Ecav003844.1
Basic Information
- Insect
- Ectemnius cavifrons
- Gene Symbol
- -
- Assembly
- GCA_964023945.1
- Location
- OZ030376.1:14497125-14500083[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.7e-13 1.1e-09 37.9 0.0 1 39 282 321 282 325 0.90 2 4 1.8e-12 3.3e-09 36.4 0.1 2 39 337 374 336 377 0.94 3 4 6.4e-19 1.2e-15 57.0 0.0 2 45 392 436 391 436 0.97 4 4 7.3e-19 1.4e-15 56.8 0.1 1 42 443 485 443 486 0.97
Sequence Information
- Coding Sequence
- ATGAAACTATATCCTTTGGAGCGGGGCTCACTTTTGAAAACGGCCGACCAACTGAAGATCAAGGGACTGTGCGAGGTACCGGAGAGTCGAGACGGTCCACCCTCCGTGAGTCTGAGTTCACCGCCAAGGGAACCAGGAACCCCTAGGTTAAATTTCACAAAATTGAAGAGGCACCATCCAAGATATAAGAGAGCCAGAACCACGTTCGAGCCACGTGCTACAGACTCACGGCACTACGATAGATACAAAGAAGAGGAATCAAACGAGAATTACAATCGTGAAAACAAAGAGAACCACAGGGACTGGCAGAACGAAGATGAAGAGTGCACAGAGGCAGCAGCAACAGTAGTCCTGGAAACTTGCCAgcgtaataacaataataacaacgGTAACGGTAcaaacaacaataacaacgGTGACATGTTCTGTCACACAGGCTTGGGCCACTATGGTCACCATCCAGATCCTGCAGAAGTGGATTTACCACCGGAGACCCAACCAACACCGCCAAGTGCCACCTTAGTCGGTACGACGATTACCCACTTAAGGGATCCGAATCATCATTCTACAGAAATCCAAGACTGTGACAGTGTCAAAATTAAGTTTGAGACGTTGCATACGATGGATTCCTCGGACACGATAGATATAGATAGCCACATGTCCGATCGAGCGAGTGTTGTTAGTTCAAAACACGCGGCCGACAGTGACAACATGATGATGATTACTCCGGAGTTACTGGGTTTAATGCCCTCTGGGAGTTCTGTGCATTCGGATTCTGGtgaaaataattcaaaagGTCATTCTGGACAATCCAGTTCGCATCATCACAGTTCGAAATCATGGACTCAAGAAGATATGGATGCCGCTTTAGAGGCACTCAGAAATCACGATATGAGTCTTACGAAAGCTTCGGCGACATTTGGCATTCCTTCTACAACATTATGGCAAAGAGCGCATCGATTAGGCATTGATACTCCAAAGAAAGATGGCCCTACAAAGTCATGGAGTGACGAGAGTCTAAACAACGCACTCGAAGCCCTTCGAACGGGAACTATATCGGCGAATAAAGCATCAAAGGCATTTGGTATACCTTCTAGTACATTATACAAAATTGCAAGAAGAGAAGGCATTAGATTGGCCGCGCCTTTCAATGCAAGTCCTACAACTTGGTCGCCGGCTGATCTCGATCGTGCTCTGGAGGCAATCAGATCAGGACAAACTTCTGTGCAACGAGCCTCCACAGAATTCGGAATTCCAACAGGGACTTTATATGGAAGATGTAAAAGAGAAGGAATTGAGCTTAGTCGAAGCAATCCAACACCATGGAGTGAGGATGCTATGACCGAAGCCCTCGAAGCTGTTAGATTAGGTCACATGAGTATTAATCAGGCCGCGATACATTACAATCTACCATACTCCTCCTTATACGGTCGTTTTAAAAGAGGGAAATATGAAGAGCCTGTAGTGGGAGATATGTCACAAGACGGTAGCAATCCACACTTCCATCAAAGTCCGAACCAAAATCATTCATCTGTTGTTCCCGATCAAATGCAATACCAAGGCAGCTGA
- Protein Sequence
- MKLYPLERGSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRLNFTKLKRHHPRYKRARTTFEPRATDSRHYDRYKEEESNENYNRENKENHRDWQNEDEECTEAAATVVLETCQRNNNNNNGNGTNNNNNGDMFCHTGLGHYGHHPDPAEVDLPPETQPTPPSATLVGTTITHLRDPNHHSTEIQDCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVVSSKHAADSDNMMMITPELLGLMPSGSSVHSDSGENNSKGHSGQSSSHHHSSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVGDMSQDGSNPHFHQSPNQNHSSVVPDQMQYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00391429;
- 80% Identity
- -