Dtri001041.1
Basic Information
- Insect
- Dysmachus trigonus
- Gene Symbol
- -
- Assembly
- GCA_949715965.1
- Location
- OX454319.1:9806645-9814024[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 4.4 8.4e+02 2.1 3.2 2 23 198 220 198 220 0.91 2 19 0.016 3.1 9.8 2.5 2 19 263 280 262 283 0.91 3 19 0.22 42 6.2 2.6 2 23 294 315 293 315 0.90 4 19 0.019 3.7 9.5 0.1 3 23 324 345 323 345 0.95 5 19 2.3e-05 0.0045 18.7 0.5 1 23 351 373 351 373 0.95 6 19 0.013 2.5 10.1 0.8 1 23 379 402 379 402 0.95 7 19 0.00013 0.026 16.3 2.9 1 23 407 429 407 429 0.98 8 19 0.4 78 5.4 0.7 3 23 440 460 438 460 0.93 9 19 0.0064 1.2 11.0 0.5 1 23 477 499 477 499 0.95 10 19 0.052 10 8.2 4.0 1 23 504 526 504 526 0.97 11 19 0.15 30 6.7 2.0 1 23 542 567 542 567 0.96 12 19 9e-05 0.017 16.8 0.1 1 23 573 596 573 596 0.94 13 19 0.0012 0.22 13.4 0.7 1 23 601 624 601 624 0.97 14 19 0.014 2.7 10.0 0.3 1 23 629 652 629 652 0.93 15 19 4.9e-05 0.0094 17.7 0.5 1 23 655 678 655 678 0.97 16 19 0.78 1.5e+02 4.5 3.3 1 23 684 707 684 707 0.87 17 19 0.021 4 9.4 0.3 1 23 713 735 713 735 0.98 18 19 3.8e-08 7.3e-06 27.5 1.1 1 23 741 763 741 763 0.99 19 19 0.06 12 8.0 0.1 3 23 769 792 768 792 0.95
Sequence Information
- Coding Sequence
- atgccgCCCCCGAAGAAGCGTGGTCGACCTCCAAAGGCGAAACCTGCGAAATGCGTTAGTTGCGCCGTCGATATGAAGGAGCCGTATCAACTCATTTTCGACGAGAGTGGAATTGAACTAGAGCTGAAAAAGTTGCTGTACACTTGCTTTGGGATGCGCATTGTAAAGGATAACAAGAAAATTCAGGCTCTCTGCGAGGAATGTCTCAATCGACTAATTGATGTCTTCGATGTTATGCAAAAGAAAACCCAGGATGAGCCCGGACCGTCCACGAAGTCCTCAGAACCTGCAGACTTGCAAGACGAGTTCGGCGATTCTGATCCCGAAAATGATGACCTGTACGAGGTCATTGAAGAACCAGAAATAATTAATGTTAAAGACTCAGATCTAACTGAGTTTGAGGAGGAGCCACAAGATGCAGCTAGTGATTTGTCGAACCATCCAGGCGATGACCAAAACGAAAATGCAGGTATTCGGGAATTTGAAAGTATTGATTACTTAGAAGATTTCGCTGAAGACATCGatattaaagaatataaaatcaaagtcctacaaaatacaattttatgcaTATTTCTTCCTGAAAGTGCTAAGTGTCGGtTATGTTCCGAAAGTTTTGAAAAACATGTTGATGTGTTAAATCATACCGAACACCAACATTGCGTTGAGGATTTTGCCTATCCTTGTGTAATTGACGAAAACTGTGAACCACAAAAATCCATGATGGACCTTTCGTTGCACATGGTTTTCAAGCATTATGATTTGGAAAAaTTAGTAATCTACACTCAGTGTCCTGAATGTGATAAGAGATTCAACAACTTCTTGCTATACAACAAACATTCATGTTATAGTGGTCCAAAGATTTCACGAAGTGCAACTGAGTGCGAAGCTTGTGATAAATCGTTCAAATCGAACAAGAGATATCGCTTCCATCAGAATTTCCATCAAGAAAAACGGCGTCCAAAAGCTTGTTTCATATGTGATCAGTTGTTTAGAGATGAAGATGAATTTTACGAGCATATTATGTATCAACATGAAAAAAACCTTGGCTTTATCTGTTTAAGttgCGACAAATCGTTCACTAAtgaggagaatttaaaaaaccatGAAAGTATACATAAAGTTGAGCGGCAGTATAGTTGTAAGCTTTGTAGCAAATCTTACCTCTATAATCAGCTTTTAAAGGATCATATGGTATCAGCTCACGGAACAAATCCTTTCAAATGCCACATTTGTGACAAATATCTGATTAAGAAAACACTTTTGAATAAGCACATTTTATCGCACAGTGTACCTCAAACAACTGAAGTTATGAGCTGCAGTTGTTGCGGGCTAGTTTTTGATAAATCTGAGGAAACTGCGGATCACATTAATAAGCACAATGAAAGTGATGAAGCAAGTGTTATAACTGAAGAACTTGATATAGCGTATTGTTGTGAGTATTGTGAGCTTGCATTCAATTCAATCGAGAACATGATCGCTCATCGAGATCTTCacgataaaaagaaatatttttgtgacTTATGTCCTCTGAGCTATTGCGAGTATAAAAAGTTGAAAACTCATAAATTGACTCATATTAACTATGTGGATAAAAGATATACTTTTCCAGTTACTAGACACTATGTTTGCGATTTTCCgGACTGTACGATGAGTTATTTGCAGTGGACTAGTCTTAGATCACACAAGAGGCACAAACATTGTAATCAGAAAAGTTTTCAATGCCCTAAATGTCCCGAAGGATTCATAGATGTggaaCAATATAAAAAACACATGGAAGATGTTCATAAAAGCACTGCCTTTAAAtgccaattttgcaacaaagaCTACGGCAATAAAATGGCTTTAGCGGTTCATATTTCCAGGAGGCATAACGCAAGTCGTTTTCAGTGCGATTTATGTGAACAAAGCTATGCGACAAAGGCTGTATTGGATAAGCATAAGACAAATGTTCACAGCACTTTCCCATGCAAGATTTGcgggaaaatattgaaaaatctaAAGAATTTCCAAGTCCATAGTAGAATGGTGCACGAAAAAGAGAAGAGGTATTTTTGCAAGTACTGCAACAAGGGCTATTTCAACAACTGTGACAAAGCTGAACACGAATCATCGgtgcatgaaaaaattaagaaatacgtATGTGACTTATGTCCATATTCAGCGGTATATAAAGAATGTTTAGTTGTTCATAAAAGAGCACACCAAAATGAAACGCCTTACAAATGTGAGCTCTGTGGTAAAGGTTTCCGTCGAAGTTATGCCCTACGGGTTCATATGAAGCGGCACTATAGTATTAAGgaTTGTCCCTATGAAGAATGTGAGGCTTCATTCGCAAATCAAGGAATCTTAAATTATCACATTAAAACGAAGCATGTAGAAGGTGCTAATAAAGAACCAAAAGCAAAGCGGAAGCGATTAGTTGGGGACGGTTATCAGCGTCCACGATATGAAAGGCAGTCTGCTGAATTCTTTgttgacgacgacgacggtttGGATGATGGTGTTATAGGGGAACCCAACAGTCAAGTGTTCCAAGAGGAAGAACAAGGTGAAAGTATGCCCGATGACAATGTTGAATATATTGTAAAAGATGACGAATCTGGTTCAGGCGTTGCCATGCAAAAAACTGAATCAGATCACAATTACATTGTTCGCGTAGATGACAACAAAGTTTATGGAAATGAAATTGAAGAAGTATTCGAAGTTGTTATGCaagatatataa
- Protein Sequence
- MPPPKKRGRPPKAKPAKCVSCAVDMKEPYQLIFDESGIELELKKLLYTCFGMRIVKDNKKIQALCEECLNRLIDVFDVMQKKTQDEPGPSTKSSEPADLQDEFGDSDPENDDLYEVIEEPEIINVKDSDLTEFEEEPQDAASDLSNHPGDDQNENAGIREFESIDYLEDFAEDIDIKEYKIKVLQNTILCIFLPESAKCRLCSESFEKHVDVLNHTEHQHCVEDFAYPCVIDENCEPQKSMMDLSLHMVFKHYDLEKLVIYTQCPECDKRFNNFLLYNKHSCYSGPKISRSATECEACDKSFKSNKRYRFHQNFHQEKRRPKACFICDQLFRDEDEFYEHIMYQHEKNLGFICLSCDKSFTNEENLKNHESIHKVERQYSCKLCSKSYLYNQLLKDHMVSAHGTNPFKCHICDKYLIKKTLLNKHILSHSVPQTTEVMSCSCCGLVFDKSEETADHINKHNESDEASVITEELDIAYCCEYCELAFNSIENMIAHRDLHDKKKYFCDLCPLSYCEYKKLKTHKLTHINYVDKRYTFPVTRHYVCDFPDCTMSYLQWTSLRSHKRHKHCNQKSFQCPKCPEGFIDVEQYKKHMEDVHKSTAFKCQFCNKDYGNKMALAVHISRRHNASRFQCDLCEQSYATKAVLDKHKTNVHSTFPCKICGKILKNLKNFQVHSRMVHEKEKRYFCKYCNKGYFNNCDKAEHESSVHEKIKKYVCDLCPYSAVYKECLVVHKRAHQNETPYKCELCGKGFRRSYALRVHMKRHYSIKDCPYEECEASFANQGILNYHIKTKHVEGANKEPKAKRKRLVGDGYQRPRYERQSAEFFVDDDDGLDDGVIGEPNSQVFQEEEQGESMPDDNVEYIVKDDESGSGVAMQKTESDHNYIVRVDDNKVYGNEIEEVFEVVMQDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00937497;
- 90% Identity
- -
- 80% Identity
- -