Basic Information

Insect: Ectemnius cavifrons
Gene Symbol: -
Assembly: GCA_964023945.1
Location: OZ030386.1:12364498-12368637[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.5e-05 0.0022 18.4 0.7 1 23 146 168 146 168 0.95

2 15 0.00093 0.083 13.5 1.1 3 23 176 196 175 196 0.99

3 15 8e-05 0.0071 16.8 0.0 1 23 292 314 292 314 0.98

4 15 2.1 1.9e+02 2.9 0.2 1 23 320 343 320 343 0.93

5 15 3e-05 0.0027 18.1 2.0 1 23 369 391 369 391 0.98

6 15 1.7 1.5e+02 3.2 0.0 1 23 406 428 406 428 0.86

7 15 0.59 53 4.6 0.4 2 23 435 457 435 457 0.94

8 15 0.0039 0.35 11.5 3.0 2 19 465 482 465 486 0.95

9 15 0.00019 0.017 15.6 3.5 3 23 494 514 492 514 0.97

10 15 0.014 1.2 9.8 0.1 3 23 521 541 520 541 0.97

11 15 8.1e-06 0.00072 19.9 0.4 1 23 550 572 550 572 0.98

12 15 0.0035 0.31 11.6 0.2 3 23 580 600 578 600 0.97

13 15 0.0031 0.28 11.8 0.2 3 23 608 628 606 629 0.94

14 15 0.42 38 5.1 0.0 1 23 643 665 643 665 0.93

15 15 0.0024 0.22 12.1 0.0 1 20 1159 1178 1159 1181 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.5e-05	0.0022	18.4	0.7	1	23	146	168	146	168	0.95
2	15	0.00093	0.083	13.5	1.1	3	23	176	196	175	196	0.99
3	15	8e-05	0.0071	16.8	0.0	1	23	292	314	292	314	0.98
4	15	2.1	1.9e+02	2.9	0.2	1	23	320	343	320	343	0.93
5	15	3e-05	0.0027	18.1	2.0	1	23	369	391	369	391	0.98
6	15	1.7	1.5e+02	3.2	0.0	1	23	406	428	406	428	0.86
7	15	0.59	53	4.6	0.4	2	23	435	457	435	457	0.94
8	15	0.0039	0.35	11.5	3.0	2	19	465	482	465	486	0.95
9	15	0.00019	0.017	15.6	3.5	3	23	494	514	492	514	0.97
10	15	0.014	1.2	9.8	0.1	3	23	521	541	520	541	0.97
11	15	8.1e-06	0.00072	19.9	0.4	1	23	550	572	550	572	0.98
12	15	0.0035	0.31	11.6	0.2	3	23	580	600	578	600	0.97
13	15	0.0031	0.28	11.8	0.2	3	23	608	628	606	629	0.94
14	15	0.42	38	5.1	0.0	1	23	643	665	643	665	0.93
15	15	0.0024	0.22	12.1	0.0	1	20	1159	1178	1159	1181	0.94

Sequence Information

Coding Sequence: ATGGATGTCTCGGAGGATTTAACGTTGCAATGGGTGGAAGAAGTGGGGAATGTAATTCACGAAGAAGTCATATGTGGCTTAGAGGCAGAGTTGGTAGCTCCCGAAGGAGAAGTCATAGGAGCTTGCGAGGAAGTCGCCGTTGAGGAAACAGTGGAATCTGTTCCAGACGTTACTGCTGCGTCGGAATCAGAAATACTAATGGTTCCTCAGTCCAGCGACATGGAATCAATATACATTGTACCGCAGGACCAAGCCCATGATTACCTAAACATACAAGTTACAGAGGAAGTGATCGCAGACAACTGGGACAGGGCTGGGCCGGATGATGGGGTGGAAATTCCAGAAACAAAGGTTTCGCACGACAATTTGCTAGAGTACGACGACATGGAGATACCACTACCAATTGATCAGGACTCTTATACAAATACTCGGCCGTATCCTTGCGACTTCTGTAGCAGACGGTTCAGGAAAAAAGCCAATTTAATGAATCACATGGTCGCACACCAAACTGATCGGCCGCATGGCTGCAACTTATGTGGAGCACGTTACGTGCGAAAATGTGATTTAATGAATCATCTCAAGATACACGCATACGCACCTTCGCGAGATGGTTTAGAAGACGACTTAAATGAGGATGACCCACTGGCCACCGAAGAGGAGGAATCCTCCAAAGGCAGACGAAAGAAAGTACAATCGAGTGCTCCTAGAAAGCGGCGGAACAACACAGTCTTGCCGAAACGGCTGAACGAAGAGATCAAAATCGAGATGAGCAATGGGAGCTACGCCTCAAGCTCACGGTGGAATGAACAGATAGCTACTGTCACATCGACTCCACAAGCACCGCGATGGCCGATCACTGATCCCACTAAGCCTTACGTTTGCCAGTATTGCGGTGTCGGATTCGCAAGGGAGAAAGCCCTTGCGTCACATGCGCGCATACACGGCGGTGACAGTCCGTTCGAGTGCACATCCTGCGGCGATATGTTCTGGGACATGAATGGCCTCAGGGACCACGTTCGCTTGAAGCACGGAGCTGCCGTACATTCGGATAACGAAGAGTACGATAATGACGTCACTTACTCGACTGACGACAGGCTTGGGGAGTTCTACTGCAACACTTGCGGTGTACCCTTTCATCGTTTAGACCTATTGAAACGACACCAAAAGATCCACGTTAAACGGGATATCGACGCGGTGGAAGGCTCGAGTCAACATCACGTTTGTAATGTATGCGGTGAATGGTTTGAAGAAGCCTTGGCATTATTAGCGCATGCTGAATTACACGCTAGATCGCCGGCTCGTCGTTGCCTATTATGCGGTGAGAAGTGTCGCGACGATGCCGAAGTTGCCGAGCATGTACGACAAAATCATGCGGAAGATGCTCCACCCAATACCTGCACACTATGCGGCAAAACATGCAAGGACAAGAGAAGCTTACTGAAACACTCCTGGGTACACAATGTTGATAAAACGTTTGGCTGCACAAAGTGCGGAAAACGGTTCCACAGCAAAGCCAGACTACGAAGgcaTATGGTATCTCATCGCAATAAAATGGTTGCGTGCGATGAATGTGGCGAGGAGTTTCCAGACGGGCGAGCACTTGTCAGCCATCGGCATTCGCATAATAAGGAGCTGGGTGGGCGGACATTTCCATGCAGAGAGTGTGGAAAGACTTTCGGGAGTCGAAGCTCGCAGCAGATCCATATTCGTATTCATACTGGTGAAAGGCCGTACGGTTGCCGATTTTGTTGGAAGGCCTTTGCTGATGGAGGAACATTGCGCAAGCACGAACGTATTCACACAGGAGAGAAGCCATATGGTTGCGCGATATGTCCCCGTGCTTTCAATCAAAGAGTTGTCCTGAGAGAACATGTGCGCGCTCATCACTCCGGGCCGGATCCAAAGTGTGTCGGTAGTCTAACTCCGTATCTTTGCAAGGTTTGTGGTGATTCATACGGAACGTCCGAAGAGATTGTTGCCCATATTGTGCAGCATTGCGACGATAATACGGCGCTGCGCCGTCAGCCGCAGCAAGGACCGCGTAAGTATAAGCGCAGGCGCAAGCTTAAGCCCCACGAAGCaggagcaacagcagcagcaccaccaccacaacctccgccaccgccacccttGATGCGTACCAGCGAGCAATATGAAATGCTTGAAGGGGCATCGGATTCGGATGATAATACTAAGAGGAAACTTGGCAAAAAGAACAAGCAGCAACATCGATCGAACGTCGAGGAAGGCTTTCAGAACGTTCTCAAGAGCTTTGAAAGTTCTTTGCAGAACATTAACTCGATCGTAAGCAATTCAAAGTTAAACCCGGCGAAATCAAAACTATCGAAGAAGAAgctgaagaaagaagagaagaagaacgaGTCGCAGGCTGCTAGTCAGCCTGGTAGACCGAAAATGATCCATACGCAGAAGACCAGAGTACCTGTAGAGATCGGTAGTGACGGGGTGAAGAAGGGCCAGAAAACCAAGACGATGGTAACAAGGACTCCAAAGGTTATGCCGAATGAGCACAAGTTGGGTATCTTCCCCGGCGGCGAAAGAAATCGACCGAGAACAAAGAATGTCAGTTACCACATTGAGGGAAAACTCCAACTGACGTCCGCGGCCTTTCCAAGGCCAAAGGAAGAGCCACCAAGGGGTTCACCATCGATGCAGCATCACCAGCATCAGTTGCAAttgcaacagcagcagcagcaacagtaTCATGCCGACATAGCGGCAAACATAAAGATGGAACCTTTCATGGATAGCAGCACAAATAACATGGTGGATCATAGAAACAACAATGGCACCTTGATTGGCGGAGATAATGACAAGTTGTTCGACGCCACTACCAAGAAGAAAGGTGGTGGAGTGGTGCGCAAAGTGAAACGACAAAAGCACAATGTGAAGCGGGAGCCGGTCGATCCGAATGAGGAGGAGCAGTATCAGCAGCATAACAGTAGTAGGACCGAGTGCGAGGGTGAACAGACGCGTTTGATACAAGATGCAGTCCTTGATGGGGCAAGCCTCCAAGTAGCATTTGAGGCAAGTGTAAAAACCGAGGTCCCAACGGATCATGATATCGCGACGGAGATGGAAACTGAGGGCGGACCTGAGCCAGCCATAGGGCAGAAACTCAAGATGGAAAATATGCCGGTTCCTGTCTCGGTTGTAACTTCTTCCCAGGTCCACTCAATGATTAGGGTTGGCGGTAGAGCTGGTACGCGTGCCTGCACCAGAGCCGCCGCTATGAGCGCTGATTTCGGCGGTGCTCTCAGAACGGAGAGCAGGTCGGCTAATGATAGCGCTCTCACCAGCATCGAGCAACTGGGCAACAGTGAAGACGTGGACGCCGGCAGCGTAAAACTCAGTGTAAAGGTTGAATCGGCACCACAGAGCATTCTGGGAGTACACGGCGTCATCACACCAGTTGACGACGTTTCGGAGACGATTATACCAGACATTGTAGAGTATACTTGTGAGATGTGCTCCGCAGTATTCTCTAGTCGTGCAGAGTTATTGGTCCACGTACCAATACACATTTGA
Protein Sequence: MDVSEDLTLQWVEEVGNVIHEEVICGLEAELVAPEGEVIGACEEVAVEETVESVPDVTAASESEILMVPQSSDMESIYIVPQDQAHDYLNIQVTEEVIADNWDRAGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPSRDGLEDDLNEDDPLATEEEESSKGRRKKVQSSAPRKRRNNTVLPKRLNEEIKIEMSNGSYASSSRWNEQIATVTSTPQAPRWPITDPTKPYVCQYCGVGFAREKALASHARIHGGDSPFECTSCGDMFWDMNGLRDHVRLKHGAAVHSDNEEYDNDVTYSTDDRLGEFYCNTCGVPFHRLDLLKRHQKIHVKRDIDAVEGSSQHHVCNVCGEWFEEALALLAHAELHARSPARRCLLCGEKCRDDAEVAEHVRQNHAEDAPPNTCTLCGKTCKDKRSLLKHSWVHNVDKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKELGGRTFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCVGSLTPYLCKVCGDSYGTSEEIVAHIVQHCDDNTALRRQPQQGPRKYKRRRKLKPHEAGATAAAPPPQPPPPPPLMRTSEQYEMLEGASDSDDNTKRKLGKKNKQQHRSNVEEGFQNVLKSFESSLQNINSIVSNSKLNPAKSKLSKKKLKKEEKKNESQAASQPGRPKMIHTQKTRVPVEIGSDGVKKGQKTKTMVTRTPKVMPNEHKLGIFPGGERNRPRTKNVSYHIEGKLQLTSAAFPRPKEEPPRGSPSMQHHQHQLQLQQQQQQQYHADIAANIKMEPFMDSSTNNMVDHRNNNGTLIGGDNDKLFDATTKKKGGGVVRKVKRQKHNVKREPVDPNEEEQYQQHNSSRTECEGEQTRLIQDAVLDGASLQVAFEASVKTEVPTDHDIATEMETEGGPEPAIGQKLKMENMPVPVSVVTSSQVHSMIRVGGRAGTRACTRAAAMSADFGGALRTESRSANDSALTSIEQLGNSEDVDAGSVKLSVKVESAPQSILGVHGVITPVDDVSETIIPDIVEYTCEMCSAVFSSRAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00391494;
90% Identity: -
80% Identity: -