Ecav005552.1
Basic Information
- Insect
- Ectemnius cavifrons
- Gene Symbol
- ttk
- Assembly
- GCA_964023945.1
- Location
- OZ030377.1:17911244-17913412[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 6.9 1.3e+04 -3.9 0.1 31 40 181 191 181 195 0.78 2 5 4.7e-08 8.8e-05 22.2 0.1 2 38 200 236 199 242 0.85 3 5 1.3e-09 2.4e-06 27.2 0.0 2 39 250 286 249 293 0.86 4 5 0.094 1.8e+02 2.0 0.0 21 34 320 333 306 338 0.80 5 5 1.7e-11 3.3e-08 33.2 0.1 4 38 364 398 361 403 0.94
Sequence Information
- Coding Sequence
- ATGTCCGAGGGCACTGACCAACATGAAATTAACGAGAGCTATTGCTTTAAATGGAATGACTATGAAAATCACTTGTCCGATGTTGTTAAACAGCTCTTGCAAGAGAATTGCATGGTGGACGTTACCCTGGCTGTTGCTGGGGAACACATTCTCGCACATCGTATTGTCCTCTGTGCTTGTAGCAGCCTGTTTCGAGAAGTCTTGAGTAATGCGAATGAAGATCACCCAACTATTATAATAACTGACATATCGCCGCAAGATATGAGATCTATCATAGAGTTTGCTTATAATGGTGAAGTTAAGATACCagttgaaaatattaatagctTATTGGATGCTGCCCGTTCTTTGAAAATATGTGGTTTACTTGAGATCGAGGACGTTGATGAAACTGCCTTAACTTTGGATTCTAAAGATTACACTGAAAGTGGCGAGGAGCCAATGACTGTGATAAATGAAACAGAGGAGAGTATGACAGGAACTATGAAAGGCGAGATGGTGGATGATTTGgaggaaattaaatatcaagCCCAGTGTGAGAGTTCATTTAATAAGCGAAGGAAACGTAGACGAGACAGTGGAAAACGAGATTACAGTGATGATATGTTAGCATCGGCAATTGCTGACTTAAGGGCAGGGCAGACTTTAATAGAAGCTGCTACTAAACATAACATACCACGTTCAACATTATATATGCGGGCAAAAGCATTAGGAATACATTTGCATGCTGCAAGAAATGAATATCCGCCTGAGTGTATGAAGGCAGCAATAGAAGCTGTTGTTGGTGGCTCCAGTTTGCAAAGTGCATCTGAAATGTTCAGAATTCCAAAAACTGTATTGTGGAGGAGAATACAGAAGGAGGGATATCAAATATTGCGTTCTGAAATGAGGCGATCGTATCCTTCTGATAAACGTGAAGCCGCAGTAAAAGCATTGGAGAGAGGGGAGAATCTAACAAAAGTTGCACTCGAATTTAAAATTCCAAAGACCACCCTTTTTCGTGATAAAGCGCGCTTAGTAGATGAAGGAAAATTGCCGCTATCGTTTTGGAAGAAACGTAAAACTGAAAATGAAGAGTTAAAAAAGTCTAGATTGGAAGAGGCAGTGGCTGCGTGTAAAGGGGGAAAAATGTCTCAAGCTGCAGCGTCCATGGCATTTCATATACCGAAAACAACTATTTGGAGACGCCTTCAACAAGATGGCGTAAAAACTGAACGTGTATCCAGTTCAAAGAAGCAACAGCGAGTAAGTGAAACAAAGCCCAATAAAGAGGAGAAGCCTCAAGGAGATGCTGACTTTACCTATTGTGAGGTATCCTCAGAGATTCCAATAACTTATATCGACGAGAACAGTATACCTGAAGATTCTGTGATAATTTTAACAGCTGAGGACATGGATGAATTGAATCTGGAGGAGGGAAGACAAATAATCATAAATTCGgAGTCAGTGCAAGAGTATGTCCCGTGTGCCATAAGTATTGAAGAGACAGAGAATTATTCCCAAGCAGAAAGTTAG
- Protein Sequence
- MSEGTDQHEINESYCFKWNDYENHLSDVVKQLLQENCMVDVTLAVAGEHILAHRIVLCACSSLFREVLSNANEDHPTIIITDISPQDMRSIIEFAYNGEVKIPVENINSLLDAARSLKICGLLEIEDVDETALTLDSKDYTESGEEPMTVINETEESMTGTMKGEMVDDLEEIKYQAQCESSFNKRRKRRRDSGKRDYSDDMLASAIADLRAGQTLIEAATKHNIPRSTLYMRAKALGIHLHAARNEYPPECMKAAIEAVVGGSSLQSASEMFRIPKTVLWRRIQKEGYQILRSEMRRSYPSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMAFHIPKTTIWRRLQQDGVKTERVSSSKKQQRVSETKPNKEEKPQGDADFTYCEVSSEIPITYIDENSIPEDSVIILTAEDMDELNLEEGRQIIINSESVQEYVPCAISIEETENYSQAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00391210;
- 90% Identity
- iTF_00391210;
- 80% Identity
- iTF_00633738;