAGAAGACGAAGGAAGAGCTCGACGGGGTCGCCGTCGCTGAACATGGTGTCGGAGGAGGGCCGCGAGGAGAACCAGACGGTCGAGCTGGTGCGGGACGGGATCACGCTGAGCAGCGTGCCGCAGCGGCGGCGGGACTACCACGAGGACAGGCACCAGGACACCTCGCAACAGacttcagaaaacccACACATGAATATGGATCCATTAGGAGTAGAAAATCCGGCCAGTATAGCTCAAGGAGGGCAGTGGAGTATGATGGAGCACGCGTACCCGCGGTACTCTGGGGCGTGCGGGCTCGGCGGCGTCGTGCAGCCGGAGGGCGGGCTCTACATGAACAACCTGGCGCCGCACGACGGAGACCTCGGCGAGTACGCGCTACCCGCGCCCGCGGCGCACGCCTCCCCCGGCCCTTCGTGCGCCGCCGAACCACCCCCGCACCACGACACCCCCCACCAGCCCCAGCCCAAACGCCGCCGCACCACCAACCCCCAGTCCGAAGAAAACTTCCAACGAGCCCTCGAGGCCGTCCGCTTCGGCGGCATCGGCTTCTGCAAGGCCGCCCGCATGTTCGGCGTCAACAACAGGACCCTCTGGCTCGAATACAAGAAGAAGGGCTACCCCAACAACCGGCCGAGCATCAAGAGCCGCATCAAGCGCGAGCACACGACGCCGCCGCCGGAGCACAAGGACGAGCCGCCGCCGGCGGAGCACCAGATGGCGCTGCTGTGCCCGCCGCACCCCGTCTCCGTGGGCTTCATCGAGTCGCGGCCCATCGACTTCCCGCTGCAGGGCATGCCGCACAGTTCCCCGCTCAACATCCTCGGCGTCAACTTCAACTCGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHMQAHKVVLSACSTYFQALFVDNPSHHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLETAKLLKIKGLTEMPESTLTRAQGAGGAPGDFAPPGDAADPQRMATPATSPSNKRRRRRKSSTGSPSLNMVSEEGREENQTVELVRDGITLSSVPQRRRDYHEDRHQDTSQQTSENPHMNMDPLGVENPASIAQGGQWSMMEHAYPRYSGACGLGGVVQPEGGLYMNNLAPHDGDLGEYALPAPAAHASPGPSCAAEPPPHHDTPHQPQPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKDEPPPAEHQMALLCPPHPVSVGFIESRPIDFPLQGMPHSSPLNILGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00635310;
- 90% Identity
- iTF_00634613; iTF_00635310; iTF_00635528;
- 80% Identity
- iTF_00634613;