Basic Information

Insect: Crossocerus cetratus
Gene Symbol: -
Assembly: GCA_963675795.1
Location: OY776665.1:1145332-1149347[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.6e-05 0.0023 18.4 0.7 1 23 146 168 146 168 0.95

2 15 0.00096 0.085 13.5 1.1 3 23 176 196 175 196 0.99

3 15 9.2e-05 0.0081 16.7 0.3 1 23 295 317 295 317 0.98

4 15 0.57 50 4.7 0.2 1 23 323 346 323 346 0.93

5 15 3.1e-05 0.0028 18.1 2.0 1 23 372 394 372 394 0.98

6 15 2.4 2.1e+02 2.8 0.0 1 23 409 431 409 431 0.86

7 15 2 1.7e+02 3.1 0.3 2 23 438 460 438 460 0.94

8 15 0.004 0.35 11.5 3.0 2 19 468 485 468 489 0.95

9 15 0.00023 0.02 15.4 3.1 3 23 497 517 495 517 0.97

10 15 0.0098 0.86 10.3 0.1 3 23 524 544 523 544 0.97

11 15 8.3e-06 0.00074 20.0 0.4 1 23 553 575 553 575 0.98

12 15 0.0036 0.32 11.7 0.2 3 23 583 603 581 603 0.97

13 15 0.0032 0.28 11.8 0.2 3 23 611 631 609 632 0.94

14 15 0.055 4.8 8.0 0.0 1 23 646 668 646 668 0.93

15 15 0.0025 0.22 12.1 0.0 1 20 1151 1170 1151 1173 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.6e-05	0.0023	18.4	0.7	1	23	146	168	146	168	0.95
2	15	0.00096	0.085	13.5	1.1	3	23	176	196	175	196	0.99
3	15	9.2e-05	0.0081	16.7	0.3	1	23	295	317	295	317	0.98
4	15	0.57	50	4.7	0.2	1	23	323	346	323	346	0.93
5	15	3.1e-05	0.0028	18.1	2.0	1	23	372	394	372	394	0.98
6	15	2.4	2.1e+02	2.8	0.0	1	23	409	431	409	431	0.86
7	15	2	1.7e+02	3.1	0.3	2	23	438	460	438	460	0.94
8	15	0.004	0.35	11.5	3.0	2	19	468	485	468	489	0.95
9	15	0.00023	0.02	15.4	3.1	3	23	497	517	495	517	0.97
10	15	0.0098	0.86	10.3	0.1	3	23	524	544	523	544	0.97
11	15	8.3e-06	0.00074	20.0	0.4	1	23	553	575	553	575	0.98
12	15	0.0036	0.32	11.7	0.2	3	23	583	603	581	603	0.97
13	15	0.0032	0.28	11.8	0.2	3	23	611	631	609	632	0.94
14	15	0.055	4.8	8.0	0.0	1	23	646	668	646	668	0.93
15	15	0.0025	0.22	12.1	0.0	1	20	1151	1170	1151	1173	0.94

Sequence Information

Coding Sequence: ATGGATGTCTCGGAAGACTTAACGCTGCAGTGGGTGGAGGAAGTGGGGAATGTAATTCACGAAGAAGTCATATGTGGCTTAGAGGCAGAGTTGGTTGCCCCCGAAGGGGAAGTCATAGGGGCTTGCGAAGAAGTGACTGTGGAGGAAACGGTGGAATCCGTTCCTGATGTATCCACTGCGTCGGAATCAGAAATTCTCATGGTTCCACAGTCTAATGACATGGAATCAATATACATTGTACCACAGGACCAAGCACATGATTACCTAAACATACAAGTTACAGAGGAAGTAATTGCAGACAACTGGGATAGAGCTGGGCCAGATGATGGGGTCGAAATACCAGAAGCAaaggtttctcatgacaacttGCTTGAGTACGATGACATGGAGATACCACTACCGATCGATCAGGACTCTTACACAAACACTCGACCATATCCCTGCGACTTCTGCAGTAGACGCTTCAGAAAAAAGGCCAATTTAATGAATCATATGGTTGCCCATCAAACTGACCGGCCGCATGGCTGTAACCTGTGTGGAGCGCGTTACGTGCGAAAATGTGATTTGATGAATCATCTAAAAATCCATGCATACGCACCAGCTCGCGATGGATTGGAGGATGAACTAAACGAGGACGACCCTTTGGCTACTGAAGAGGAGGAATCCACCAAAGGCAGACGAAAGAAAGTTCAGTCTAGCGCCCCTAGAAAACGGCGAAATACCACCGTCTTACCGAAACGAGCCGTTAACGATGACATCAAAATCGAGATGAGCAAGTACGTCAATGGGAACTATGCCTCGAGCTCACGGTGGAACGAACAGATAGCCACTACATCAGCACCGCAAGTACCGCGATGGCCGATCACCGATCCCACCAAACCTTACGTTTGTCAGCATTGCGGTCTTGGATTTGCGAGGGAGAAAGCCCTTGCGTCGCATTCACGCATACACGGCGGTGACAGTCCGTTTGATTGTACATACTGCGGTGATATGTTCTGGGACATGAACGGCCTTAGGGACCACGTTCGCTTGAAGCACGGAACTACTGTACACTCTGATAACGACGAGTATGATAATGACGTCGGTTACACAACTGAGGAGAGACTCGGCGAGTTCTACTGCAACACTTGCGGTGTACCGTTTCATCGTTTGGATCTGTTGAAACGCCACCAAAAGATTCATATCAAGCGAGATATAGATGCAGTGGAAGGATCAAGTCAACATCACATGTGCAATGTATGCGGCGAATGGTTCGAAGAAGCGTTGGCACTGTTGGCACATGCTGAGTTACACGCTAGGTCGCCGGCACGCCGTTGCTTGTTATGCGGTGCGAAATGCCGCGATGACGCTGAAGTTGCCGAACATGTGCGACAAAATCATGCGGAAGATGCTCCACCAAATACCTGCACGCTCTGTGGGAAAACTTGTAAGGATAAGAGAAGCTTGCTGAAGCACTCTTGGGTGCATAACGTCGATAAGACATTTGGCTGTACACAGTGCGGGAAGCGGTTCCACAGTAAAGCCCGACTGCGAAGGCATATGGTGTCTCATCGTGATAAAGTGGTCGCGTGCGATGATTGTGGCGAGGAGTTTCCCGACGGGCGAGCCCTCGTCAGCCACCGGCATTCGCATAATAAGGATCTGGGTGGGCGCACATTTCCCTGCAGAGAGTGTGGAAAGACTTTCGGAAGTCGAAGCTCGCAACAGATCCATATTCGTATTCATACCGGCGAAAGGCCGTACGGCTGCCGATTTTGTTGGAAGGCTTTTGCTGATGGCGGGACATTACGCAAGCACGAGCGTATTCACACAGGAGAGAAGCCATATGGTTGCGCGATATGTCCCCGTGCGTTCAATCAAAGAGTTGTTCTGAGAGAACATGTGCGCGCTCATCACTCCGCGCCGGATCCAAAATGTGTGGGCAGCCAAACGCCGTATCTCTGTAAGGTTTGTGGTGTCTCGTATAGTTTGCCCGAAGACATTGTTGCACACATCGTGCAGCACTGTGACGATAATACTGCGCTGCGTCGTCAGCCACAGCAAGGGCCGCGTAAGTATAAACGAAGGCGCAAGCTTAAGCCGCATGAAGcagcaccaccgccaccgcccctGATGCGTGCCCCCGAGCAGTATGAAATGCTCGAGGGGGCATCGGATTCGGACGATAATACTAAGAGAAAACTTGGTAAAAAGAATAAGCAGCATCGCTCCAACGTCGAGGAAGGCTTTCAGAACGTTCTCAAGAGTTTCGAAAGTTCCTTGCAGAATATTAACTCGATCGTGAGCAATTCCAAGTTAAACCCAGCGAAATCAAAATTGTCCAAGAAGAAGCTGAAGAAGGACGATAAGAAGAACGAGGGTTCACAGGCTGCTAGCCAGCCTGGTAGGCCGAAGATGATACATACGCAGAAAACGAGAGTACCTGTCGAAATCGGTAGCGATGGAGTGAAAAAGGGCCAAAAAACCAAGACAATGGTGACGAGAACACCAAAAGTTATGCCAAATGAACACAAGTTGGGCATCTTCCCCGGCGGCGAGAGGAATAGGCCGAGAACAAAAAATGTCAGCTATCACATTGAAGGGAAACTCCAATCGACGCCGGCAGCCTTCCCAAGGGCAAAGGAAGAGCTACCAAGAGCTTCGCCACCGATCCATCAACATCAGCAGCATCAGCTGCAAttacaacagcagcaacagtaCCATCCCGAGATAGCGGCGAATATAAAGATGGAACCTTTCTTAGAGAGTAGCACAAACAACATGGTCGACCATAGGAATAACAATGGTACCATGATTGTTGCGGAGAACGAGAAGTTATTCGAGGCCAGTACCAAGAAGAGAGTTGTGCGCAAAGTGAAGCGGCAAAAGCACAATGTGAAGCGGGAGCCGGTTGATCCGATCGAGGAGGAGCAATATCAGCAACATACCAATAGTAGGACCGAGTGTGACGGTGAGCAGGCGCGTTTCATGCAAGATTCGGTTCTGGATGGGGCAAATCTCGAGGTGGCATTCGAGGCCAGTGTGAAAACCGAGATGCCGACGGATCACGATATTCCGATGGAAATCGAAGTTGAGAGCAGACCTGAGATACCGAGCCACCACCACGTTCAGAAACTCAGGATGGAAATGCCGGTTCCGGTCTCGGTTGTATCCTCTTCCCAGGTTCACTCAATGATCCGAGTTGGCCGTAGAGCTAGGACGCGAGCTTGCACGAGGGCAGCCGCTATGAGCGCGGATTCCGAAGATGGCCAATGGACGGAGACAGTGTCGGCGAAGGAACGGGCCGTCCCCACCGCCATGGTCCAAGCGGCCCACAGTGAGGACATAGGCCACGGAAACGTCAAActcagtgtaaaacttgaaTCAGCATCACAAAGGATGTTGGGAGTACACAGCGTCATCACACCAGTTGATGATGTCTCGGAGACGATTATACCAGACATTGTAGAGTATACTTGTGAGATGTGTTCCGCAGTATTCTCCAGCCGCGCCGAGCTATTGGTCCACGTACCAATACACATTTGA
Protein Sequence: MDVSEDLTLQWVEEVGNVIHEEVICGLEAELVAPEGEVIGACEEVTVEETVESVPDVSTASESEILMVPQSNDMESIYIVPQDQAHDYLNIQVTEEVIADNWDRAGPDDGVEIPEAKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPARDGLEDELNEDDPLATEEEESTKGRRKKVQSSAPRKRRNTTVLPKRAVNDDIKIEMSKYVNGNYASSSRWNEQIATTSAPQVPRWPITDPTKPYVCQHCGLGFAREKALASHSRIHGGDSPFDCTYCGDMFWDMNGLRDHVRLKHGTTVHSDNDEYDNDVGYTTEERLGEFYCNTCGVPFHRLDLLKRHQKIHIKRDIDAVEGSSQHHMCNVCGEWFEEALALLAHAELHARSPARRCLLCGAKCRDDAEVAEHVRQNHAEDAPPNTCTLCGKTCKDKRSLLKHSWVHNVDKTFGCTQCGKRFHSKARLRRHMVSHRDKVVACDDCGEEFPDGRALVSHRHSHNKDLGGRTFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSAPDPKCVGSQTPYLCKVCGVSYSLPEDIVAHIVQHCDDNTALRRQPQQGPRKYKRRRKLKPHEAAPPPPPLMRAPEQYEMLEGASDSDDNTKRKLGKKNKQHRSNVEEGFQNVLKSFESSLQNINSIVSNSKLNPAKSKLSKKKLKKDDKKNEGSQAASQPGRPKMIHTQKTRVPVEIGSDGVKKGQKTKTMVTRTPKVMPNEHKLGIFPGGERNRPRTKNVSYHIEGKLQSTPAAFPRAKEELPRASPPIHQHQQHQLQLQQQQQYHPEIAANIKMEPFLESSTNNMVDHRNNNGTMIVAENEKLFEASTKKRVVRKVKRQKHNVKREPVDPIEEEQYQQHTNSRTECDGEQARFMQDSVLDGANLEVAFEASVKTEMPTDHDIPMEIEVESRPEIPSHHHVQKLRMEMPVPVSVVSSSQVHSMIRVGRRARTRACTRAAAMSADSEDGQWTETVSAKERAVPTAMVQAAHSEDIGHGNVKLSVKLESASQRMLGVHSVITPVDDVSETIIPDIVEYTCEMCSAVFSSRAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00633809;
90% Identity: -
80% Identity: -