Eden000509.1
Basic Information
- Insect
- Earota dentata
- Gene Symbol
- retn
- Assembly
- GCA_027574905.2
- Location
- JAODGB020001306.1:5211-7113[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-21 1.2e-17 64.3 0.0 4 89 33 116 31 116 0.93 2 2 3.2 1.1e+04 -3.0 0.0 26 38 255 267 214 268 0.62
Sequence Information
- Coding Sequence
- ATGAAAAGGCGCATTCTTTTCGCCTCGaatcataaaaatcacttGCTGATCAAAGGGGATTCTCAGCCGTCACAGACTCACAACAAACTCCCTGCGTCCTATGTAGCAACATTGTCGCGGTGCACGTTAACATCTGGTACACCCATCAACAGATTGCCGATTATGGCGAAATCAGTATTAGATCTCTACGAATTGTACAACTTGGtgatcgcgcgcggcggattaGTGGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGCCTGCATTTACCCTCCTCCATCACGTCGGCGGCTTTCACGCTTCGCACACAatacatgaaatatttatatcccTACGAGTGCGAGAAGCGTCGCTTGAGCACGCCCGCCGAATTGCAGGCGGCCATCGATGGCAACCGGCGCGAAGGACGCCGCAGCAGTTACGGCCAGTATGAGTCCGTGCAGCGATCTCCGAATCCGTCGCAAATGTCGCCGTTGTCACTGGTctcgcagcagcagcacctaGCCGCGCGCATGACCTCGGTGATGAGCGGCGGCATCGGTCTGCACAATGGCGCCCATCATCCCAGCCATCCCACGCCTTTGGGACAGCCGCTGAGCGCCGGTCCGCTGCCCGGCTTGGCGCCCAGCGAGTTCGAGGCGAGGATGATGGAGTACGTCAAGCTGCTGAACAAGGAAATCAGAAGTTCGGCGTCGACGCCGCCCAGGCAGGGCGATCtctcgccgccgagcgccacATCGCCGCTGAATCCCATCGAAATGTCGCGGATGACGCTGTGGAACTTGTACAACAACAATCAGCCACCATTGGAGCCGCAGAAGGAGGCGCTGAACTTGTCCGACGCCTCGCCGCCGATGGTCAAGCGCGAGCCGGAGCACAGAGATTCGCCACCACCAGCAAAGAAGTTCATTAAAGACGACAACGATCATCCTGTTAAGATGATGGCGCCGAGtacaaacatcaaaattaataGCCGAGGAGATGCCCGCAATGGCGATAATTCGTTAGTAGTAAGTATGGAACTGAATGGCGTGACATACCAAGGAGTTCTCTTCGCACAAGCCACCTCAGCGCAGAATAACACGAGCGCGGGCCGAACGCTGGTGGCGTAG
- Protein Sequence
- MKRRILFASNHKNHLLIKGDSQPSQTHNKLPASYVATLSRCTLTSGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYESVQRSPNPSQMSPLSLVSQQQHLAARMTSVMSGGIGLHNGAHHPSHPTPLGQPLSAGPLPGLAPSEFEARMMEYVKLLNKEIRSSASTPPRQGDLSPPSATSPLNPIEMSRMTLWNLYNNNQPPLEPQKEALNLSDASPPMVKREPEHRDSPPPAKKFIKDDNDHPVKMMAPSTNIKINSRGDARNGDNSLVVSMELNGVTYQGVLFAQATSAQNNTSAGRTLVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- iTF_00631925;
- 80% Identity
- -