Basic Information

Insect: Ecitomorpha arachnoides
Gene Symbol: bab1
Assembly: GCA_027574945.2
Location: JAODGD020027015.1:1885-7844[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.1e-13 7.5e-10 38.9 0.0 1 39 378 417 378 421 0.90

2 4 6e-13 2.2e-09 37.4 0.1 1 39 432 470 432 473 0.95

3 4 6.6e-19 2.4e-15 56.4 0.0 1 45 487 532 487 532 0.97

4 4 6.5e-17 2.4e-13 50.1 0.1 1 39 539 578 539 581 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.1e-13	7.5e-10	38.9	0.0	1	39	378	417	378	421	0.90
2	4	6e-13	2.2e-09	37.4	0.1	1	39	432	470	432	473	0.95
3	4	6.6e-19	2.4e-15	56.4	0.0	1	45	487	532	487	532	0.97
4	4	6.5e-17	2.4e-13	50.1	0.1	1	39	539	578	539	581	0.95

Sequence Information

Coding Sequence: ATGTCTGGCCAACATTACGTTCTGCGATGGAACAACTACCAGACGAACATGACATCGGTGTTTCACCAGCTGCTGCAGAACGAAGCGTTCGTCGATGTGACGCTCGCATGCAACGACTTATCGCTGAAAGCGCACAAAGTGGTGTTGTCCGCGTGCTCGTCGTTTTTTCAAAAACTGCTAATGGAAAATCCGTGCAAGCATCCAACGATCATAATGCCGCAGGACGTGTGCTACGCGGATCTGAAGTTTATCATTGAATTTGTTTACAAGGGCGAAATAGACGTGTCCCAGGCTCAATTGCAGTCGCTCCTGAAAACGGCAGACCAATTAAAAATCAAGGGGCTCTGCGATACGCCTGACGAGCAAGTGTACATTGGCAACACGTCGGGTCCGACCGTCGGTGGTGAATTTCCCAAGTTTCGACGTCTATCTTCGCCCAAACATCGCACCGACTATTTTGACAACAAAAAATCGAAAAGCAAGAAGAACGACAAAATCACCGTCCCCAGGGAATCCGATGCTGGTACTTCTGCTACAACTGCTACTGCCAATGACGACGACTTACAATTGCGCGCTGAACAGGCTAAAGAAGATGACAAAACATTGATTGCAAGAGATGATGATAAGGGAAGGAAGCGATTGAACGCGGAACAGAACATCCTTAACATGAGCAGTAATGCTCTGTTGACTGGTCAATTGCTATTTTCGCAATTCGGTGTGGATAATGAGGATTTTTCACCGGATCCACCGGCTCCTATGGCTATTCCCGTTGGCCACGTGGAAATGCAGGAACATTCGCCAACAAGGACCTTATTAACAAACTCGTCATTACATCGGACCGACTTAACACATAACCACATCAAACATCCCGAAATCAAGCGCGAAATAAAGTTTGAAACACTTCAATCCTCGTACACGGCCGAATCTCTCCTAGATATTGATAGTCACATGTCCGCGCACTCGATGGATAGTCACGACGGACAAGATCCAAGCAGTCACACGACGATGATGATAACACCCGAGTTAACCAGCTTAATGCCGCTCGGCGCCATCAGCGATCACAGCACGAAATCAAACGGGCATTCCGACCATTCTAGTAGTTCACGACAGGGCAGTGGACCCAAGACGTGGACGCAGGAAGACATGGAACGGGCCTTGGATGCTCTCAGGAATCATAATATGAGTTTGACTAAGGCATCTTCTACCTATGGTATTCCCTCAACCACTCTATGGCAGCGAGCCCATCGTCTTGGCATCGATACGCCGAAGAAGGAGGGACCCACGAAATCTTGGACTGAAGAAAGCTTAAATTGTGCGCTGGAAGCACTGCGAACAGGGACTATCTCTGCCAACAAAGCGAGCAAAGCCTACGGAATACCATCTAGTACATTGTACAAAATAGCGCGACGCGAAGGCATTCGATTGGCAGCCCCTTTCAATGCCGCTCCGACGACGTGGACTCCTGGCGATCTAGAGAAAGCGCTGGAGTCGATACGCTCCGGACAAACGTCGGTTCAAAGGGCGAGCACCGAGTATGGCATTCCAACTGGAACACTGTATGGCAGATGCAAACGCGAGGGCATTGAGTTGTCGCGATCGAATCCGACGCCCTGGTCAGAGGATGCGATGGGCGAAGCTTTGGAGGCAGTGCGACTAGGCCACATGTCAATCAATCAAGCCGCGATTCACTACAATCTTCCTTATTCGTCATTGTATGGCAGATTCAAGCGGGGTGCTAAATACGATTCGGACTCGTCAGATCTCAACGTGGACTCGCACTCGCAGCACGACGGGCAACCAATGATGCTCGACTATTCTAACTCGCATAATTCACAAGTACAATATCACAATCACACAAATAGCTGA
Protein Sequence: MSGQHYVLRWNNYQTNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSFFQKLLMENPCKHPTIIMPQDVCYADLKFIIEFVYKGEIDVSQAQLQSLLKTADQLKIKGLCDTPDEQVYIGNTSGPTVGGEFPKFRRLSSPKHRTDYFDNKKSKSKKNDKITVPRESDAGTSATTATANDDDLQLRAEQAKEDDKTLIARDDDKGRKRLNAEQNILNMSSNALLTGQLLFSQFGVDNEDFSPDPPAPMAIPVGHVEMQEHSPTRTLLTNSSLHRTDLTHNHIKHPEIKREIKFETLQSSYTAESLLDIDSHMSAHSMDSHDGQDPSSHTTMMITPELTSLMPLGAISDHSTKSNGHSDHSSSSRQGSGPKTWTQEDMERALDALRNHNMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNCALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPGDLEKALESIRSGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGAKYDSDSSDLNVDSHSQHDGQPMMLDYSNSHNSQVQYHNHTNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00902152;
90% Identity: iTF_00631584;
80% Identity: iTF_00631584;