Basic Information

Gene Symbol
stc
Assembly
GCA_932527285.1
Location
CAKOBM010000021.1:1754398-1771477[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 2 2.2e+04 -4.5 1.6 15 19 691 695 690 695 0.81
2 13 0.14 1.6e+03 -0.5 0.6 4 10 724 730 723 730 0.93
3 13 4.3e-05 0.47 10.8 18.1 4 19 738 753 736 753 0.93
4 13 4.3e-06 0.046 14.0 11.2 1 18 789 806 789 807 0.91
5 13 9.8e-05 1.1 9.7 10.7 1 18 848 865 848 866 0.98
6 13 1.7e-06 0.019 15.3 9.8 1 19 907 929 907 929 0.88
7 13 0.018 1.9e+02 2.5 7.3 1 11 969 979 969 980 0.93
8 13 0.11 1.2e+03 -0.1 1.2 3 10 983 990 982 990 0.91
9 13 2.1e-08 0.00022 21.4 15.2 1 19 996 1014 996 1014 0.99
10 13 2 2.2e+04 -5.3 2.7 6 18 1043 1047 1042 1048 0.48
11 13 0.17 1.8e+03 -0.7 18.7 1 18 1053 1069 1053 1070 0.81
12 13 2.4e-07 0.0026 18.0 13.5 1 17 1106 1128 1106 1130 0.83
13 13 0.00059 6.4 7.2 3.6 1 12 1136 1146 1136 1148 0.96

Sequence Information

Coding Sequence
ATGTCGCAGTGGAACAACTCTTACGCTTACAACAACCAATATCAGCAAAGTCCTAGTGGCTGGGATGGTGACCCAAATAGCCAATACATAAATCAAGCCTATTACAGCAGGCCAGATGCCAATGGTCAATATGTGAATTTCAATGAGTTCCTAACACAGATGCAAACCAATAATATAGCCCCACAGGCCAATCCCAACAATTTTAACAATGCGACATTTGAGAACTATCCTCCAGGTCAGTATAACTATCAAAATGTGCCTTCATCATCTCAAACCCAACCCAACAATTACAACTATGGTCCTTCAAGCATGCCTGCCAAAAGCAATGCCGGTCCAGTGAATCCACAAAGCCAGTTTAATGCACAAACATCTGAGCCAACAACATATACAAAGAATATTGCTTTCAAGTCTAACCTTACAGCAACTGCAGTTGAATTTGTACCAAAAGGTAGTGCTTTGAAACCTTCCACAAGCAGCCAAAACATTCCAGAAACTTCCCATAGCTACAAAGAGGTAAATAATAGTGGTATTGAAGAACCAAGTACATATAGCAAATCATCAGACCGCAATTGGAGGCAGAAACCGCAGAGTTCAAACCTTAGCGGGAATGTGAAGAATAAGTCAGTGCCTAATGGACATGCTCAAGATAACTACAAAAGTTCTTCTCGTAACCGTGACACTGTTCAACGTAATAATGAAGCCAACGGAAGTCAGGATAATGGAACTCCAGAGTACAGTAATGAAGAACAAACTAATGTTAGCAAAAATGAGTCTGATAATAGAGTTAATGAAGTTAATAGTAAAGGCACAGATAAAAGTCACGAGACAAGTAGCCTGAGTCGAGAGCCACGTCAACGAAACTATGATTCTAATAACAGGAATGAATCACGGTCGAACAATAAAAATCAAGAACCTCGGTCAAATAATAAAAATCAAGAAACGCGTCAGTATAATGACAGAAACCAAGAAACGCGACAAAGGAACTACGATTCAAACAATAGAAACCGAGATTCTCGTCAAAATTATGATTCAAATGATCGAGGACAAGAATCAAGGGAATATGATTCAAGTCAGCGATATGATTCACGAAACGACCGTCGTAACCAACCTAAAGGCAACTCAAAACTTAAGGGAAAAGATGACAACAGGACATTTTACAATAGCACTATAAGCAAAGACAGCCAAGATGTTAGAAGCGGGAGGGGGGAAAGCTCTAAAGCAGAAGGCTCCAGGGGGGAGAATTATTCAAGAGCAGAGAACTCCAGAGGGGAGAATTATTCAAGACCAGAGGGTTCCAGGGGTGAGAACTATTCAAGAGCAGAAGGTTCCAGAGGTGATAACTATTCCAGAGCCGAAAGTTCTAGGGGGGAGAACTACTCAAGAGCAGAAAGTTCTAGGGGAGAGAACTATTCAAGAGCAGAGGGTTCTAGGGGAGAGAACTATTCAAGAGCAGAGGGTTCCAGAGGTGATAACTATTCAAGGGCAGAGGGTTCCAGAGGTGATAACTATTCAAAAGCAGAAAGTACTAGAGGGGACAACTATTCAAGAGCAGAAAGTTCTAGGGGGGAGAACTATTCAAGGGCCGAGGGTTCTGGAAGGGGTCAAAGAAATTGGGCTGGTACCCAACGTCCCCGCGGTGATCGCAATCAAGATGATGAGCAATATGCAAATAATTACTACCAGAAAGATGATAGGCCTGAAAGAATAGACAGGGATAGAGGTTATGAAAGAATAGACAGGGATAGGGGATTTGATAGGACAGAAAGAGACAGGGGATATGATAGAGATAGGGGCTACGATAAGCAAGACCGAGAGAGAGCTACTAAATCGAATCTCTCAAGCCCTGCAAAATTTAAAAGCAAACATCAGACTGATTTAGCTAACAAAGAGATGACGCAACGCGAACGTCTCACGGACCAGTTAGATAAAGGAGCGCTTGAATGTCTGGTTTGCTGCGATAGAGTGAGACAGACTGATCCGGTGTGGTCCTGCTCTAACTGTTACCATGTGCTGCATCTTAGGTGTATTAGAAAATGGGCAATGAGCAGTGTGATTGAGGGTAAATGGCGTTGTCCTGCGTGTCAAAACATAAGTAAGACGATCCCGACCGAGTACCGTTGTATGTGCGGGTCGACCCGCGCTCCGGACTGGCAGCGCGGCACTGCAGCGCACACTTGCGGCAAGGCATGCCGCAGAACTCGCACTTGTCCGCATCCGTGCACTCTACTGTGCCATCCGGGACCATGCCCGCCTTGTCAGGCTACTATCACCAAACAATGCGGCTGTGGCTCTGAAACGCGTTCGATAATGTGCAGTAGTAAGCTGCCTCAGATCTGCGGTCGAGTTTGTTCTCGTATCCTAAGCTGCAATGTACACTCGTGCGAAAAAGAATGCCATGAAGGAGATTGTGAGGAGTGCGACAAGACTGTTACGCAATCATGCTACTGCCCGGCCGCCACGGAGCGTACAGTCGCGTGCACCCGCGAGTCCGGCGCTCGCGCGCACTGGGAGTGCTCGCGCGCGTGCGGCCGCATCCTGCCGTGCGGCGCGCACGTGTGCCGCGCGGCGTGCCACGCGCCGCCCTGCGAGCCGTGCGCACTTCTGCCCGCGGCTGTACTTACCTGCCCCTGTGGGAAGATGCAGTTAGACAAGAACGCTCGCAAGGCTTGCGTGGATCCTATTCCTCTGTGCGGCAACATTTGTGCCAAGCCGCTAACGTGCGGCCCGGTCGGAGACAAACACTTCTGTAAACTTATCTGTCATGAAGGTGCCTGTCCCGTGTGCCCCGACAAAACCCTGCTTCAATGCCGGTGCGGACACTCGAGTCGAGAAGTTCCTTGCATAGATCTACCTGAAATGCTCAACAATGTGCTCTGTCAGAAGAAATGCAATAAGAAATTGTCGTGCGGGAGGCACCGCTGCCGCACCGCATGCTGCGCGGCGAGTTCGCATCGCTGCACCGTGACGTGCGCGCGCTCGCTGCCGTGCGGCTTGCATCGCTGCGACGAGTTCTGTCACACCGGACACTGTCCGCCTTGTCCGAGAGTCAGTTTCGATGAGTTGAGTTGTGAATGCGGCGCCGCAGTGACCTTGCCCCCCGTGGCGTGCGGCGCGCGGCCCCCCCCCTGCTCGCGCCCCTGCCCCCGCCCCCGCGCCTGCGGACACCCCCCGCACCACTCCTGTCATCCCGGGGAGTGTCCGCCATGTGTCGTGTTAACTGCTAAACGATGCTACGGAGCGCATGAGGAGCGAAAAACTATACCGTGTTCGCTAGAAGAGTTCTCGTGTGGTTTGCCGTGCGGCAAGCCTTTGCCGTGCGGAAAACATTCGTGCATCAAAATCTGTCACAAGGGACCATGCGATGGTGGCAAATGTACCCAGCCATGCACAGAGAAGCGTCCGGCCTGCGGTCACGCATGCAACGCGGCATGTCATTCCTCCGCGACAGGCGCCGGCGTCAATTGTCCCTCCTCTGCCCCGTGTCGCCTGCCAGTGCGCGCCACGTGTCCGTGCGGCCGGCGCGCCGCCGACAGACCCTGTGCCGACAACTCGAGGGATTATAACAAAATGATGAGTGCCTTAGCAGCAACGAAAATGCAAGAAGGTGGTGCCTTCGAGATCACCGAACAACGACCCGGCAATATGTTGAAAACTCTAGAATGCGACGACGAGTGCAGAGTCGAAGCCCGCACCCGGCAGATGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCGGCCAAACTCGCGCCGCGCTACTCCGAGCACGTGCGCACCACTGCGCTGAGGGAGCCCGCCTTCGCGCAGCAGATACACGACAAACTGACTGATCTTGTACAACTTGCTAAGAAGTCCAAACAACGAACGCGCGCGCATTCGTTCCCGTCTATGAACTGGCAGAAGCGTCAGTTCATTCACGAGTTGTGCGAACACTTCGGCTGCGAAAGCGTGGCGTACGACGCCGAGCCTAACAGAAATGTCGTCGCAACTGCTGATAAAGAAAAGTCGTGGCTGCCAGCGATGAGTGTGATGGAAGTGTTGGGTCGTGAGGCGGGCAAGCGAAGAGTTCCCGGGCCCGTGCTCCGAGCAACGCCGTCCGGACCGGCGGCCGCAGCTAACACAGCCAAATCTAGCAGTGGGTGGGCCACTTTGACTTCCAAAACTACAAACGCGTGGGGCGCGCGCAGCCAATCAAAACCGACGCCTCCCGAAGCTAAAATAGATTACTTCGACAACCCCCCGGATAACTAG
Protein Sequence
MSQWNNSYAYNNQYQQSPSGWDGDPNSQYINQAYYSRPDANGQYVNFNEFLTQMQTNNIAPQANPNNFNNATFENYPPGQYNYQNVPSSSQTQPNNYNYGPSSMPAKSNAGPVNPQSQFNAQTSEPTTYTKNIAFKSNLTATAVEFVPKGSALKPSTSSQNIPETSHSYKEVNNSGIEEPSTYSKSSDRNWRQKPQSSNLSGNVKNKSVPNGHAQDNYKSSSRNRDTVQRNNEANGSQDNGTPEYSNEEQTNVSKNESDNRVNEVNSKGTDKSHETSSLSREPRQRNYDSNNRNESRSNNKNQEPRSNNKNQETRQYNDRNQETRQRNYDSNNRNRDSRQNYDSNDRGQESREYDSSQRYDSRNDRRNQPKGNSKLKGKDDNRTFYNSTISKDSQDVRSGRGESSKAEGSRGENYSRAENSRGENYSRPEGSRGENYSRAEGSRGDNYSRAESSRGENYSRAESSRGENYSRAEGSRGENYSRAEGSRGDNYSRAEGSRGDNYSKAESTRGDNYSRAESSRGENYSRAEGSGRGQRNWAGTQRPRGDRNQDDEQYANNYYQKDDRPERIDRDRGYERIDRDRGFDRTERDRGYDRDRGYDKQDRERATKSNLSSPAKFKSKHQTDLANKEMTQRERLTDQLDKGALECLVCCDRVRQTDPVWSCSNCYHVLHLRCIRKWAMSSVIEGKWRCPACQNISKTIPTEYRCMCGSTRAPDWQRGTAAHTCGKACRRTRTCPHPCTLLCHPGPCPPCQATITKQCGCGSETRSIMCSSKLPQICGRVCSRILSCNVHSCEKECHEGDCEECDKTVTQSCYCPAATERTVACTRESGARAHWECSRACGRILPCGAHVCRAACHAPPCEPCALLPAAVLTCPCGKMQLDKNARKACVDPIPLCGNICAKPLTCGPVGDKHFCKLICHEGACPVCPDKTLLQCRCGHSSREVPCIDLPEMLNNVLCQKKCNKKLSCGRHRCRTACCAASSHRCTVTCARSLPCGLHRCDEFCHTGHCPPCPRVSFDELSCECGAAVTLPPVACGARPPPCSRPCPRPRACGHPPHHSCHPGECPPCVVLTAKRCYGAHEERKTIPCSLEEFSCGLPCGKPLPCGKHSCIKICHKGPCDGGKCTQPCTEKRPACGHACNAACHSSATGAGVNCPSSAPCRLPVRATCPCGRRAADRPCADNSRDYNKMMSALAATKMQEGGAFEITEQRPGNMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSEHVRTTALREPAFAQQIHDKLTDLVQLAKKSKQRTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVMEVLGREAGKRRVPGPVLRATPSGPAAAANTAKSSSGWATLTSKTTNAWGARSQSKPTPPEAKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00738025; iTF_00686891;
90% Identity
-
80% Identity
-