Basic Information

Insect: Dynastes tityus
Gene Symbol: -
Assembly: GCA_029618875.2
Location: JAROYD020000003.1:2331908-2333557[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 8 2.3e+04 -2.8 0.1 26 44 187 205 177 208 0.79

2 13 0.066 1.9e+02 3.9 0.1 21 44 210 233 204 237 0.89

3 13 0.015 44 5.9 0.1 21 45 238 262 233 265 0.88

4 13 0.023 66 5.4 0.0 20 45 265 290 254 297 0.83

5 13 0.79 2.3e+03 0.4 0.1 21 31 294 304 290 320 0.80

6 13 0.013 38 6.1 0.1 21 44 322 345 314 353 0.80

7 13 0.084 2.4e+02 3.6 0.0 17 46 346 375 338 381 0.75

8 13 0.011 32 6.4 0.1 21 48 378 405 374 409 0.86

9 13 0.27 7.7e+02 2.0 0.2 22 32 407 417 404 433 0.80

10 13 0.1 3e+02 3.3 0.0 21 46 434 459 430 467 0.77

11 13 0.64 1.9e+03 0.7 0.0 21 32 462 473 458 489 0.78

12 13 0.00013 0.37 12.6 0.0 21 46 490 515 486 519 0.91

13 13 0.12 3.6e+02 3.0 0.1 23 45 520 542 516 546 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	8	2.3e+04	-2.8	0.1	26	44	187	205	177	208	0.79
2	13	0.066	1.9e+02	3.9	0.1	21	44	210	233	204	237	0.89
3	13	0.015	44	5.9	0.1	21	45	238	262	233	265	0.88
4	13	0.023	66	5.4	0.0	20	45	265	290	254	297	0.83
5	13	0.79	2.3e+03	0.4	0.1	21	31	294	304	290	320	0.80
6	13	0.013	38	6.1	0.1	21	44	322	345	314	353	0.80
7	13	0.084	2.4e+02	3.6	0.0	17	46	346	375	338	381	0.75
8	13	0.011	32	6.4	0.1	21	48	378	405	374	409	0.86
9	13	0.27	7.7e+02	2.0	0.2	22	32	407	417	404	433	0.80
10	13	0.1	3e+02	3.3	0.0	21	46	434	459	430	467	0.77
11	13	0.64	1.9e+03	0.7	0.0	21	32	462	473	458	489	0.78
12	13	0.00013	0.37	12.6	0.0	21	46	490	515	486	519	0.91
13	13	0.12	3.6e+02	3.0	0.1	23	45	520	542	516	546	0.89

Sequence Information

Coding Sequence: ATGGCCGCAGAATGTGATAAGTTGCATGAACACGAACATTATGATAATAACTGTGAAGAATGTAAAAGTGACGCAGACGTTAAGTTAGAAGATTTTATAGTTCAAGGAGATTTTGCTGATTCAAAAACgggaatatctttgataagtGGCGCTAATGCAGCAGAAGATGTCTCATTGGACAATATTAAAGATGAAAATTTGGCCAAGCAGTTAAACAAAGGTGTTGGTAGTCCTGAAAACTTTGAAGGATATAATAGTGGCACAGACATTAAACTAGAAGATTTTGTAATTCAAACGGGAGATTTTCGTAattcaaaagcaggaatatctttgataagcGACCCCAATGCAACACAAGGTGtcttattggaaaatattaaaactgaaaatttgaaCGACCAATGCGACAAAAGTTTTAAACAGGAACATGAACTAGGAGCTGACAAGGTCTCTCATAAGCTCGATAAGAATGTTTTTTGTCCTCACTGCGGAAAATCGTTCGAGAAGAAGAAACTACATCATCATATTAGGAGCGTGCATCGGCTCAGGAAGGTTCACATGTGTAGATATTGCGGGCGGACGTTTCGTCGCAAGAACAATCTGATGGTACATATTAgaacacacaccggtgaaaagccgttttcttgtgaaatttgtaataaGTCATTTTGTGAGAAGGAAGGACTGAGAAAACATATTAgaacacacaccggtgaaaagccctatacttgcgaaatttgtaataagTCATTTTGTGCGCCGAATGGACTAAAGAGacatattaaaacacacaccggtgaaaagccttttacttgcgaaatttgtaaaaagccATTTTCTGACAAGGCCAACTTGACGActcatattaaaacacacaccggtgaaaggccttttacttgcgaagtttgtaaaaagtcgtTTATTGTGAAGTATGCACTAACGAATCATTTTAGAATACACACTGGTGAacagccttttacttgcgaaatttgtgAAAAGTCATTTTGTGGCAAGGATGGACTGaagaaacatattaaaaaacacaccggtgaaaagccttttacttgcgaggttTGTAAAAAGTCGTTTACTACGAAGCATGCACTGATGAATCATATTAGAATACACACTggcgaaaagccttttacttgcgagatctgtaaaaagtcatttagtGAGAAGTGTGGACTGACGAGACATATTAAAATACACtgcggtgaaaagccttttacttgtgaaatttgtaaaaagtcattttctcgGAAGAGTGTACTAGATATTCATGTTAAATGTCACACCGGTGAAAatccttttacttgcgaaatttgtaaaaagtcattttctcgCATTACCGGACTAAAACTTCATATTAAGTttcacaccggtgaaaagccttttacttgtgaggtttgtaaaaaatcatttacttGGAAGAGTGGTCTGACATGTCATATGAAAATACACACCGGCGAAAAACCTTTTActtgtgaaatttgtaaaaaatcatttggcTTCTCTAGAAGGCTAAGAAAACACATGGCAATGCATATGGGGGATTGCCCTTATTCTTGTGAGTTGTGTTCGGCTAAATTTACGAGTTTATCAAATCTAACGCGCCATATGAAGCAGCATATGAAAGAGGAAGTCTAA
Protein Sequence: MAAECDKLHEHEHYDNNCEECKSDADVKLEDFIVQGDFADSKTGISLISGANAAEDVSLDNIKDENLAKQLNKGVGSPENFEGYNSGTDIKLEDFVIQTGDFRNSKAGISLISDPNATQGVLLENIKTENLNDQCDKSFKQEHELGADKVSHKLDKNVFCPHCGKSFEKKKLHHHIRSVHRLRKVHMCRYCGRTFRRKNNLMVHIRTHTGEKPFSCEICNKSFCEKEGLRKHIRTHTGEKPYTCEICNKSFCAPNGLKRHIKTHTGEKPFTCEICKKPFSDKANLTTHIKTHTGERPFTCEVCKKSFIVKYALTNHFRIHTGEQPFTCEICEKSFCGKDGLKKHIKKHTGEKPFTCEVCKKSFTTKHALMNHIRIHTGEKPFTCEICKKSFSEKCGLTRHIKIHCGEKPFTCEICKKSFSRKSVLDIHVKCHTGENPFTCEICKKSFSRITGLKLHIKFHTGEKPFTCEVCKKSFTWKSGLTCHMKIHTGEKPFTCEICKKSFGFSRRLRKHMAMHMGDCPYSCELCSAKFTSLSNLTRHMKQHMKEEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00627448;
90% Identity: iTF_00627448;
80% Identity: iTF_00627448;