Basic Information

Gene Symbol
snpc-4
Assembly
GCA_949318235.1
Location
OX439128.1:26244053-26252940[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.81 6.9e+02 0.8 0.3 2 18 155 171 154 172 0.89
2 7 1.2 9.9e+02 0.3 0.1 23 45 237 261 234 262 0.76
3 7 2.2e-11 1.9e-08 34.6 0.1 1 43 268 311 268 314 0.96
4 7 9.7e-11 8.2e-08 32.6 0.0 3 44 320 365 318 367 0.93
5 7 1e-06 0.00087 19.7 0.0 2 43 374 415 373 417 0.97
6 7 5e-10 4.2e-07 30.3 0.0 3 46 425 468 423 468 0.95
7 7 6.7 5.7e+03 -2.1 0.4 39 46 741 748 740 748 0.85

Sequence Information

Coding Sequence
ATGAGCTCAAGTGACGAAGATAGTAGTGACTCTCACTCAGTAATTTCCATCGATGATAGAAACGGTGAAACCACTGAAGAGGATAAAGATAGCGATTGCGTATTTCTGAGCGATGAGGAGGATGTGATAGATAAAGACATATTAAAGTTATTGAGAGCCATAGAACAACCGGATGAAGAGCCCAATGAAGTGTACGTGGATGATAAGCCAGTGACGGATGTCAATGCTACCTTGCTATCTTGTATGGAActaaacaaagaaaaacaaaaactcGTTAAAGTACAGCAATTGTTAGATCGTGACAACCATCATCCAGCAAGTAATTGGTGGGGAAAAGATCATACTGGTCGTTTTGACAAGCCATACTTCAAGGATAAGCGTCTTTTCCCTCCTCCTCAAAATCAGGATACTATCACAAAGTTACGTAGAGGAGAGCTGGATATTGCTACAATTTTGAAGCAAAATAAATgGCAACAGTGGGAAATGAAGTTACTAGATGATGCAGTTCATAAAAACGCTTATGAAATTTTAGTGGCTCCACTAAATGCTCGCAAAGAACGCTGGGAGGATGAATTATTACTGAAATCAAAACTAAATCAAGACACTTCTGAACTAAAAGAAAAACTGGCTAAACTACAGGAAGAAATCAAAGAAATTACCGGAGATCCGTTGTTTGAAGTACTCTCTGATCCCGAAGCTAAAATTGATTGGATGAAAATCTCAGCAACTGatTTTGATGGCCGTCGCTCAGCATCAGAATGCCGTGGCATGTGGCGTATGTGTTTGATGGTAGGAGTTCATCGTAAACCCTGGACAAAGGAAGAAACTGATCATCTTATGAATGTTGTACGTTGCCATGACTTTGCTGGGTGGGAGAGTATTGCTGAGGAAGTAGGTGGTCGTACCAGCTACCAGTGTTTCCTGCACTGTCAAGTCATTATGAACAAAGAACGTTTCAAGTGGACAGTGACTGAAGACCGCAAACTCAAGTACCTTGTAAACAAGTTTACGCAAGGAAAAAAGATTCCGTTTACTATGATTGCTAGGTATATGCCAGGACGCACTGCTACTAGTATTCGTCAGCGTTGGCGTGACTCTTTAGACCCCTCAATTCGAACAGGCAAATTCACTGTGAGAGAAGATCTGATTCTGGCGACTGCTCGACATATTCATGACATGTCATATGAGCAAATTACGGCTCTCCTGCCTGGTCGCACTGGACAGCAGTTACGTGCGCGCTACCGTTGTCTTGAGAACATTCACCCTACTACACCCTTCACACCAGAAGAAGACAAACGGCTGGTAAGTTTGGCACAGAAAAATGATACAAACTGGTCATCACTTGTGAAAGAATTTCCTATGAGAACTCGTGGACAATTGCGAGGCCGCTACATGCGCTTGCTGAAAAATGCAAAGATTAGTTCAAGAATGACTGCTAAATTTTCAATCAGGAAATCTGAGGTTTGGGAGACACTAAAAGACAAAATTGTTAACCAGAAAGCTCTAAATCCAGAAGGTAATGATGACGATACTGTACTGTGTATGGTAAAAAAACCTTTCAAACCTATCGGTCGCAAGTTCAAACACAGAGATAGGTTTGATAGAGAGATCTCGCAGATCTACCGCTCCCACTATGCTCAGCCTAAGGGACGTAAGAAGAAGCATTATACAAGCACTGACATCACGTTGATTGGAGAAAAAGGACGCCAGATTGCTGATGTTCTCAAAGCAAATGTAAATTGGGCTCCTCTACGAGAAAACGAATTTCAAGAGGATAGTCAGTATCACTTGTATTCCGAGCTTCGCAAATTCAACGAGAACAGTGGCTGGGATCCAAACGGAACATCGCTCACTCACTGCATTGCTCCTAATGTAGCTACGATTGTGGGACTGCGTACACTGCTACTGGTGGAACCATTCTTACTGCGATGGAGCTTTGAATCTAATCTGAGTGAAAAGAAAGAGGTGGTGCATAAGGCATCAAAGTGTGGTAGCAATTGTCAGCAGCTCAACTTTGAGCAGGCGTGCGAACTCTTCAAGAAACGGTGTCTGGCGCTCTTCCTCTGGCCAATGTTTTTGTCTCAACAAGGgCCTCCTCGCACTGGGGATATTTTCTGTGACAAAGAACCAGACGTAATTGAAAATCCAAGTGATGAAGAGGAAGTCAAGAGTCCTGTCAGCAAACAGAAGATGACGAAGAGTGAGCGCAAACGTTGGCTGAAAGCTCGCTGGCAAAAATATCGTGAGGAGAAGGATGAAATGGTGCAAACAGCAGAGGCAGGTACTTCTGGCACTCAGGCCACACCACAAGTGATGCAGGGCAGACCTGGTCGCAAGAAGAAAGAGAAACCAAATGTCCCTGCAGTGGTCAAGCCCAAAGGCAAGCCTGGACGTAAGCGTAAGCAGCCTGTTGAAGTACCACCAGAACAAGGCCCAGAAGCAAAGAAAGACAAATATAGTACAAGAAACAAACAGGGCAAACATGTGCCCAACAAATGTTAA
Protein Sequence
MSSSDEDSSDSHSVISIDDRNGETTEEDKDSDCVFLSDEEDVIDKDILKLLRAIEQPDEEPNEVYVDDKPVTDVNATLLSCMELNKEKQKLVKVQQLLDRDNHHPASNWWGKDHTGRFDKPYFKDKRLFPPPQNQDTITKLRRGELDIATILKQNKWQQWEMKLLDDAVHKNAYEILVAPLNARKERWEDELLLKSKLNQDTSELKEKLAKLQEEIKEITGDPLFEVLSDPEAKIDWMKISATDFDGRRSASECRGMWRMCLMVGVHRKPWTKEETDHLMNVVRCHDFAGWESIAEEVGGRTSYQCFLHCQVIMNKERFKWTVTEDRKLKYLVNKFTQGKKIPFTMIARYMPGRTATSIRQRWRDSLDPSIRTGKFTVREDLILATARHIHDMSYEQITALLPGRTGQQLRARYRCLENIHPTTPFTPEEDKRLVSLAQKNDTNWSSLVKEFPMRTRGQLRGRYMRLLKNAKISSRMTAKFSIRKSEVWETLKDKIVNQKALNPEGNDDDTVLCMVKKPFKPIGRKFKHRDRFDREISQIYRSHYAQPKGRKKKHYTSTDITLIGEKGRQIADVLKANVNWAPLRENEFQEDSQYHLYSELRKFNENSGWDPNGTSLTHCIAPNVATIVGLRTLLLVEPFLLRWSFESNLSEKKEVVHKASKCGSNCQQLNFEQACELFKKRCLALFLWPMFLSQQGPPRTGDIFCDKEPDVIENPSDEEEVKSPVSKQKMTKSERKRWLKARWQKYREEKDEMVQTAEAGTSGTQATPQVMQGRPGRKKKEKPNVPAVVKPKGKPGRKRKQPVEVPPEQGPEAKKDKYSTRNKQGKHVPNKC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00630434;
90% Identity
-
80% Identity
-