Dlut006018.1
Basic Information
- Insect
- Dyspetes luteomarginatus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963669185.1
- Location
- OY769905.1:21948604-21951865[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2e-115 4.2e-111 371.1 31.1 1 300 29 327 29 327 0.97 2 3 0.0053 1e+02 2.1 2.7 122 171 327 376 326 380 0.91 3 3 0.052 9.9e+02 -1.1 5.7 194 238 358 401 346 402 0.58
Sequence Information
- Coding Sequence
- atggagTCGACTATAGCGGGACGAAGACGTAACGCTACGAGGCATTCTGCCGAGGATCAGGCACTCGACCAGATAGCCAAAGAGGCAGAAGCGAGACTTGCTGCTCGTAGACAGGCAAGAGCTGAAGCTCGTGAAATTCGTATGCGAGAATTAGAGAGACAACAAAAAGAGGCGGAAGAGAATGCTGATAGGGTCTACGATATGTGCTCAGCCGAAGGAAACAGAACGATGAGAGTCACGCCAGATCCTGTGAGAACGTCTCGTCTTCTtgcaaattcaaataattttcaatcaagcAGAAGATCGTCCGAGGATTCCTTGGAAGATGCTGGCCTAAGCAGAGATCTTAAATTAGAGCTCAAAGAATTTGAGGAAAAGTTTAGAAAAGCAATGATAGCAAATGCCCAATTggacaatgaaaaatcatcatacgGATATCAGGTCGATCTGTTGAAAGACAAATTGGAAGAGTTGGACGAGACAACGGCACAATTGAGACGCGAGcttagggaaaaaaatcgagaggcGGAACAGCTGAAACGCATAAGTCAACGATTAAAGGAAGATTTCGATGTATGCAGAGCTCAATTGTTGGAGAGGGACACGCTTATtcaggaaaatgGACTGGTCATAGTAGACGATGAAGGCAGTGGAGAGGAAGATACGGAATTGGCAAATGGATCTTGTTACAGGAAAAGAGTACTAGTCAGCACAGAAGCTGCCGAGCTATTGCAAAATGCTGGTGAAGGCTCGTTAGACGTTCGGTTGAGAAAATTTGCCTCTGAAAAGAAAGAACTCCAAGATGAAATTGGACATTTGAGGTTGGAGCTGGAAGAAGCAAAGAGTCGCCTGAGATCAGAAAAAACTCCAGGTTCCGTATTAGgtGGCCTTTCCGACTCTGAGGATGTGCAGAGAGAAGCGAACAAATTATTGGCGgattacaaatttaaattgcaaaaaGCCGAACAGGACATGTCAACGTTACAGGCGACTGTCGCGAGGCTAGAGAGCCAAGTTATACGTTACAAGTCGGCGGCCGAAGCATCGGAAAAAGCAGAGGATGAGCTCAAAGTCGAGAAGAGAAAATTGCAGAGAGAAgTCCGCGAATCGCAGGGTCGTGTCGAGGAGCTAGAAACGGCAAATTCTCACTTACAGAGACGACTGGATAAACTGAAAAATGCCAAGTCTGCGCTCCTTAAGGAGCTCTGA
- Protein Sequence
- MESTIAGRRRNATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSAEGNRTMRVTPDPVRTSRLLANSNNFQSSRRSSEDSLEDAGLSRDLKLELKEFEEKFRKAMIANAQLDNEKSSYGYQVDLLKDKLEELDETTAQLRRELREKNREAEQLKRISQRLKEDFDVCRAQLLERDTLIQENGLVIVDDEGSGEEDTELANGSCYRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIGHLRLELEEAKSRLRSEKTPGSVLGGLSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01102050;
- 80% Identity
- -