Basic Information

Insect: Ecdyonurus torrentis
Gene Symbol: -
Assembly: GCA_949318235.1
Location: OX439132.1:11133991-11160290[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00057 0.04 14.7 4.1 1 23 233 255 233 255 0.97

2 11 1.8e-05 0.0012 19.5 1.5 1 23 261 283 261 283 0.98

3 11 0.00019 0.013 16.2 2.4 1 23 289 312 289 312 0.96

4 11 0.15 11 7.1 6.1 1 21 318 338 318 340 0.94

5 11 0.00018 0.012 16.3 1.9 1 23 346 368 346 368 0.99

6 11 3.6e-05 0.0025 18.5 1.2 1 23 374 396 374 396 0.98

7 11 0.00045 0.032 15.0 1.4 1 23 404 427 404 427 0.97

8 11 3.6e-05 0.0025 18.5 2.3 2 23 434 455 433 455 0.97

9 11 0.00013 0.0093 16.7 0.6 1 23 461 483 461 483 0.98

10 11 1.8e-06 0.00013 22.6 2.5 1 23 489 512 489 512 0.97

11 11 1.3e-08 9.1e-07 29.3 0.9 1 23 526 548 526 548 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00057	0.04	14.7	4.1	1	23	233	255	233	255	0.97
2	11	1.8e-05	0.0012	19.5	1.5	1	23	261	283	261	283	0.98
3	11	0.00019	0.013	16.2	2.4	1	23	289	312	289	312	0.96
4	11	0.15	11	7.1	6.1	1	21	318	338	318	340	0.94
5	11	0.00018	0.012	16.3	1.9	1	23	346	368	346	368	0.99
6	11	3.6e-05	0.0025	18.5	1.2	1	23	374	396	374	396	0.98
7	11	0.00045	0.032	15.0	1.4	1	23	404	427	404	427	0.97
8	11	3.6e-05	0.0025	18.5	2.3	2	23	434	455	433	455	0.97
9	11	0.00013	0.0093	16.7	0.6	1	23	461	483	461	483	0.98
10	11	1.8e-06	0.00013	22.6	2.5	1	23	489	512	489	512	0.97
11	11	1.3e-08	9.1e-07	29.3	0.9	1	23	526	548	526	548	0.97

Sequence Information

Coding Sequence: ATGAGTGgagtaaagaaaaaagaagaggTGGATGAGGATGCTGTTAGCGCAGGAAATGTGAAAATGGAGGGACAAGATGGAGAGACCATCACAGAAATACAAAACTATCTAGAAACTTTCAACAAGGAAATACAAGATGGTACCCAGACCACTGTACAGGCTGCACCTGCAGAGGGTACATATTTTGTGGACCAGTCAGGGCAGTATTACTACCAGGCCAGTGGAGATACCCAGCCTGTCATGACGGTAGTCACAGCTGAGGAGGGTGAGGACGGAGCTGGTGGTGAAGGCATCGCCATCTCCATCCCCGCTGGCATTGCAGGTGACGCAACGACAGACGGCTCTGGCGGAGAGGCTACTTTCATTGCCATGCAGTCTCAGGATGGACAGGAGGATGGAGGCATCACAACTCTTGAATCTTCAGAAGATGTAATCCTGAATGCTGGTGATGCCTACCAAACTGTTACAATTGTACCTAGTGAAGCTGGCTCAGGGGAAGTGAGTTACGTCTTGATTGTCCAACAACCAGATGATAAGGATGGAGAAAAGGGAGAGGGTGAAGGAGAAGACCAGGACTTAACTGTTTATGATTTTGATGAAGGAGAAGAAGGCATGCCTGTGgAGTCGGGAGAAGAGGATGATAAGACTAAGATAATCAAGATTATGCCAAAGAAATCTCAAACTGTAACCCAAGCTCACATgtgtaattattgtaattatacaagTCCAAAAAGGTACCTATTGTCCCGTCATATGAAGTCTCACTCTGAGGAACGTCCTCATAAATGCAGTGTATGTGAGCGTGGTTTCAAGACTTTAGCGTCGCTTCAGAACCATGTTAATACCCATACTGGTACCAAGCCTCATCGCTGCAAGTTCTGTGACAGTGCTTTCACCACCTCTGGTGAACTGGTACGTCACGTACGCTACAAGCACACGCATGAAAAACCTCATCACTGCACTGAATGTGAATATTCCAGTGTGGAGCTAAGCAAACTAAAACGACATATGAGATGTCATACCGGAGAAAGACCATACCAGTGTCCACATTGCACGTATGCCAGTCCTGATACATTCAAGCTAAAGCGCCATCTACGTATCCATACTGGCGAGAAGCCGTACGAGTGTGATGTTTGTCATGCTAGATTCACACAATCTAACAGCCTCAAGGCTCATAAATTGATACATACAGCTGGAGACAAGCCGATTTTTCAGTGTGAACTGTGTCCTACCACATGTGGTCGGAAAACTGATCTACGGATACATGTACAGAAATTACATACATCGGACAAGCCACTAAAATGTAAACGTTGCGGCAAATCTTTCCCTGATCGTTATACTTACaagGTCCACAACAAGACTCATGAGGGAGAAAAGTGTTTCAAGTGTGACTTGTGCCCATATGCATCTATCTCCCAGCGTCATCTAGAATCTCATATGTTGATTCATACAGACCAGAAACCTTATCAGTGTGACCAATGCGatcagtcATTCCGTCAAAAGCAGCTACTAAAGCGACATCAGAACTTGTATCACAACCCTAACTATGTGCCGCCACAGCCACGTGAGAAGACCCATGAGTGCCCTGAATGTGGTAAAGCTTTCCGTCATAAGGGTAATCTAATTCGCCACATGGCTATACATGACCCTGAATCTGCAGCACAAGAGAAAGCATTAGCACTTAAGATTGGACGTCAAAAGAAGATTCAGatCATTGACGGACAGCAAGTAGAGGTGATGCCTGGAGACTCGGAAGAGGAAGACGAAGACGAGgatgaagatgaagaagaaatGATGGCTGTTGAAGGCCAGGATGGACAGCAGTATGTCGTGCTTGAGGTCATCCAATTGCAGGATGGCGAGGGAGGTGAAGGACAAACTGCAGTAGCAGTAGTACAAGATGACGGAGCTATGATGGAACAAGTCCCAGATGACGTCCTTGCTCAGCAGGAGGCTGAAGATGAGGCACAAAGACTTCATACAATGAAAACTAGAAGATTATCAAGACGAGATGCTATTGCAATCAAGAAGAGGCTGGAGACTCAGAAAGATATGCAAAATTGCTTCGGATTTGATGATGAGGAAGATGATGACAATGATGGTGACGTGGGAGATGTAGATGCAAAGAATGCTATCAAACTTTTAGAAGCAATCAACGAGTAA
Protein Sequence: MSGVKKKEEVDEDAVSAGNVKMEGQDGETITEIQNYLETFNKEIQDGTQTTVQAAPAEGTYFVDQSGQYYYQASGDTQPVMTVVTAEEGEDGAGGEGIAISIPAGIAGDATTDGSGGEATFIAMQSQDGQEDGGITTLESSEDVILNAGDAYQTVTIVPSEAGSGEVSYVLIVQQPDDKDGEKGEGEGEDQDLTVYDFDEGEEGMPVESGEEDDKTKIIKIMPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYKHTHEKPHHCTECEYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDVCHARFTQSNSLKAHKLIHTAGDKPIFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKVHNKTHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPQPREKTHECPECGKAFRHKGNLIRHMAIHDPESAAQEKALALKIGRQKKIQIIDGQQVEVMPGDSEEEDEDEDEDEEEMMAVEGQDGQQYVVLEVIQLQDGEGGEGQTAVAVVQDDGAMMEQVPDDVLAQQEAEDEAQRLHTMKTRRLSRRDAIAIKKRLETQKDMQNCFGFDDEEDDDNDGDVGDVDAKNAIKLLEAINE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00651145; iTF_01348298;
90% Identity: -
80% Identity: -