Eden002387.1
Basic Information
- Insect
- Earota dentata
- Gene Symbol
- Su(H)
- Assembly
- GCA_027574905.2
- Location
- JAODGB020005880.1:2463-3444[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.56 5.8e+03 -2.5 0.0 73 99 108 135 97 154 0.56 2 3 1.2 1.2e+04 -3.5 0.0 24 44 183 203 174 207 0.45 3 3 2.9e-45 2.9e-41 140.6 0.0 1 83 221 303 221 303 0.99
Sequence Information
- Coding Sequence
- ATGCCACATCAGTACGGCCTGCCGGGCATCGCACACGCTCaatcgccgccgacgccgccgccgcaccatGGCGCGATGTATCCGCgcttcgccggcgccgtcgtgcccggcggcgtgcgcgaggaCCGCCGGCTCACGCGCGAGGCGATGGAGCGCTATCTGCGCGAGCGCTCCGACATGGTGATCGTCATCCTGCACGCCAAAGTCGCGCAGAAGTCCTACGGCAACGAGAAGCGCTTCTTCTGCCCGCCGCCGTGCATCTACCTCTTCGGCGATGGCTGGCGACTGCGGCAGGACCAGATGCTGCGCGAGGGCGAGTCCGAGCAGGCGTCGCAGTTGTGCGCGTTTATTGGCATTGGCAACTCCGACCAGGATATGCAGCAGCTCGACTTAAACAACGGCAAGCAATACTGTGCAGCCAAGACCTTGTATATATCAGATTCAGACAAGCGCAAGCACTTCATGCTGTCAGTGAAGATGTTCTATGGCTCTGGACAGGACATTGGTGTGTTCCACAGCAAGCGCATTAAAGTGATATCAAAACCATCCAAGAAGAAGCAGAGTCTGAAGAATGCCGACCTGTGCATTGCCAGCGGCACCAAGGTGGCGCTCTTTAACCGCCTCAGGTCGCAAACAGTGAGCACTAGGTACTTGCATGTGGAGAATGGACACTTTCATGCAAGCTCTACGCAATGGGGAGCTTTCACAATACATTTACTGGATGACAATGAGTCGGAGAGTGAAGAGTTTCAAGTGAGAGATGGGTACATTCACTATGGAAGTACTGTTAAGCTAGTTTGCTCAGTCACCGGCATGGCACTGCCGAGATTAATCATTCGAAAGGTGGACAAGCAACAAGCGCTGCTGGAAGCCGACGATCCCGTCTCGCAGCTGCACAAATGCGCGTTCTA
- Protein Sequence
- MPHQYGLPGIAHAQSPPTPPPHHGAMYPRFAGAVVPGGVREDRRLTREAMERYLRERSDMVIVILHAKVAQKSYGNEKRFFCPPPCIYLFGDGWRLRQDQMLREGESEQASQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGSGQDIGVFHSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGHFHASSTQWGAFTIHLLDDNESESEEFQVRDGYIHYGSTVKLVCSVTGMALPRLIIRKVDKQQALLEADDPVSQLHKCAF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01086067;
- 90% Identity
- iTF_00620352;
- 80% Identity
- -