Etor013576.1
Basic Information
- Insect
- Ecdyonurus torrentis
- Gene Symbol
- lov
- Assembly
- GCA_949318235.1
- Location
- OX439132.1:17442009-17445931[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.23 4.1e+02 1.1 0.0 10 23 83 100 82 101 0.79 2 3 2.6 4.5e+03 -2.2 0.5 8 24 107 131 103 132 0.64 3 3 2e-18 3.5e-15 55.7 0.0 1 44 463 506 463 507 0.96
Sequence Information
- Coding Sequence
- ATGGCAGGAGAAGGTCCAGGCTACAGTCTACGCTGGAATAATCACCAGCATCACATTCTCAATGCATTCGATGCTTTGCTGCAGGACGAGGCGTTAGTTGACGTCACCCTTGTCTGCGAGGACGGACGAGTGCGCGCGCATAAAGTTGTACTTTCAGCTTGTAGTCCGTACTTCCAGCGCATATTCTCAGAGACACCATGCAAGCATCCGGTGATCGTGCTGAAAGATTTGAGAGGGTGGGAAGTGCAGGCAATCGTTGACTTTATGTACAAGGGGGAAATCAGTGTGAGCCAGGCGCAACTTTCATCCCTAATCAGGGCCGCAGAATCACTTcagGTGCGAGGTCTGGCTCACATGGAAAAGGAACAAATGAGCTCTTCGTCCGCAGCCTCCATGACCTCTCGGACCACGAGAATGGAAGCTCCTGGTTCACCTCCAGTTGTATCCTCAGCTCCACTCTCCTCCACCAGACCTTACTCTCCAGCGCCCAGCCTGGAGAAACTGGGACATTATCCTGGATCAGGTTCTAGGGGAACAGAAAATGGACCACTTCTCCTCTCCTCACCTTTCTCTCCATCCCCCGCACCCCACTTTGAACCATCTCCGATCAAACATTACAATCGACATGACAATGCAAGTCCACCACTACATTGTAGAGACCCACACAGGTCTTCTCCATTGCCAAGGAGAAAACAGGCAAGGCCACGACGTAGGTCAGGAGAACTGAGTGCCCATGATTTATCCAAGAGCTCTGCAACATCATCACCTGCATCATCTCCTTCAGACATTCCAGAAAACTTATGTGTCAAGAAGCCACATCTCATTGACGACTCTCCACCACCGCTTGGCCAATCAGTTACACCTCAATCACCACATCCACTCTCTTCTATAGCCCCTCCACCACCTTCTTTCTCACCTCATCCTCCTTCTCAACCCTCCTCTGCTCCCTCACTGCCTCACTCTCCTAACACTGCTGAGCCTCCAGAGAGTCCCATGACTCCCTCCAGCAATGACCTGCCTCATAAAGCACCGTCGTCACTGCCAGCTGACTTGACCCCAGGAGAGAGGCTGCTTGACTTTTCTATGAATGGTTCTCCAGCTCCGCATCCTCCTCCGCTTGGACTGACGCACCCAGACCCTCCTCTGGATGCTACTGGGTTTCCATTGCTGCCCTCAGTCTCTGCACTCTCATTAACACCACCCCATGTATTTTCCATGGAATCAGCACATTTAGgACTTTTCCCACCCATGGATGGATGTAGGAATCCACTGCTGAATGACTTACACCATGAACCAAGGAGTGACAATCATATTATGGgcaaaagaaaatTGGGACGTCCCAAAGGTCAACACAGTGCACCCCGAGGAGGCCCTCCTAGATCATGGACAAATGCAGAACTGACGGAAGCTTTACAACATGTGTGGAACAAAAAAATGACCACATCCCAAGCATCAAGAATATTTGGTATTCCATATAATAGTCTTTTAATGTATGTTAGAGGAAAATATggtaaatctttaaaattagaACAACTGAAGAAAGACTGTTTAGTGGGATCTGAAATGTTGGCTGCTCCAAATCCAAATTCAGGTggacatcatcatcatcattcaAGTGGAAGAGGAGGAAGTGATAAAAATTCAGATGAATTAAGTATTTCAAGTACAGGACATGAAACAGATTTAGGATTTAAtccatatgcaaatttttattcagATTTTGCATTTCCAATACCTGTTAGTATGATTCATTTATTACCTCAATCAGAAAAAAATCGTGAATATTCTGATGATGATAGAAGAGAGAAGGATGATGATGATAATTCATCAATTCATGATGAAACAGAAAGAAAACCAACGCAcaatggacaaaaataa
- Protein Sequence
- MAGEGPGYSLRWNNHQHHILNAFDALLQDEALVDVTLVCEDGRVRAHKVVLSACSPYFQRIFSETPCKHPVIVLKDLRGWEVQAIVDFMYKGEISVSQAQLSSLIRAAESLQVRGLAHMEKEQMSSSSAASMTSRTTRMEAPGSPPVVSSAPLSSTRPYSPAPSLEKLGHYPGSGSRGTENGPLLLSSPFSPSPAPHFEPSPIKHYNRHDNASPPLHCRDPHRSSPLPRRKQARPRRRSGELSAHDLSKSSATSSPASSPSDIPENLCVKKPHLIDDSPPPLGQSVTPQSPHPLSSIAPPPPSFSPHPPSQPSSAPSLPHSPNTAEPPESPMTPSSNDLPHKAPSSLPADLTPGERLLDFSMNGSPAPHPPPLGLTHPDPPLDATGFPLLPSVSALSLTPPHVFSMESAHLGLFPPMDGCRNPLLNDLHHEPRSDNHIMGKRKLGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKDCLVGSEMLAAPNPNSGGHHHHHSSGRGGSDKNSDELSISSTGHETDLGFNPYANFYSDFAFPIPVSMIHLLPQSEKNREYSDDDRREKDDDDNSSIHDETERKPTHNGQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00630700; iTF_01348158; iTF_01347928;
- 90% Identity
- iTF_00630700;
- 80% Identity
- iTF_00630700;