Dtit012737.1
Basic Information
- Insect
- Dynastes tityus
- Gene Symbol
- zfy1
- Assembly
- GCA_029618875.2
- Location
- JAROYD020000003.1:2516843-2518300[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 1.7 4.9e+03 -0.6 0.0 23 44 225 246 221 254 0.79 2 8 0.034 99 4.8 0.2 21 44 286 309 277 313 0.77 3 8 0.016 45 5.9 0.0 20 45 313 338 309 346 0.82 4 8 0.68 2e+03 0.6 0.1 22 45 343 366 338 373 0.74 5 8 0.01 30 6.5 0.1 21 44 370 393 366 398 0.88 6 8 0.0058 17 7.3 0.1 21 45 398 422 395 431 0.90 7 8 1.1 3.3e+03 -0.1 0.0 23 45 428 450 422 453 0.84 8 8 0.018 53 5.7 0.0 23 47 456 480 452 484 0.90
Sequence Information
- Coding Sequence
- ATGGCCACGGGATATGACGGGTTGCATGAACATTACGATGAGAACTATGAAAAGTATAATAGTCATgcagacattaaattagaagattttatAGCACAAACgggagattttcttgattcaaaagcaggaatatGTTCCATAAGTGACCATAACGTAGCAGAAGGTatcttattgaaaaatattaaagatgaaaatttaaatgagcAGTCGAACAAAGATGTTGGTCGTATTGAAAACTCTGAAAAATATAGTGACgcaaacattaaattagaaggCTTTATAGTCAAAGCGGAAGATTTTTGTGATTCAAAGGcaggaatatctttgataagtGAAGCCAACATAGCGCAAGGTGtctttttagaaaatgttaaagACAAGCAGTTAAACAAAGATGTTGATAGTGCTGAAAATTGGGAAATTGGTTTGAAAAAAATAGAGACCATCAAAGTAGAAACATGTGCGATAAATGAGAATATGCCAACACTGCATCAGGATCCATTACTAGAAGATAACCAAAGCCATGTAAAGTTGGAACTAAATAATGGATTAAGTTTAGAAGGGAATTCCAAACATACGTCTCAAGAAAATCCTAACGCTAGAATAGTTTTGTGCAAAAAATCTAACAGAATGTTTGATTACGGTGTTCAAGTCAATAACCATGCTGGAAATACTCCATACAAATGCGACATCTGTCACAAAGGTTTCATAACATCACACCTCCTTGAAAAACATAAACTTTTACATTCCGAGAGCACGCCATCCTCATACAAGATTCGTGGTCATACATGTGACTATTGTGGGCTGACATGTTATCGCATCTCAGATATGACTAAACATATTAgaacacacaccggtgaaaagccctttacttgcaaaatatgtaaaaaatcattttgtcgCAGGAGTGCACTGAAGCATCATATTAAAACGCACACcagtgaaaagccttttacctgcgaagtttgtaaaatgtcGTTTCATTGGAAGATTGGACTAATGAGACATATGAAAGAACACACCAAcaaaaagccttttacttgcgaggttTGTAAAACGTCGTTTTGTAAGAAAAGTGTACTGATGACTCATATTAGAATACACACCGGCGAGAAGCCGTTTACTTGCGGAGTTTGTAACATGTCGTTTCGTCAGAGGTGTGCGCTAATTGATCATATAAAGACACACACCGATGAAAGACCGTATACTTGTGAAGTTTGTAATAAGACATTTCGCGGCAGGAGTGGACTGAGGAATCATATTAAgacacacaccggtgaaaagtaTTTTGCTTGTGAAGTGTGTAAAGAGTCTTTTGGTTGGTCTTCAGGACTGAAAAGACATATGGCAGTGCATGTGGGAGATTGCCCTTATTCTTGTGACGTGTGTTCGGCTAAATTTAAGACCAAAAAGAGTTTAATACGGCATATGAAACTgcatattaaagaaaaagtctAA
- Protein Sequence
- MATGYDGLHEHYDENYEKYNSHADIKLEDFIAQTGDFLDSKAGICSISDHNVAEGILLKNIKDENLNEQSNKDVGRIENSEKYSDANIKLEGFIVKAEDFCDSKAGISLISEANIAQGVFLENVKDKQLNKDVDSAENWEIGLKKIETIKVETCAINENMPTLHQDPLLEDNQSHVKLELNNGLSLEGNSKHTSQENPNARIVLCKKSNRMFDYGVQVNNHAGNTPYKCDICHKGFITSHLLEKHKLLHSESTPSSYKIRGHTCDYCGLTCYRISDMTKHIRTHTGEKPFTCKICKKSFCRRSALKHHIKTHTSEKPFTCEVCKMSFHWKIGLMRHMKEHTNKKPFTCEVCKTSFCKKSVLMTHIRIHTGEKPFTCGVCNMSFRQRCALIDHIKTHTDERPYTCEVCNKTFRGRSGLRNHIKTHTGEKYFACEVCKESFGWSSGLKRHMAVHVGDCPYSCDVCSAKFKTKKSLIRHMKLHIKEKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00627561;
- 90% Identity
- iTF_00627561;
- 80% Identity
- iTF_00627561;