Esil007588.1
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- -
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000037.1:464873-470253[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.6e-11 5.1e-08 32.8 0.0 4 41 168 206 165 209 0.89 2 4 1.3e-11 1e-08 35.0 0.1 2 39 220 257 219 260 0.93 3 4 1e-15 7.8e-13 48.2 0.1 2 45 275 319 274 319 0.96 4 4 2.9e-17 2.3e-14 53.1 0.0 1 43 326 369 326 371 0.95
Sequence Information
- Coding Sequence
- ATGTCCAGCTCTGGATGTGCTGCCGTAAAATGTGAGCCTCTGTCTGATGAAGAAGATGATGTCCCTCAGTTACTCCAGAACACGCCTCCGTCAGAATTCCACGCTCTCACTTCTGTTAAAGTAGAATCAGTCTACCACAATGACGAGGGGATCCCGACCTTGCTTCAACACTTACAGCGTGCTGAAGGGATGGAAGAACTAGCCCCGTTGGCACCAGCCGGGCCCGCCGCCACCCCGGTCTGCGTCAAACAAGAGCCTGTCGAGACTTCCGCCCTCAATCTGGAGACCTTGGAGCCTGCACCACATAACACGGGTTCGTTGTTGGAAAGACACATAGCGATACTGAGGTCATCTGAAGTGCTGGACTCTGCAAACTTCACGCCGCTGCTCTCGACGGTCAAGGATGAACCGTCTTCCGAGGGAGAACAGCAGCCGTTGAGTGCGGACGAGCTGGGCGAGGCGTGCGCGCCGCGCGCCGCGCACAAGGCGTGGTCGCACCGCGACATGGAGGACGCGCTCGATGCGCTGCGCCACCACAACATGAGCTTAACTAAAGCATCGTCTAAGTTCGGCATTCCGTCGACGACGCTGTGGCAGCGCGCGCACCGGCTGGGCATCCACACGCCGAAGAAGGAGGGCGGCGCCAAGTCGTGGCACGAGGGGGACCTGCGCGCCGCGCTGCACGCGCTGCGCGCCGGCCTCCTCTCCGCCAACAAGGCCAGCAAGGCCTACGGTATCCCGAGCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGCATCCGGCTCGCGGCGCCGTTCAACGCGGCTCCCGTGGCGTGGCGGCGCGGCGACCTGCAGCGCGCGCTCGCCGCCATCCGCGCGGGCCGCGCCTCCGTGCAGCGAGCGGCCTCGCAGTACGGGATACCCACCGGTACACTCTATGGGCGCTGTAAGCGAGAAGGCATAGAGTTGTCCCGCTCTAACCCCACGCCGTGGTCTGAAGACGCCATGGGAGAGGCGCTAGAAGCCGTCAGGATCGGTCAGATGTCAATAAACCAAGCTGCGATTCACTTCAACCTGCCGTATTCCTCGCTGTACGGAAGGTTCAAGCGGTGCAAGTACCAGATCCAGCCAATGCCGCATCAAGACATACAAATCCCACCAGAAAGTGTCCCGTATCAGCAGGAAATGAACTACTATCAGCATACGCCGATGTACCCCGATCACGAACCTTCCGTCCAGCATACATTACCCCATGAGTTGCTCCAGGATCCCTCGAATAGCAGCCAAGACCCGTACTCGCAGGCAATGTATTACAACCAAAACTTTAATAGCATAGCGACGAGCTGA
- Protein Sequence
- MSSSGCAAVKCEPLSDEEDDVPQLLQNTPPSEFHALTSVKVESVYHNDEGIPTLLQHLQRAEGMEELAPLAPAGPAATPVCVKQEPVETSALNLETLEPAPHNTGSLLERHIAILRSSEVLDSANFTPLLSTVKDEPSSEGEQQPLSADELGEACAPRAAHKAWSHRDMEDALDALRHHNMSLTKASSKFGIPSTTLWQRAHRLGIHTPKKEGGAKSWHEGDLRAALHALRAGLLSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRGDLQRALAAIRAGRASVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKYQIQPMPHQDIQIPPESVPYQQEMNYYQHTPMYPDHEPSVQHTLPHELLQDPSNSSQDPYSQAMYYNQNFNSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00737387;
- 90% Identity
- -
- 80% Identity
- -