Esil020962.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ecliptopera silaceata
Gene Symbol
L
Assembly
GCA_932527285.1
Location
CAKOBM010000245.1:550483-564960[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.6e-06 9.5e-05 22.9 1.7 1 23 86 108 86 108 0.99
2 16 0.68 40 5.2 5.8 1 23 114 136 114 136 0.97
3 16 9.1e-06 0.00054 20.5 4.1 1 23 142 164 142 164 0.99
4 16 2.8e-05 0.0017 19.0 0.1 1 23 170 192 170 192 0.98
5 16 2.4e-05 0.0014 19.2 0.1 2 23 208 230 207 230 0.95
6 16 3 1.8e+02 3.2 0.2 3 23 254 276 252 276 0.79
7 16 0.33 19 6.2 0.0 3 23 327 347 326 347 0.97
8 16 0.18 11 7.0 0.0 3 23 362 382 361 382 0.91
9 16 5e-05 0.003 18.2 0.6 1 23 390 413 390 413 0.94
10 16 0.035 2.1 9.2 0.1 1 23 418 441 418 441 0.92
11 16 0.0018 0.11 13.3 0.2 1 23 495 519 495 520 0.96
12 16 0.0011 0.064 14.0 0.0 2 23 575 596 574 596 0.96
13 16 0.18 11 7.0 0.0 1 23 604 626 604 626 0.97
14 16 0.94 56 4.7 0.3 1 23 730 752 730 752 0.94
15 16 0.0038 0.22 12.3 0.1 1 20 760 779 760 782 0.95
16 16 0.093 5.5 7.9 0.3 1 23 789 811 789 811 0.94

Sequence Information

Coding Sequence
ATGATCATGCTATTCAGGGGAAACAGCAGTAGGCTGGAACACCTCATAGAGAAGATACAAGCGAACAAGGAGAACCACGACGTTACCACTGACGATATTAAAGAGGCGCTGGGTAGTGTGGGCAGCGCGGCGGGCAGCTCCTGGCCGTCTTCGACGCCGGAGCCCTCGCCGTCGCCCGCCTCCACCCCCTCGGCAGACGCGGCCGACGCTGACGCCGAGCCTCCCTTCACCCTCGGAGCCACGGAGCACACTCCTTACCAGTGCCAGTTCTGCGACAAGGCCTTCCCGAGGCTGTCTTACCTCAAGAAACATGAACAGACGCATTCAGACCAAATGCCGTTTCGGTGTGAGTTTTGCTCACGCTTGTTCAAGCATAAGCGTTCTCGGGACCGGCACGTGAAACTGCACACCGGGGATCGGAAGTACCGCTGTGCGCACTGCGAGTCTGCTTTCTCGAGGAGTGACCATCTGAAAATCCACATGAAAACTCACGACAATCAGAAGCCCTTCCAATGCACAGTTTGCAACCGCGGCTACAATACTGCAGCGGCGCTGACGTCACACATGCAGGGCCATAAGCGCGATCGGGAGGGCAGGGAGCCTGACCGTCGTCGACCGATGCGGTGCTTGCGGTGCGGAGAAGCTTTCAGGAGACCTGATCTTCTTCAGGCTCACATGGCGAGTGCACACGGGGTTGACGCAGCAGCTTTGACTCCACCTCGTCGCGTGGCCTCTCAGCCACCCCCCACTCTACTCGCCTGCATGTATTGCACTCGCGACACCTTCACGAGCATGGAGCAATTGCAGTTACATGTCCGAGCCGCTCACTCCGCCTTGCTCAACGGAGAGACCATATCGGTCGACCAACCGGCTCCAACCGATCTAAGCCGACGAGCTTCAGATGACGCGCCGCCGGCTAAACGCCCACGTTCTGGATCCGGAACCCCTCAAACTACGCTATCTCCGAACACATTGTTATGTAACCAGTGTGACGCGGCGTTGCCAGACTTCGAAGCGTTCCGCGCTCATTTGAAGGGGCATTTAGAGGAAGGTGGAGAATTGACCAGAACTAGCCCAGCTCCATGCGTGCATTGCGGTGCTACGTTTGCTGACGCAGCGGCTTCGGAACGTCATCTGACTGCTCATTATTTGGCTGTTTCCTGTGAATACACTTGCCACAGCTGCGCTAGAAGCTTTCCGACTCCAGATGATCTACAGAAGCATCTGTTAGATCTGCACGCGCATCATCTGTATCGATGTTCTCTATGCAAAGAGATCTTCGACTCTAAAGTAGCGATTCAGGTCCATTTTGCTGTCGCTCATAGCGGTGAGAGCAAAGTTTGGGTTTGTCGTGGATGTGGGAGCGGGGCTGGAGCGTTGCGTTCGGAAGCAGAAGGAGTCGCCCATGTCAGAGCGCGGCATGGCGGGGCCAGGTGCTCCTGCGGCGCTTTGCTCGGAGGCCCGAGACTTCGCCCCCGCGCTTATCGGTGCCCCGTGCCGACTTGTTCTGATGCTTTTGCAGTCCAGTATTTGTTGGAACGGCATATGCAAGTTCATCATGCTATGGCTCAACAGGTGCTAAACGGCGAGCTGACCAGACCAAAACGCGTTGAAAACAACAACGGTACGGAGGCTGATGGTACCTGTTCCCCATGCATTACTACCGAGCCAACTATTCCTGTGAACGAGGAGCGAAGAAGGAAGAATGGTGCAGTAGCCTTGCAGTGTGCTTATTGCGGAGAAAGGGCCAGAAGTCGTGCGGAATTAGAAGCTCACACAAGGGCTCATTCTGGTGCCGCGGCAGCGAGACATAAGTGCCTCATTTGTGACGAGATTCTGCCGTCTGCTGCTGTATTGGCGGAACATAAACTGACACATTGCAAGGTGGTGGCAGGCGACACTTGCTCTAGGTGTCGAGCTCGTCTCCTCTCCGAAGAATCGTTCTTGAACCACATGGCGCGGCACCACCCAGCACTGCCCGCGCCCTGCGTGGTCTGTCGACAAACACTCGCGTCTGAAGCCGAGGCGAGGTTACACGCGCGCTTTCATCTACGCCCTAACGAGGATGAACAAAGATGTGCGATCTGCCTCCGAGCGCTGCCGGAAAGCGAGGCGGGAGAAGGCGCGCGCGCGTGCTCGGCGTGCTACGCGCGTCACGCCGCGCCGCGCGCCGCGCCCGCCGCCGACCACGACTGCCGGCTCTGTCGGCGCGCGCTCGGCTCCCCCACGCGGCTCCAAGCGCATCTCATCGAGCACACCTTCGCGGGCATCGGAGCTTTCACCTGCTACCTCTGCTCCGCTGTCTTCACGAGCGCTGCGGGGTTACAGCGCCATCTGCCGGAGCACTCCTCGGCTCCCCGCCCGTACGACTGCGGCCGCTGCGGAATTAAATTCTTCTTCCGCGCGGAGCTGGACAACCACGCGTTCGTGCATCTCGAGGAAGCTGAGATCGCCCAACGCGCGTTCTACGAAGCCTACGCCCGAGGAGCGGCCAGCGCGTGGGCAGCGCTAGCTCCGCCTGAACCTGCACACGTGACCACGCCGGCTCCGGAAGTGAAGCAGGAGTCGGAGATAAAGGAGGAGCGGAGTGATGAATACATTGAAGTGGCTTCGCCGCCGCCCGTTCCTCCAGCACCATCGCCACCCCCGGTGGTGAAACGAGAGAAAACTGATGAAGAGTAG
Protein Sequence
MIMLFRGNSSRLEHLIEKIQANKENHDVTTDDIKEALGSVGSAAGSSWPSSTPEPSPSPASTPSADAADADAEPPFTLGATEHTPYQCQFCDKAFPRLSYLKKHEQTHSDQMPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQGHKRDREGREPDRRRPMRCLRCGEAFRRPDLLQAHMASAHGVDAAALTPPRRVASQPPPTLLACMYCTRDTFTSMEQLQLHVRAAHSALLNGETISVDQPAPTDLSRRASDDAPPAKRPRSGSGTPQTTLSPNTLLCNQCDAALPDFEAFRAHLKGHLEEGGELTRTSPAPCVHCGATFADAAASERHLTAHYLAVSCEYTCHSCARSFPTPDDLQKHLLDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGESKVWVCRGCGSGAGALRSEAEGVAHVRARHGGARCSCGALLGGPRLRPRAYRCPVPTCSDAFAVQYLLERHMQVHHAMAQQVLNGELTRPKRVENNNGTEADGTCSPCITTEPTIPVNEERRRKNGAVALQCAYCGERARSRAELEAHTRAHSGAAAARHKCLICDEILPSAAVLAEHKLTHCKVVAGDTCSRCRARLLSEESFLNHMARHHPALPAPCVVCRQTLASEAEARLHARFHLRPNEDEQRCAICLRALPESEAGEGARACSACYARHAAPRAAPAADHDCRLCRRALGSPTRLQAHLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHSSAPRPYDCGRCGIKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAASAWAALAPPEPAHVTTPAPEVKQESEIKEERSDEYIEVASPPPVPPAPSPPPVVKREKTDEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00635642;
90% Identity
iTF_01429280;
80% Identity
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