Eara024576.1
Basic Information
- Insect
- Ecitomorpha arachnoides
- Gene Symbol
- lrrfip2
- Assembly
- GCA_027574945.2
- Location
- JAODGD020043888.1:963-3139[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-106 1.9e-102 343.1 29.8 1 300 83 381 83 381 0.90 2 2 0.031 3.9e+02 0.6 3.9 121 170 380 429 379 443 0.80
Sequence Information
- Coding Sequence
- ATGGACGCCAGTCGCCCGATAACAGGCCGCGCGGCGAACGCCGACGACGACGACGGGCGAATCTCTTCCGTGTCTTCGCGCGGCAGTGAACGCGCCGCGATGGGGCAGCACAATAGCCGTGCGCGCGACGAGGTTGCGCGCGAACAACAATTGGACGGCGGCCAGCGCGAGGGTATTTCCGACGCGGACGATAACGCTGACGACGATTTCGGATTCGCGCAGCATTTCGAGCGCGCGAGGGACGAAGCGGAGGCGAGACTGCTGGCGCGCCGCGCGGCGCGTGCGGAAGCCCGCGAGATCCGCATGCGAGACCTGGAGCGGCAGCAGCGCGAGCAGGAGGAGAACGCCGACCGACAGTTCGACATGCTCAGCGAGCCGGCGACGCGCCGCCCCATCGCCGCCGCCGCCGCCGTGCGCGGGCTGCTGCAGTCGCGCCGCTCCTCGGAGGACTCGCTGGAGGACGCCGGCGGTCTGCGCGATCTCAGACACGAGCTCAAGGAGGTCGAGGAGAAGTTCCGGAAGGCGATGATCGCCAACGCGCAGCTGGACAACGACAAAGCCGCGCAGACCTATCAGCTGGAGCTGCTCAAGGACAGGTTGGAAGAGCTGGAGGAGGAGCATTCGCAGGCGAGGCGCGAGCACCGAGACAAGTGTCGCGACTTCGAGCAACTGAAACGGGTGACGGCGCAGCTGAAGGACGAGCTGGCGCTGTTCAGGGCCGAATTGGACGAGCGCGATCGGCTGATCGCCGAGAAGGGCCTAGTCATCGTCGCCGCGGACGACACGGACGCCGGGGAGTGCCTGACGAACGGCCCGACGTCGAGCGCGTCCAGCCCCGTCGCGCCGAAGATACGGCGCGCGCTGGTCAGCGCCGAAAACGCGCATCTGCTGGAGAACGCCGGCGAGGGCAGTCTGGACGTGCGGCTGGCGCGCTTCGCCACCGAACGCTCGGAGCTGCTGGACCAGATCAGCCACCTGCAGCTCGAGCTGGAGGAGGAGAAGAGCGCCAAGCGGCGGCGGAGCAGCAACGCGTTGAACGGTCCTGATTCGGACAGCGACGCCGCCGACATTCAAAGAGAAGCGAGCAAGCAATTGGCCGAGTTTAAGTTTCGAGCGCAGAAGGCCGAGCAGGACGTCGCCACGATGCAGGCGACCGTGGCGCGGCTGGAGAGCCAAGTGATTCGCTACAAGTCCGCGGCGGAGATCTCCGAGAAGAGCGAAGAGGCGCTCAAGGCCGAGAAGCGCAAGCTGCAGCGAGAGGCGAGAGAAGCTCAGAGTAGAGCCGAAGAACTAGAAGTATCCAATACGCACCTCATCAAGCGCCTGGACAAGCTCAAAAACGCCAAGTCGGCACTGCTCAAGGAACTTTGA
- Protein Sequence
- MDASRPITGRAANADDDDGRISSVSSRGSERAAMGQHNSRARDEVAREQQLDGGQREGISDADDNADDDFGFAQHFERARDEAEARLLARRAARAEAREIRMRDLERQQREQEENADRQFDMLSEPATRRPIAAAAAVRGLLQSRRSSEDSLEDAGGLRDLRHELKEVEEKFRKAMIANAQLDNDKAAQTYQLELLKDRLEELEEEHSQARREHRDKCRDFEQLKRVTAQLKDELALFRAELDERDRLIAEKGLVIVAADDTDAGECLTNGPTSSASSPVAPKIRRALVSAENAHLLENAGEGSLDVRLARFATERSELLDQISHLQLELEEEKSAKRRRSSNALNGPDSDSDAADIQREASKQLAEFKFRAQKAEQDVATMQATVARLESQVIRYKSAAEISEKSEEALKAEKRKLQREAREAQSRAEELEVSNTHLIKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00022193; iTF_00632126;
- 90% Identity
- iTF_00632126;
- 80% Identity
- -