Basic Information

Insect: Dynastes tityus
Gene Symbol: -
Assembly: GCA_029618875.2
Location: JAROYD020000003.1:2574858-2576642[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.1 2.6e+04 -3.0 0.0 38 46 210 218 190 225 0.64

2 14 0.011 32 6.4 0.0 21 46 227 252 221 258 0.84

3 14 0.14 4.1e+02 2.8 0.1 21 44 255 278 251 282 0.88

4 14 0.014 41 6.0 0.1 21 45 283 307 279 311 0.88

5 14 0.17 4.9e+02 2.6 0.1 20 31 310 321 307 334 0.87

6 14 0.018 51 5.7 0.0 21 45 339 363 331 370 0.85

7 14 0.8 2.3e+03 0.4 0.1 21 31 367 377 363 389 0.85

8 14 0.35 1e+03 1.6 0.1 25 45 399 419 391 426 0.82

9 14 0.22 6.5e+02 2.2 0.0 21 44 423 446 419 450 0.82

10 14 0.054 1.6e+02 4.2 0.0 21 44 451 474 448 479 0.84

11 14 0.016 45 5.9 0.0 20 46 478 504 467 510 0.84

12 14 0.24 7e+02 2.1 0.1 21 32 507 518 503 533 0.76

13 14 0.046 1.3e+02 4.4 0.1 20 45 534 559 527 566 0.89

14 14 0.0011 3.3 9.6 0.1 23 45 565 587 561 593 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.1	2.6e+04	-3.0	0.0	38	46	210	218	190	225	0.64
2	14	0.011	32	6.4	0.0	21	46	227	252	221	258	0.84
3	14	0.14	4.1e+02	2.8	0.1	21	44	255	278	251	282	0.88
4	14	0.014	41	6.0	0.1	21	45	283	307	279	311	0.88
5	14	0.17	4.9e+02	2.6	0.1	20	31	310	321	307	334	0.87
6	14	0.018	51	5.7	0.0	21	45	339	363	331	370	0.85
7	14	0.8	2.3e+03	0.4	0.1	21	31	367	377	363	389	0.85
8	14	0.35	1e+03	1.6	0.1	25	45	399	419	391	426	0.82
9	14	0.22	6.5e+02	2.2	0.0	21	44	423	446	419	450	0.82
10	14	0.054	1.6e+02	4.2	0.0	21	44	451	474	448	479	0.84
11	14	0.016	45	5.9	0.0	20	46	478	504	467	510	0.84
12	14	0.24	7e+02	2.1	0.1	21	32	507	518	503	533	0.76
13	14	0.046	1.3e+02	4.4	0.1	20	45	534	559	527	566	0.89
14	14	0.0011	3.3	9.6	0.1	23	45	565	587	561	593	0.87

Sequence Information

Coding Sequence: ATGGCCACAGAATATAAGTTGCATGAACATTACGTAAATAATCGTGAAGAATATAATAACCACccagacattaaattagaagatttttTAGATTCAAAAGAaggaatatctttgataagtCTCCACAACGTAACACAAAGTGTCTTATTGGAAAATATCAAAGATGTTGGTAGTATTGAAAACGGTGAAAAATGTAATAGTGCCGCagatattaaattagaagattgtatagttcaaacgggagattttcttgattcaaaagcaggaatatGTTTGATAAGTGATCACAATGTAGCACAAGGTGTCTCATTGGGAAATAGTAATGTTGAAAATTCTGATAAGCAGTTAAGCAAAGATATCGTTAGCACTGAGAActgtgaaaaatataatagtgatgcagatattaaattagaagaatttATAGTTCAATCgggagattttcttgattcaaaagcaggaatatcATTGATAAGTGATCACAATGTAGCACAAGGTGTCTCATTGggaaatattaaagttgaaaattcgAATGACCAATGCAATAAAGGCTTTAAACACAAACAACTATATCATCGTATTAGGAGCGTGCATTTGTCCAAGAAGATTCACATGTGCGGATATTGCGGGCGGACGTTTCGTCGCCAGCTCGATCTGACGTTACATATTAgaacacacaccggtgaaaagccctTCACTTGCGAgatttgcaaaaagtcatttTCACAGAAGAGTGTATTGACGTCTCACCTTCGaacacacactggtgaaaagccttttacgtGTGAGacttgtaaaaagtcattttgtgCCAATAGTACACTGAGGAAACATATTAgaacacacaccggtgaaaagccttttacttgcgaggttTGTAAAAAGCCGTTTCGTCAGAAAAGTGCATTAACAATTCATATGCAAACACACACcagtgaaaagccttttacttgcgaggtttgtaaaaagtcatttgcTGGTAAGAGTGGACTGACGATTCATATGGTaaaacacactggtgaaaagccttttacttgcgaaatttgtaaaaagtcattttctgaCAAGAGTAACTTGATGACTCATGTTAGaaaacacaccggtgaaaagccttttacttgtgaagtttgtaaaaagtcattttatGAGAAGACCGTATTGACGATTCACACTCaaacacacaccggtgaaaagcttTTTAAGTGCGAGATATGTAAAACATCATATACTCAGAGGCATAATCTGACGATTCATATGAgaacacacaccggtgaaaagcctttcacttgcgaagtttgtaagAAGCCGTTTCTTGGGAAGTATGCATTAAAGAGGCATATTATAACACATgctggtgaaaagccttttacttgtgagATTTGTAATATGTCATATGCTGGGAAGCATGGACTGACAAGACATATGATaaaacacactggtgaaaagccttttacttgcgatatctgtaaaaagtcatttagtGATAAGTGTGTACTGAACAGacatattaaaacacacaccgatgaaaagccttttacttgcgaaatttgcGAAAAGTCATTTTCTCTGAAGGATGGACTAAAAGCTCACATTAAATATCACACCAGTGAAAAGCGTTTTActtgtgaaatttgtaaaatgGCATATTTCTGCTCTATAGATGTAAAAAGACATATGGCAGTACATATGGGGGATTGCCCGTATTCTTGTGAGTTGTGTTCCGCTAAATTTAAGAATTCACGCAGTCTAACACGGCATATGAAGCAGCATCTTAAAAAGGAAGTCTAA
Protein Sequence: MATEYKLHEHYVNNREEYNNHPDIKLEDFLDSKEGISLISLHNVTQSVLLENIKDVGSIENGEKCNSAADIKLEDCIVQTGDFLDSKAGICLISDHNVAQGVSLGNSNVENSDKQLSKDIVSTENCEKYNSDADIKLEEFIVQSGDFLDSKAGISLISDHNVAQGVSLGNIKVENSNDQCNKGFKHKQLYHRIRSVHLSKKIHMCGYCGRTFRRQLDLTLHIRTHTGEKPFTCEICKKSFSQKSVLTSHLRTHTGEKPFTCETCKKSFCANSTLRKHIRTHTGEKPFTCEVCKKPFRQKSALTIHMQTHTSEKPFTCEVCKKSFAGKSGLTIHMVKHTGEKPFTCEICKKSFSDKSNLMTHVRKHTGEKPFTCEVCKKSFYEKTVLTIHTQTHTGEKLFKCEICKTSYTQRHNLTIHMRTHTGEKPFTCEVCKKPFLGKYALKRHIITHAGEKPFTCEICNMSYAGKHGLTRHMIKHTGEKPFTCDICKKSFSDKCVLNRHIKTHTDEKPFTCEICEKSFSLKDGLKAHIKYHTSEKRFTCEICKMAYFCSIDVKRHMAVHMGDCPYSCELCSAKFKNSRSLTRHMKQHLKKEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00627447;
90% Identity: iTF_00627447;
80% Identity: iTF_00627447;