Esil014635.1
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- -
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000070.1:574030-577368[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.59 35 5.4 0.8 1 23 247 270 247 270 0.93 2 18 0.0054 0.32 11.8 1.3 1 23 275 298 275 298 0.97 3 18 0.82 48 4.9 1.4 2 23 302 323 301 323 0.94 4 18 0.00038 0.023 15.4 0.4 1 23 328 351 328 351 0.97 5 18 0.02 1.2 10.0 0.9 3 23 415 436 413 436 0.92 6 18 0.00031 0.019 15.7 1.3 1 23 442 465 442 465 0.94 7 18 0.013 0.78 10.6 0.4 2 20 469 487 468 489 0.94 8 18 0.041 2.5 9.0 0.1 1 23 497 520 497 520 0.95 9 18 0.0003 0.018 15.8 0.4 1 23 525 548 525 548 0.96 10 18 0.011 0.65 10.8 0.2 2 23 561 582 560 582 0.95 11 18 0.016 0.95 10.3 1.3 1 23 587 609 587 609 0.97 12 18 0.34 20 6.1 0.1 2 15 615 628 614 632 0.73 13 18 1.8e-05 0.0011 19.6 0.9 1 23 645 667 645 667 0.97 14 18 3.2 1.9e+02 3.1 1.9 3 23 673 693 672 693 0.87 15 18 0.0017 0.099 13.4 0.4 2 23 709 731 708 731 0.96 16 18 0.00033 0.02 15.6 1.3 1 23 737 759 737 759 0.99 17 18 0.00031 0.018 15.7 6.4 2 23 766 787 765 787 0.96 18 18 0.012 0.69 10.8 2.7 1 23 793 816 793 816 0.96
Sequence Information
- Coding Sequence
- ATGGATAACTCGAGTCTGAAAACCCAGGAGTTATTAAACGTAGACTGGCTGAAAACACGTATGAGAACGATTTGGACTTCGCCAAAGTACTGCGCCCTCTGTCTTGACTCTGATGCGGAGTACTATGCTCTAAGCATGGAGTTTTCTAGCAATGAGGAATCTACTACGAAGCCACTGAGAGAACTAGTCAACTATGTGTTTAATTTTGATATTGAAGACTACATACCAAGCAACTACATATGTATGCTATGTGCCGAGAAAACAATTCAAACATACATTTTTATAACACACACAAAGAAAACATTTCACATACTGAATAGCTGCATAAACGATATGAACTCCAAAGTAAATGATTTAGACAATACATTGAGTGAAGACACAACATATGAAGATTCTAATGTTATGATTGTCGTAGAATATGATCGGGAAACTAATGAGCTAATTAGTGAAATGACTTCTAGATATAACGCTATTCTAACTGAACTACCAAAAGTCTCAAAACGCACGCCCCCTAAACAAAACTCCAAACCAATAAGTGTGCAAACAGTTAAAAATAAAGAAAATAAACCACTGGTAATTGCTACACCAAGAATAATCAAATATCCAAGAACAAAAGAAGTGAGGAATATCAGCTTCGAAGAAAAGGTTGCAACTCCTAACGTAACATTGAGAGAAGGTAAAATAGTAATCGAGCCGTTGGTAACAAACAGTATCCCGTCCACACCAAGATTCAACACATATTCCTGCAATTCCTGTGCAGATATCTTCACAACTTACCGATCTTTAAAAGAACATGAAAAAGCTAAGCATAATTCCGTTATCTATAAATGCAGGTACTGTGTTAAAATCTACAACACACAGCAGTACTTAGATGTCCATTATTTGTCCTTACACAGAAAGTCTAGATGTAGATTCTGCAAAGAATTATTTGACTCGGATAAACTAAACAGCCACTTGAAGGAAATGCATAGTAAGTTTGTCTACGCTTGTTCTGACTGCACTTTAGTTTACTACAACTATGAACAGCTAGAAACTCATATAAAATCCAGTCACTCCAAGCATTTAGCTGCGTCAGACAAGAAACAGCAGTGCGTTATGTGCTTAAAGAATCTGAGAGACGGAGAAGTCTTCCAACACAAATGCAAGTTTTCCTGTCTAGAATGTTCTAAAATCCCATGTGTTCACTACAGCTACCTTATGTCATTCCGAGAGCAAATATTGAACCATTCTCCGATTATTCGCTGTATAGACTGCGATTACACCACTAAACGGAAGGAGCATCTGATCGGACATGTTAATCGAGAGCATTTGGACCATCATCCGTTCACCTGTGACATATGTGGCACCCAGTTTTACACAAAACTGTCTCTTAAAACACATGTATTACAATTCCATCAGGACTTAAAATGTCAGTACTGCGACTCGGAGTTTAAAAACATGAAGTTATTAAAAACGCACCGAGCAGCATGTAAACTTAGCACTCGTAAATATAACTGCGTTAAATGCGTAGCAGCTTTTGATACTTTAGCTGAGTTGGAAAAGCATAGCAATATCAATCACAGTGCGTTTGTATACCCATGCTCATTATGTAAGAAAGAGTTTCCAAACAATGTCAGTTTGGAGGAACACCATGCCAGAGTTCACAGCGGCATCCAATACAAGAAACGAAGGAAGATTATAGAATGCACGCTCTGTGACGTCACCTTCAAAAACCTTAAAGAAATGCTCGAGCACGAGAAAGAACATCCGAACGAGATGTTCCCCTGCAAAGCGTGTCCGAAGAGCTTTAACAACCTTAAAAAGATCTACGTTCACAAACAGAAGCACTATTCGCAGAGGATTAAGTGTCCGGGATGCGGGAAAACTGTTGCAGCGTCTTATTTCTTACAGCATAAAGCTGCATGTCCACTTCTAAAAACTAAAGGTTCTATGCACGTCTGCGAGGTATGCGGCAAATCTTTTCAGGCCCAATCGAGTCTTAGAACCCATCTCCAGCTCCACAATCAAAGCGAATCTTGTCTGCATTGCGGCAAGATGATCAAATCAACAGCTATGAAAAAGCATCTCGAACTAAAACATGAATCGTACGTGGTCTCAGATGACTCAAAAAATATGCAACTAATTAAATGTGAACAATGCGATTATGTGACGCGGAAGAAGGCGGATTTCGAGAATCATGTCAATAGAATCCATTTGAAGATCAAACCATACAGTTGCGATGTATGCAGTCTAGACTTTTGTGGTAAGTCTAGACTAGCAGAGCATATGAGAACGCATTCAACAGCCAACTCATGTTTTTGCTCGTACTGTGGCAAAAAGTTTGCTAACAAAGTGTGCTTAAAAATGCATGTCCGAAGACACACCGGAGAGAGCCCATACCAATGCAACATCTGCTTCGAGAGATTCCGGTCTTCAAGTATCATGAAGACTCACCGATTGAAAAAACACCAGGACAAAACCATAGCCTGTCCGTTATGTGACTCTATGTATCACATAGTCGCTGAAATGAGGTTTCATGTGAAAAAAGTTCATTGGAAAAGTCCTGAACCGTTTGATTATAAAAAGATAGTTCCGGAAGAACATCACCATTTGTTCCGGGATAGACGGCTGCAGAAACTTGGTGATGATTCTTTGGTGTCGGAGAGTGTTAAGTATAGTGATGTGGAGTATCTaataaataaataa
- Protein Sequence
- MDNSSLKTQELLNVDWLKTRMRTIWTSPKYCALCLDSDAEYYALSMEFSSNEESTTKPLRELVNYVFNFDIEDYIPSNYICMLCAEKTIQTYIFITHTKKTFHILNSCINDMNSKVNDLDNTLSEDTTYEDSNVMIVVEYDRETNELISEMTSRYNAILTELPKVSKRTPPKQNSKPISVQTVKNKENKPLVIATPRIIKYPRTKEVRNISFEEKVATPNVTLREGKIVIEPLVTNSIPSTPRFNTYSCNSCADIFTTYRSLKEHEKAKHNSVIYKCRYCVKIYNTQQYLDVHYLSLHRKSRCRFCKELFDSDKLNSHLKEMHSKFVYACSDCTLVYYNYEQLETHIKSSHSKHLAASDKKQQCVMCLKNLRDGEVFQHKCKFSCLECSKIPCVHYSYLMSFREQILNHSPIIRCIDCDYTTKRKEHLIGHVNREHLDHHPFTCDICGTQFYTKLSLKTHVLQFHQDLKCQYCDSEFKNMKLLKTHRAACKLSTRKYNCVKCVAAFDTLAELEKHSNINHSAFVYPCSLCKKEFPNNVSLEEHHARVHSGIQYKKRRKIIECTLCDVTFKNLKEMLEHEKEHPNEMFPCKACPKSFNNLKKIYVHKQKHYSQRIKCPGCGKTVAASYFLQHKAACPLLKTKGSMHVCEVCGKSFQAQSSLRTHLQLHNQSESCLHCGKMIKSTAMKKHLELKHESYVVSDDSKNMQLIKCEQCDYVTRKKADFENHVNRIHLKIKPYSCDVCSLDFCGKSRLAEHMRTHSTANSCFCSYCGKKFANKVCLKMHVRRHTGESPYQCNICFERFRSSSIMKTHRLKKHQDKTIACPLCDSMYHIVAEMRFHVKKVHWKSPEPFDYKKIVPEEHHHLFRDRRLQKLGDDSLVSESVKYSDVEYLINK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00737770; iTF_00686677;
- 90% Identity
- -
- 80% Identity
- -