Ecav016530.1
Basic Information
- Insect
- Ectemnius cavifrons
- Gene Symbol
- bab1
- Assembly
- GCA_964023945.1
- Location
- OZ030388.1:4978403-4980175[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-15 5.6e-12 45.2 0.1 3 45 341 383 339 383 0.92
Sequence Information
- Coding Sequence
- ATGGCGAGCGCTTCCCAGCAGTATTGTCTCCGCTGGAACAATCATCGCTCGAATCTGCTGACGGTGTTCGACGAGCTGCTTCAAAACGAGGCCTTCACGGACGTGACCCTGGCGGTGGACGGAGGCGCGTCGGTCAAGTGCCACAAGATGGTACTAGCCGCGTGTTCCTCGTACTTCCAGAGTCTCTTCATTGACTTGCCTTGTAAACATCCGATCGTCGTCCTCAAGGACGTCAAGTACTCGGAGATCAAAGCGATCCTAGAGTACATGTACCGAGGCGAAGTAAACGTCGCTCAGGAACAACTCGGTGGTCTCCTGAAAGTCGCCGAGGTCCTGAAGGTGAAGGGTTTGGTAGAAGAGAACGGTTCACAGGGTCGCCGCGATGAAGTTGAGACTTCGATGTCGCCTCCACCAGCGATCAGCACTAGCACGACTAGCAGCGCTGCTCATAGCAGCGGCCACATTTCACCGCCGCACTCAACCGGTAGCGCTTACTACGGAAAATCGCCGGTAGATCGCGCACAGGGTCGCCTTTCACTGCCAATGTGGGCCCTTTCGGGACTTCCGCTCTCTCAACATAATTCCGGACACCCTGCACCTCCGCATCCTCAACATGGTTCTATCCTTAGCGGTTCCTATGATAATGGTTTCGAAACTTCACCGCTCAAGCGGAAGAAACTCTCTAATATGTTGATGAATCGAGACACGCCGATTTTAAGGACCGTTCTCGGACAGGGACACGCTGATAGTTCCCAGGGAATCCCTTTGTTGCATCCCGATAGTCATGAGACTCATTTTAGATCGAATAGTAATGGATCTTCCAGTGAAAATGATAGACGTAATAGTACCGATTTGATTCACGGTGAACCCGCTCATAGTCCTTACACGGATGTCTCTGTTATGGATGAGGATGATAAACAACCTTCTCCTCAATCTTATCCCGGTGATGTGAAATCAGgAATAGCCAACTACGTACCAGCACAGAAACCAGAATGGAAGCGTTACAAGCAGTACACTCGGAACGACATAATGTCAGCGATCGAAGCGGTGCGTTCCGGAATGAGCGCTCTCCAAGCCGCAAGGAAATACGGTGTTCCATCCAGGACTCTTTACGACAAAGTAAAAAAGCTTGGCATAACAACATCAAGACCTTTCAAGCGAGGATCTAACGGAAGTGGAGCTTGTTTCCCATATGGTATTGGTGGGAATGTGAATGGCAGCATTTACAGCGGTGGTCTCTCCGAGAATGAGACAGAGAACGAGCGGAATTCCGGTGGAGATGGAGTGCCAATGGCAGAGGGAGCTTACGTGAAATCAAGAGAAGGCGAGTCGATGTTGGACATCACGCGTTGCAGTCCAAGTCCAGTGATTCACTCTCTTCAACAACAACAGGCGAACGAGGACCAAGTGGAGGATCTTTCGGTGAGCCGTAAGTCGTCGGATGTGCGGGTGATCGTACCGCCGACCTCGGTggtgaaagaggaggaagtagAAGTTGGCTCGGATGCCTGCAATCATAACTAG
- Protein Sequence
- MASASQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDGGASVKCHKMVLAACSSYFQSLFIDLPCKHPIVVLKDVKYSEIKAILEYMYRGEVNVAQEQLGGLLKVAEVLKVKGLVEENGSQGRRDEVETSMSPPPAISTSTTSSAAHSSGHISPPHSTGSAYYGKSPVDRAQGRLSLPMWALSGLPLSQHNSGHPAPPHPQHGSILSGSYDNGFETSPLKRKKLSNMLMNRDTPILRTVLGQGHADSSQGIPLLHPDSHETHFRSNSNGSSSENDRRNSTDLIHGEPAHSPYTDVSVMDEDDKQPSPQSYPGDVKSGIANYVPAQKPEWKRYKQYTRNDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSGACFPYGIGGNVNGSIYSGGLSENETENERNSGGDGVPMAEGAYVKSREGESMLDITRCSPSPVIHSLQQQQANEDQVEDLSVSRKSSDVRVIVPPTSVVKEEEVEVGSDACNHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071088;
- 90% Identity
- iTF_00391423;
- 80% Identity
- iTF_00633728;