Etor003306.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- bab1_2
- Assembly
- GCA_949318235.1
- Location
- OX439128.1:2330695-2333613[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-14 3.5e-11 43.0 0.0 3 45 376 418 374 418 0.92
Sequence Information
- Coding Sequence
- ATGGGGAGTGCATCACAACAATACTGTTTACGTTGGAACAACCATCGTACCAACTTATTAACAGTATTTGATCAACTACTCCAAAATGAAGCTTTTACAGATGTGACATTAGCTTGTGACAATGCTACCATCAAATGTCATAAGATGGTATTGGCTGCGTGCTCTACATATTTTCAAACCCTCTTTCTTGAGGTCTCGTGTTCACATCCTGTGGTGGTCCTCAAAGATATTCGATATACAGACATGAAGGCAATCCTCGAGTACATGTACCGAGGAGAGGTTAATGTAGCACAAGATCAATTAGCCAGTCTATTAAAAGTTGCTGAAGCACTGAAAGTTAAAGGCCTTGTTGAAGAGAATGGTCAGTCAGCAACGACACAAACTGGGAATGGAAATCCTGCTCCCCCACCCCCCTGTCCACCCTCACCTCCTACAATTAGCACGTCTGCTAATATTTCCTCTCTACCTCCACACATGTCTCCACCTCATTCTGCTGGTCTCATGAATCCTTTTTCCAAGTCTTACATGTACAGCAAGTCTGCAATGCTTGGCGGTGCCGCTGCGGCTGCTGCTGCTGCAGAGCGAGCTCGACTTGGGTCTCTGCCTATGTGGGCCATGCCAGGATTACCCCCTGGCCTACCTCCTCTACCTCCTCACTCTCTGAGTAGTAGTTATGACTCAAGAGATCTCTCACCTTTGAAAAGGAAGAAACTATCAAGTTTACTAAGCTGTCGTGACACTCCAATTCTGAGAACAGTATTGGGACAAAGTTTGACAAATCCACCTTCTGGAAGTGGCGGCAGCTCTGTTTCACCCCCAGGTAGCAGTCATTCACCAGCTGCAGATTCCTCTCAGCAGCCAGTCTCTCTTGTGTGCCATCCTGAACGTGCCCAGTCTAATGGATCAGCCCATAGCCTCATGAAGGGAATGAAAGGAGAACCCATGGGTGATGATGACCATTCTTCAATGTACAATGACACCAACCTCGATGACGACATGAGCGACCACGGAAAAATGATGCTCCCAGGCTCTACTCATCCTACCTACTCTGGAGActtaaaaggaATTGCAACCTACGTGCCACAACAAAAGCCTGAGTGGAAACGATACAAGCAGTACACACGAAATGACATTATGTCTGCAATTGATGCTGTTCGCAACGGAATGAGTGCTCTACAAGCTGCCCGAAAATTTGGAGTACCATCTAGGACACTATATGATAAGGTAAAGAAGTTAGGTATAACTACAAGCCGTCCATTCAAACGAGGGAGCTTTCCATTTGGTCTCGGAGGAAACAGTAATGAAGCATTATCATCTGGATTAAATCATTCAGGCAGCTTCTGTAGCCAATCAGAAGGAGAGGAACATGCATCACCTGATCATCACATAAGTAAATCAGACGATAGAGACGAAGGAACTGCTGCTAGTGTACTTGTTAGAGCAAGTCCTTGTAGAACACCACCAAGTCCGGGGGCTTTATTAGCTGCCCAAGGCCATTTCTTAAGTGATGACAGACATGCACGACATTATCATCGTAGTAGCAGTAGTCCAAGTCCGACAGCTAGCAGCAATCATAGTCACGATGAAGTGGAGGATCTATCTGTATCAAGAAAACCTTTAGCTCCTCCGCCCTCGCCACCCACACCTGTAGCAATGCCTCTAACACCGCTACATCCGCATATTGTGTCTTTGAAGGACGAACATCGTAGTTCAGTCCTTGATGAGCCAGTACGGACAGCTGCAGTGGCAGGCGGGGGAGGAGATCCAGAACATGATTAA
- Protein Sequence
- MGSASQQYCLRWNNHRTNLLTVFDQLLQNEAFTDVTLACDNATIKCHKMVLAACSTYFQTLFLEVSCSHPVVVLKDIRYTDMKAILEYMYRGEVNVAQDQLASLLKVAEALKVKGLVEENGQSATTQTGNGNPAPPPPCPPSPPTISTSANISSLPPHMSPPHSAGLMNPFSKSYMYSKSAMLGGAAAAAAAAERARLGSLPMWAMPGLPPGLPPLPPHSLSSSYDSRDLSPLKRKKLSSLLSCRDTPILRTVLGQSLTNPPSGSGGSSVSPPGSSHSPAADSSQQPVSLVCHPERAQSNGSAHSLMKGMKGEPMGDDDHSSMYNDTNLDDDMSDHGKMMLPGSTHPTYSGDLKGIATYVPQQKPEWKRYKQYTRNDIMSAIDAVRNGMSALQAARKFGVPSRTLYDKVKKLGITTSRPFKRGSFPFGLGGNSNEALSSGLNHSGSFCSQSEGEEHASPDHHISKSDDRDEGTAASVLVRASPCRTPPSPGALLAAQGHFLSDDRHARHYHRSSSSPSPTASSNHSHDEVEDLSVSRKPLAPPPSPPTPVAMPLTPLHPHIVSLKDEHRSSVLDEPVRTAAVAGGGGDPEHD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00630677; iTF_00650810; iTF_00651029; iTF_01347931; iTF_01348135;
- 90% Identity
- iTF_00630677;
- 80% Identity
- iTF_00630677;