Eara024781.1
Basic Information
- Insect
- Ecitomorpha arachnoides
- Gene Symbol
- bab1
- Assembly
- GCA_027574945.2
- Location
- JAODGD020044328.1:4176-6063[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-15 1.5e-11 44.3 0.1 3 45 366 408 364 408 0.92
Sequence Information
- Coding Sequence
- ATGTACAGCAGCGCGCAGCACTACTGCCTGCGGTGGAACAACCACCGGTCGAACCTGCTGACCGTCTTCGACGAGCTGCTGCAGAACGAGGCGTTCACGGACGTGACGCTCGTCTGCGACGGCGGCGGTCCGATCAAGTGCCATCGGATGGTGCTCGCCGCCTGCTCGCCGTACTTTCAGAACCTGTTCACCGACCTGCCGTGCAAGCATCCGGTGGTCGTCCTGAAGGACGTGCGCCACGCGGACATCAAGGCCATCCTCGAGTACATGTATCGCGGCGAGGTGAACGTCGGCCAGCACCAGCTCGCCGACCTGCTGCGCGTCGCCGAGGCGCTGAAAGTCAAGGGGTTGGTGGAGGAGAAGCGTGGCGGCGACGCGAGCGACGTCGCGCGCACCGATTCCGACCACCCCAGCCCGACGGGCGTGAGCACGTCGAGCGCGTCGAACAACCAGTCGGCGGTGCACAGCAGCAGCGCCGAGTCGCCGCCGCATTCGACGAACGGCTTCGGCAGCGCCTACAAGGGCAACCCGTACGCGTATCAGGGCAGCCACAAGAAGGCCGCCACGTGCGGCATGGCGGCGCAGGGTCTGCCGTCGCCGAGGATGAATATTCCGATGTGGCCGGTGGCCGGCCTACCGATCCATCCGAGCCACTCTCCCAGCGAGCACGCCGGCGGCAACGCGGCGGCCTCCCAAGCCGCCGCCATGCTCGGCAACTGCTACCAGGCCGGAAACGCGGACGCCAACCCGCTCAAACGCAAGAAGCTGTCCGCGCTGCTCATGAGCCGCGACACGCCCATCCTGCGAACGGTGCTCGGACAAGCCGACTCTTCGCAGCCCGTCAGCCTCGTGTGCCATCCGGACGGCAGCCCAACTAATGTCAACTCCAATGGAGTCGAAGAGCTGCCCGAAAAGCACATCAAGAACGAGCCGTCCGAAGGCGCCCAGTCGCCCTACACGGACATCTCCATGGAGTACGACGACAAGTCCAAGCTGGGCATCAGCCCGGCCTACGGCGGCGGCCTGTCCGGCATCGCCACCTACGTGCCCAGCAACGTCAAGCCCGAGTGGAAGCGCTACAAGCAGTACACGCGGAACGACATCATGTCCGCCATCGACGCGGTGCGCAACGGGATGTCCGCCCTGCAGGCGGCGCGCAAGTACGGCGTGCCGTCGCGGACGCTGTACGACAAGGTCAAGAAGCTGGGCATCACGACGAGCCGCCCGTTCAAGCGCGGCGGCAACGGCACCAGCCTCGGCTTCCCCTACGGCATCAGCGGCACCAGCTCGCCGTTCGGCCTCGACGCCGACGAGCACGGCATCAACAACAACTCGAGCCTCCTGGAGGCCAGCAGCATCCTGCAGCACGCGCTGGACGCCCGCGACGACAAGGAGGCGCTCGCCGCCATGATCGCCGCGCACGCCGCCATGAGCGGACGCAACGCCAGCCCGAACAACAACAACTCCTCGGCGCGCGCCACCAGCCCGCTGCCGAACCACCTGAAGTACATGGGCCGCATCGGCAGCCTGCCGCCCTCGCCGGTCGTCGGCAGCGATCCCAACCACAGCGAGACGAACGGCAGCGGCAGCAGCGATCGCGAGCACGACCACGACGACCACGACCACAACCTCGACCGGGACGCGAGCGACCACGTCGAGGACCTCTCCGTCGGGCGCAAGCAGGTCATCATGCCGCCCATCAACATGTCCTCGATCCTCAAGAAGGAGGAGATGCTCAAAGAGACGCTCATGGAGGAAATGCGGCGCGAGGTGGCCGTCGACAACGCCGAATGA
- Protein Sequence
- MYSSAQHYCLRWNNHRSNLLTVFDELLQNEAFTDVTLVCDGGGPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVRHADIKAILEYMYRGEVNVGQHQLADLLRVAEALKVKGLVEEKRGGDASDVARTDSDHPSPTGVSTSSASNNQSAVHSSSAESPPHSTNGFGSAYKGNPYAYQGSHKKAATCGMAAQGLPSPRMNIPMWPVAGLPIHPSHSPSEHAGGNAAASQAAAMLGNCYQAGNADANPLKRKKLSALLMSRDTPILRTVLGQADSSQPVSLVCHPDGSPTNVNSNGVEELPEKHIKNEPSEGAQSPYTDISMEYDDKSKLGISPAYGGGLSGIATYVPSNVKPEWKRYKQYTRNDIMSAIDAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGGNGTSLGFPYGISGTSSPFGLDADEHGINNNSSLLEASSILQHALDARDDKEALAAMIAAHAAMSGRNASPNNNNSSARATSPLPNHLKYMGRIGSLPPSPVVGSDPNHSETNGSGSSDREHDHDDHDHNLDRDASDHVEDLSVGRKQVIMPPINMSSILKKEEMLKETLMEEMRREVAVDNAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629721;
- 90% Identity
- iTF_00631576;
- 80% Identity
- iTF_00631576;