Ccet002227.1
Basic Information
- Insect
- Crossocerus cetratus
- Gene Symbol
- ttk
- Assembly
- GCA_963675795.1
- Location
- OY776662.1:21116578-21118757[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.2e-08 9e-05 22.2 0.1 2 38 199 235 198 241 0.85 2 4 1.1e-09 2.5e-06 27.2 0.0 2 39 249 285 248 292 0.86 3 4 0.085 1.8e+02 2.0 0.0 21 34 319 332 305 337 0.80 4 4 1.6e-11 3.5e-08 33.1 0.1 4 38 363 397 360 401 0.94
Sequence Information
- Coding Sequence
- ATGTCCGAGGGCACTGACCAACATGAAATTAACGAGAGCTATTGCTTTAAATGGAATGACTATGAAAACCACTTGTCCGATGTTGTTAAACAGCTACTGCACGAGAACTGCATGGTGGACGTTACCTTGGCTGTGGCTGGGGAGCGCATTCTTGCGCATCGTATTGTCCTCTGTGCTTGCAGCACTCTATTTCGAGAAGTCCTGAGTAACACGACTGAGGATCATCCGACAATTATAATAACCGACATATCGCCACAAGATATGAGATCTATCATAGAGTTTGCCTATAACGGTGAGGTGAAAATACCGGTCGAAAATATTAATAGCCTGCTGGATGCTGCCCGCTCCTTAAAGATATGTGGTTTGCTCGAGATCGAGGACGTTGATGAAACCGCCTTAACTTTGGATTCCAAAGATTATACTGACAGTGGCGATGAGCCGATGACTGTGATAAATGAAACAGAGGAAAATATTATGGGTGAGATGAAAGGCGAGATGGATGATTTGGAGGACACGAAATATGATGGCCAGTGTGAGAACTCATTTAATAAACGAAGGAAACGGAGGCGAGATAGCGGAAAACGAGATTACAGTGACGATATGTTAGCATCGGCAATTGCTGATTTGAGGGCAGGGCAGACTTTAATAGAAGCTGCTACTAAACATAACATACCGAGATCAACGTTATATATGCGTGCAAAAGCATTGGGTATACATTTGCATGCCGCAAGAAATGAATATCCACCCGAGTGCATGAAGGCAGCGATAGAAGCTGTTGTTGGGGGTTCCAGTTTGCAAAGTGCATCTGAAATGTTCCGAATTCCAAAGACAGTATTGTGGAGGAGAATACAGAAAGAAGGATATCAAATACTGCGTTCAGAAATGAGACGATCGTATCCTTCTGACAAACGTGAGGCTGCAGTTAAAGCATTGGAACGAGGGGAGAATCTGACGAAAGTTGCACTCGAATTTAAAATTCCGAAGACCACCCTCTTCCGCGATAAAGCACGTTTGGTAGACGAAGGAAAATTGCCGCTTTCCTTTTGGAAGAAACGTAAAACTGAAAATGAAGAGTTAAAGAAATCTCGATTGGAAGAGGCAGTGGCTGCGTGTAAAGGTGGAAAAATGTCGCAAGCTGCAGCATCCATGGCCTTCCATATACCAAAGACGACTATTTGGAGACGCCTTCAACAAGATGGCATAAAAACTGAACGTGTGTCTGGTTCGAAGAAGCAGCAGCGTGCATGCGAGACAAAGCCTAGTAAGGAGGAGAAATCTCAGGGAGATGCTGACTTTACCTATTGCGAGGTATCGTCAGAGATTCCGATAACTTACATCGACGAGAACAGTATACCTGAAGATTCTGTGATAATTTTGACAGCAGAGGACATGGATGAATTGAATctggaggaaggaaggcaaATTATCATAAATTCGGAATCAGTGCAAGAGTATGTCCCATGTGCCATAAGTATCGAGGAAACAGAGAATTATTCCCAAGCAGAAAGTTAG
- Protein Sequence
- MSEGTDQHEINESYCFKWNDYENHLSDVVKQLLHENCMVDVTLAVAGERILAHRIVLCACSTLFREVLSNTTEDHPTIIITDISPQDMRSIIEFAYNGEVKIPVENINSLLDAARSLKICGLLEIEDVDETALTLDSKDYTDSGDEPMTVINETEENIMGEMKGEMDDLEDTKYDGQCENSFNKRRKRRRDSGKRDYSDDMLASAIADLRAGQTLIEAATKHNIPRSTLYMRAKALGIHLHAARNEYPPECMKAAIEAVVGGSSLQSASEMFRIPKTVLWRRIQKEGYQILRSEMRRSYPSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMAFHIPKTTIWRRLQQDGIKTERVSGSKKQQRACETKPSKEEKSQGDADFTYCEVSSEIPITYIDENSIPEDSVIILTAEDMDELNLEEGRQIIINSESVQEYVPCAISIEETENYSQAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00391432; iTF_00633547; iTF_00633738;
- 90% Identity
- iTF_00391432; iTF_00633547; iTF_00633738;
- 80% Identity
- iTF_00391432;