Basic Information

Insect: Ectemnius cavifrons
Gene Symbol: -
Assembly: GCA_964023945.1
Location: OZ030383.1:10372151-10376926[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.6e-05 0.0041 17.6 1.4 1 23 446 468 446 468 0.96

2 17 0.0027 0.24 12.0 1.6 1 20 474 493 474 496 0.94

3 17 1.1e-05 0.001 19.5 1.4 1 23 502 524 502 524 0.98

4 17 6.6e-05 0.0059 17.1 4.4 1 21 530 550 530 552 0.95

5 17 8.9e-06 0.0008 19.8 5.6 1 23 558 580 558 580 0.99

6 17 2e-05 0.0018 18.7 5.3 1 23 586 608 586 608 0.97

7 17 7.7e-05 0.0069 16.9 6.9 1 23 614 636 614 636 0.96

8 17 7.5e-08 6.8e-06 26.3 2.7 1 23 642 664 642 664 0.98

9 17 5.6e-05 0.005 17.3 6.7 1 23 670 692 670 692 0.97

10 17 4.6e-07 4.1e-05 23.9 2.9 1 23 698 720 698 720 0.98

11 17 6.8e-06 0.00061 20.2 7.8 1 23 726 748 726 748 0.98

12 17 2.2e-05 0.0019 18.6 9.1 1 23 754 776 754 776 0.98

13 17 2.2e-05 0.002 18.6 7.6 1 23 782 804 782 804 0.98

14 17 0.0014 0.12 12.9 8.8 1 21 810 830 810 832 0.94

15 17 1e-05 0.00093 19.6 0.4 1 23 838 860 838 860 0.98

16 17 0.025 2.2 9.0 4.5 1 23 870 892 870 892 0.98

17 17 4e-07 3.6e-05 24.1 1.3 1 23 898 920 898 920 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.6e-05	0.0041	17.6	1.4	1	23	446	468	446	468	0.96
2	17	0.0027	0.24	12.0	1.6	1	20	474	493	474	496	0.94
3	17	1.1e-05	0.001	19.5	1.4	1	23	502	524	502	524	0.98
4	17	6.6e-05	0.0059	17.1	4.4	1	21	530	550	530	552	0.95
5	17	8.9e-06	0.0008	19.8	5.6	1	23	558	580	558	580	0.99
6	17	2e-05	0.0018	18.7	5.3	1	23	586	608	586	608	0.97
7	17	7.7e-05	0.0069	16.9	6.9	1	23	614	636	614	636	0.96
8	17	7.5e-08	6.8e-06	26.3	2.7	1	23	642	664	642	664	0.98
9	17	5.6e-05	0.005	17.3	6.7	1	23	670	692	670	692	0.97
10	17	4.6e-07	4.1e-05	23.9	2.9	1	23	698	720	698	720	0.98
11	17	6.8e-06	0.00061	20.2	7.8	1	23	726	748	726	748	0.98
12	17	2.2e-05	0.0019	18.6	9.1	1	23	754	776	754	776	0.98
13	17	2.2e-05	0.002	18.6	7.6	1	23	782	804	782	804	0.98
14	17	0.0014	0.12	12.9	8.8	1	21	810	830	810	832	0.94
15	17	1e-05	0.00093	19.6	0.4	1	23	838	860	838	860	0.98
16	17	0.025	2.2	9.0	4.5	1	23	870	892	870	892	0.98
17	17	4e-07	3.6e-05	24.1	1.3	1	23	898	920	898	920	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAACATGCATTGCCAGCTACAACGCAGGCACAACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCATACCCAGGTGGTTTGGCTACCGCGACCAGTCTCGGCAATGTAGGAAATACCCCGCATTCATCCGCGGACCTGCGTGTAGGTACAGCTGTAGCGTTAGCCTCCTCGGTAGCTAAGTATTGGGTCCTCACCAATCTGTTTCCCGGACCGCTACCTCAGGTCTCGGTCTATCACCATTCTCACAACTCCTCGCATAGGAGTGGTGGAGGTGGGGAGGCATCTTCCAAAGAATCAGCCTCTTCATTGAATCAGGATATGGCGTTGACTACCAGTTCACATCATCAGTCAGCTACTtcgcatcatcatcatcatcaatcTGCGGTTAGCAGCAACAGCCATCATACCACGTTACAGCCAAATGCACAGATTCCAGTTTCTCTCCCGGGTCTCAGTTTAGACGGTGCACATATTCCAGCGAGTGTTAGTCACATACAAGCAGCACATGCACAAATGCAACAACAAATGCAAGCACAACAGCaacagctgcaccagcagcaacagcagcagcagcagcagcaaccccagcagcaacagcaacagcagtcCCATCATCAGATGCAAAATCATCAGAATGCTCAGAATAATGGACCAAGCGCGCATAATCAAAACGCACAGAGAGACGATAATAAAGTAAAGGATGAAAACGGAAGTTGTACAACAGAACGTTGTAGCGATAATCAAGTGCATTGCCAAGTTCAATGTGATTTACAACTGCAACCAACACAGGATCTCCAACAAAGCCTCatgcagcaacaacagcagcagcaacagatTGGCGTCAACATAAGCGCAAGTTCATCCACGGAAGGTGGAAATCAAAACTCTTCCGAGAAACcggaaaaggaaaaagaacTTCGGCAGCTGAATATGACACAATTTCAAGTACCAGACTTAAAACCTGGCGGTCATATGATGGACGTGCGAACAGCTGATGGTTCGGTTGTGAAAATTAGTGCTGGAAATGAACAAGATCTAGCTAAAACTCTTGGAGTTGAAATGGTTCAAAACATGTACAAGGTAAACGTCGAAGACATCAATCAACTGCTGGCGTATCATGAAGTTTTCGGGAAGTTGCAAAGTGAAATCGCGGCTGGTACTACCTTGGTTGGGAGTACAGTTCCTACACAGACAGTTACCACTATACAGAACGGGACACCGATCGTGCAGCAAgttcaattaaataaattcgatATCAAAACAAGCGATGGGGAAGCTACTCCAGGACCAAGTGCATCGCCGGTATCAGTGGGGAGCCACGCATGTGAGATATGTGGGAAGATCTTTCAATTTCGTTACCAGCTTATCGTACACCGAAGGTATCATATAGAAAGGAAGCCATTTACCTGCCAGGTGTGCGGTAAAGCGTTTTTAAATGCAAATGACTTGACCCGTCATGGAAAGTGTCACTTGGGTGGATCCATGTTTACATGTACAGTGTGCTTTCATGTATTCGCAAATGCACCCTCGCTCGAACGTCATATGAAAAGGCATGCAACCGACAAGCCTTATAACTGCACGGTGTGCGGTAAGAGTTTCGCGAGGAAGGAACATCTGGACAATCATACACGCTGTCATACTGGGGAAACACCGTACAGATGTCAGTACTGTTCTAAGACATTCACACGCAAAGAACACATGGTAAATCATGTACGCAAACACACCGGTGAAACTCCACATCGATGCGATATCTGCAAGAAAAGTTTTACACGTAAAGAGCACTTTATGAACCACGTCATGTGGCACACAGGAGAAACGCCTCATCATTGCCAAGCTTGCGGCAAGAAGTACACGCGTAAAGAGCATCTTGCAAACCATATGCGCTCACATACCAATGATACACCTTTCCGTTGTGAAATATGCGGCAAGTCTTTCACACGAAAGGAACACTTTACGAACCATATAATGTGGCATACGGGAGAAACACCGCATCGATGTGACTTTTGCTCGAAGACGTTTACGCGGAAGGAGCATCTTCTCAATCACGTGCGTCAGCATACGGGCGAGACGCCCTTCCGCTGTCAATATTGCCCTAAAGCATTTACGCGGAAGGACCATTTGGTGAACCACGTCAGACAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGAGGAAGGAACATTTGACAAATCACGTGCGTCAACATACAGGCGAATCGCCACACCGATGTCACTTCTGCTCTAAATCGTTTACACGTAAGGAGCATTTGACGAATCACGTGCGAATCCATACCGGCGAATCTCCGCACAAGTGTGAGTTTTGCCAAAGGACGTTCACTAGGAAAGAACATCTCAataatcatctccgtcagcaCAGCGGAGATTCCTCACATTGTTGCAATGTGTGTTCAAAACCATTTACAAGAAAGGAACATCTTGTAAATCATATGCGTTGTCATACTGGTGAACGCCCATTTGTATGCACAGAATGTGGTAAGAGTTTCCCTCTCAAGGGTAACCTATTATTCCACATGCGATCGCACAATAAAGGAAGCAACGCGGAGAGACCTTTCCGCTGTGATTTGTGTCCAAAGGACTTCATGTGCAAAGGACACTTGGTGTCGCACAGACGTTCGCACTCGGACGAACGACCACACAGCTGCCCGGACTGTGGTAAAACCTTTGTTGAGAAAGGCAATATGCTGAGACACTTGAGAAAGCATGCAGCCGAAGGGCCACCGACCCAAGTCAGTACGCCATCGGCCATTCCTCAGTCTGGTGTGTTACCGATACCCGCAGCAGCGGTTCTAGTCGGTCATCCCCTAGCACCACCGGCGCCACCCGTTGTACCACAACATACAGTTGTTGTGCCAACTCCGCCAGGTGTGCTGACCTCTTACTGA
Protein Sequence: MNSEQHALPATTQAQQEDVNAGQSGRPSYPGGLATATSLGNVGNTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHNSSHRSGGGGEASSKESASSLNQDMALTTSSHHQSATSHHHHHQSAVSSNSHHTTLQPNAQIPVSLPGLSLDGAHIPASVSHIQAAHAQMQQQMQAQQQQLHQQQQQQQQQQPQQQQQQQSHHQMQNHQNAQNNGPSAHNQNAQRDDNKVKDENGSCTTERCSDNQVHCQVQCDLQLQPTQDLQQSLMQQQQQQQQIGVNISASSSTEGGNQNSSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHIERKPFTCQVCGKAFLNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQACGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHKCEFCQRTFTRKEHLNNHLRQHSGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQSGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00625640;
80% Identity: -