Ecre028496.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- -
- Assembly
- GCA_963693475.1
- Location
- OY856354.1:27626512-27634706[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.7e-10 1.4e-07 32.6 0.0 4 38 132 167 129 172 0.89 2 4 6.9e-11 1.7e-08 35.5 0.2 3 39 185 221 183 224 0.92 3 4 7.8e-15 2e-12 48.1 0.1 2 45 239 283 238 283 0.96 4 4 4e-17 1e-14 55.4 0.0 1 41 290 331 290 335 0.94
Sequence Information
- Coding Sequence
- ATGATGAAAGATCTTCAGCGGATTTGTTGCAGCATTTTCAGTGATATTGTTGTGCCGCAGTCGGCCGGGCTGGAGGAGctggcgccggcgccgccgggCCCGGCCGCCACGCCGGTGCTGGTCAAACAGGAGCCCGGCGCGCTGCCGGCGCTCGAGACCCTCGCCAGCCTCGACACCGCGCACCACAACATGGGTGGGTCCATATTGGAAAGGCACAACATGGCGATGTTAAACTCAGCAGAAGAACTAGATTCGTCTAGTTTCACTCCGCTGCTCATCAAAGACGAGCCTTTATCGGAAGGAGAGTTCCAGCCGGCGAGCGGGGACGAGGCGGGGGACGGGGCCCGGGGGGCGGAGCACCCGCGCGGGAGCCCCAAGAGCTGGACCCAGCGAGACATGGAGCACGCGCTCGACGCGCTGCGGAACCAGCACATGAGCCTCACCAAGGCGTCGGCCCGATTCGGCATCCCGTCGACCACGCTGTGGCAGCGCGCGCACCGCGCCGGGATCGACACGCCCAAGAAGGAGGCCGGCGCCAAGTCCTGGGGGGACGCCGAGCTGCGCGCCGCGCTGCACGCGCTAAGGGCCGGACACATCTCCGCCAACAAGGCCAGCAAGGCCTACGGCATCCCGAGCAGTACGTTGTACAAGATAGCGCGTCGCGAGGGGATCCGCCTGGCGGCGCCGTTCAACGCCGCGCCCGTCGCGTGGAGGCGAGGAGACCTCACGCGCGCGCTCGCGGCCATCCGAGCCGGCGCCGCGTCCGTGCAGCGAGCCGCCGTGCAGTACGGCATACCCACAGGAACTCTGTACGGGCGCTGCAAGAGGGAAGGCATTGAGCTGTCCCGCTCCAACCCCACGCCCTGGTCCGAGgatgccatgggagaggcccTGGAAGCCGTCAGAGTCGGGCAAATGTCAATAAACCAAGCGGCTATTCACTACAATCTGCCCTATTCGTCGCTTTACGGCCGATTCAAGAGATGCAAATATTTGGTGGCTCAGGCCCAGCCAGCGACACAACAAGAGGTCCTCCATACGTCCGAAACGGCGGCGGCGGGCCCTCAACAAGATCTATCCTATTACCAGGAACCTCACGTGTCCGAATCGGACCAGCTAACAAACCAATACTCGCAGAACGGCTTCGTTCCGCATACATCGACGCTCAACAACGTGGTGATACAGGACCCGTTCGCCGGACCAGCGATGTATTACAACCAAGGGTTTAGCAGCATCGCGACGAGCTGA
- Protein Sequence
- MMKDLQRICCSIFSDIVVPQSAGLEELAPAPPGPAATPVLVKQEPGALPALETLASLDTAHHNMGGSILERHNMAMLNSAEELDSSSFTPLLIKDEPLSEGEFQPASGDEAGDGARGAEHPRGSPKSWTQRDMEHALDALRNQHMSLTKASARFGIPSTTLWQRAHRAGIDTPKKEAGAKSWGDAELRAALHALRAGHISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRGDLTRALAAIRAGAASVQRAAVQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYLVAQAQPATQQEVLHTSETAAAGPQQDLSYYQEPHVSESDQLTNQYSQNGFVPHTSTLNNVVIQDPFAGPAMYYNQGFSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00635306;
- 90% Identity
- iTF_00635306;
- 80% Identity
- -